RNA–Protein interactions for RNA: ENST00000623495.1

LETMD1-238, Transcript of LETM1 domain containing 1, human

Gene LETMD1, Length 2,948 nt, Biotype TEC.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-238	ENST00000623495	C16orf59	Q7L2K0	433 aa		7.78	□□□□□ -1.16
LETMD1-238	ENST00000623495	UBE2Q1	Q7Z7E8	422 aa		7.78	□□□□□ -1.16
LETMD1-238	ENST00000623495	ELMO3	Q96BJ8	720 aa		7.78	□□□□□ -1.16
LETMD1-238	ENST00000623495	TSC22D3	Q99576	134 aa		7.78	□□□□□ -1.16
LETMD1-238	ENST00000623495	YIPF2	Q9BWQ6	316 aa		7.78	□□□□□ -1.16
LETMD1-238	ENST00000623495	FGFBP2	Q9BYJ0	223 aa		7.78	□□□□□ -1.16
LETMD1-238	ENST00000623495	FAM117A	Q9C073	453 aa		7.78	□□□□□ -1.16
LETMD1-238	ENST00000623495	BLOC1S4	Q9NUP1	217 aa		7.78	□□□□□ -1.16
LETMD1-238	ENST00000623495	MYH7B	A7E2Y1	1941 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	LRRIQ3	A6PVS8	624 aa	Predicted RBP	7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	CLIC2	O15247	247 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	MAGEB2	O15479	319 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	CD4	P01730	458 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	DNAJB2	P25686	324 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	NPTX2	P47972	431 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	STX17	P56962	302 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	GNG11	P61952	73 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	PTK7	Q13308	1070 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	CRELD2	Q6UXH1	353 aa	Predicted RBP	7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	TMC6	Q7Z403	805 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	ZBTB8OS	Q8IWT0	167 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	DHX40	Q8IX18	779 aa	Known RBP	7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	CCDC155	Q8N6L0	562 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	CCHCR1	Q8TD31	782 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	SEPT8	Q92599	483 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	RAD54L	Q92698	747 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	ZFP42	Q96MM3	310 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	PNKP	Q96T60	521 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	TUFT1	Q9NNX1	390 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	RCOR1	Q9UKL0	485 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	PRG3	Q9Y2Y8	225 aa	Predicted RBP	7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	PCDHA2	Q9Y5H9	948 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	TRPV2	Q9Y5S1	764 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	SPTBN5	Q9NRC6	3674 aa	Known RBP	7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	PLXNA1	Q9UIW2	1896 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	PARP14	Q460N5	1801 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	KDM3A	Q9Y4C1	1321 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	IGKV6D-21	A0A0A0MT36	114 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	LCHN	A4D1U4	455 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	C2CD2L	O14523	706 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	NDUFAB1	O14561	156 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	ZC3H11A	O75152	810 aa	Known RBP eCLIP	7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	MAF	O75444	373 aa	Predicted RBP	7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	LUC7L3	O95232	432 aa	Known RBP	7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	EYA4	O95677	639 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	CA3	P07451	260 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	RPSA	P08865	295 aa	Known RBP	7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	CYP11B2	P19099	503 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	MAPK6	Q16659	721 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	SKIDA1	Q1XH10	827 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	NAALADL2	Q58DX5	795 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	LMBRD2	Q68DH5	695 aa	Predicted RBP	7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	C11orf57	Q6ZUT1	292 aa	Predicted RBP	7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	FAM228A	Q86W67	206 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	FAM114A1	Q8IWE2	563 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	ARPC5L	Q9BPX5	153 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	YIPF3	Q9GZM5	350 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	PANK4	Q9NVE7	773 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	UTP6	Q9NYH9	597 aa	Known RBP	7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	LARS	Q9P2J5	1176 aa	Known RBP	7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	TPX2	Q9ULW0	747 aa	Known RBP	7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	TTC28	Q96AY4	2481 aa		7.77	□□□□□ -1.17
LETMD1-238	ENST00000623495	ADGRA3	Q8IWK6	1321 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	ARHGAP6	O43182	974 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	MGRN1	O60291	552 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	MGEA5	O60502	916 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	NPTXR	O95502	500 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	PHKA2	P46019	1235 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	ACOT2	P49753	483 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	CYP2J2	P51589	502 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	GNGT1	P63211	74 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	STRN3	Q13033	797 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	USP4	Q13107	963 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	DYNC1I2	Q13409	638 aa	Known RBP	7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	ARSH	Q5FYA8	562 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	FBXO47	Q5MNV8	452 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	ADAL	Q6DHV7	355 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	B3GNT9	Q6UX72	402 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	KIRREL3	Q8IZU9	778 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	FUK	Q8N0W3	1084 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	MCPH1	Q8NEM0	835 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	TOX2	Q96NM4	488 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	POLR3C	Q9BUI4	534 aa	Predicted RBP	7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	EIF2A	Q9BY44	585 aa	Known RBP	7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	NXF3	Q9H4D5	531 aa	Known RBP	7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	SLC28A3	Q9HAS3	691 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	PARVG	Q9HBI0	331 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	HPCAL4	Q9UM19	191 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	TET1	Q8NFU7	2136 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	TBKBP1	A7MCY6	615 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	PRKCB	P05771	671 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	ZNF24	P17028	368 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	LIG4	P49917	911 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	CASP5	P51878	434 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	SKOR1	P84550	965 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	PPIG	Q13427	754 aa	Known RBP eCLIP	7.76	□□□□□ -1.17	7e-6	■□□□□ 9.9
LETMD1-238	ENST00000623495	PRPF4B	Q13523	1007 aa	Known RBP	7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	ZNF568	Q3ZCX4	644 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	TMEM240	Q5SV17	173 aa		7.76	□□□□□ -1.17
LETMD1-238	ENST00000623495	GPIHBP1	Q8IV16	184 aa		7.76	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms