RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 ATF7P17544 494 aaPredicted RBP16.78■□□□□ 0.28
NPHP4-211ENST00000622020 TAC1P20366 129 aa16.78■□□□□ 0.28
NPHP4-211ENST00000622020 TAS2R40P59535 323 aa16.78■□□□□ 0.28
NPHP4-211ENST00000622020 ATP11AP98196 1134 aa16.78■□□□□ 0.28
NPHP4-211ENST00000622020 ARHGEF18Q6ZSZ5 1173 aa16.78■□□□□ 0.28
NPHP4-211ENST00000622020 SV2AQ7L0J3 742 aa16.78■□□□□ 0.28
NPHP4-211ENST00000622020 FAXDC2Q96IV6 333 aa16.78■□□□□ 0.28
NPHP4-211ENST00000622020 PLVAPQ9BX97 442 aa16.78■□□□□ 0.28
NPHP4-211ENST00000622020 C10orf88Q9H8K7 445 aa16.78■□□□□ 0.28
NPHP4-211ENST00000622020 TCEAL9Q9UHQ7 104 aa16.78■□□□□ 0.28
NPHP4-211ENST00000622020 MROH7Q68CQ1 1323 aa16.77■□□□□ 0.28
NPHP4-211ENST00000622020 EXOC1LA0A1B0GW35 172 aa16.77■□□□□ 0.28
NPHP4-211ENST00000622020 ECE2O60344 883 aa16.77■□□□□ 0.28
NPHP4-211ENST00000622020 GRIN3BO60391 1043 aa16.77■□□□□ 0.28
NPHP4-211ENST00000622020 LACTBP83111 547 aaPredicted RBP16.77■□□□□ 0.28
NPHP4-211ENST00000622020 CRYMQ14894 314 aa16.77■□□□□ 0.28
NPHP4-211ENST00000622020 PARD3BQ8TEW8 1205 aa16.77■□□□□ 0.28
NPHP4-211ENST00000622020 MXRA8Q9BRK3 442 aa16.77■□□□□ 0.28
NPHP4-211ENST00000622020 TRAIPQ9BWF2 469 aa16.77■□□□□ 0.28
NPHP4-211ENST00000622020 TRIM6Q9C030 488 aaPredicted RBP16.77■□□□□ 0.28
NPHP4-211ENST00000622020 FHDC1Q9C0D6 1143 aaPredicted RBP16.77■□□□□ 0.28
NPHP4-211ENST00000622020 UVRAGQ9P2Y5 699 aa16.77■□□□□ 0.28
NPHP4-211ENST00000622020 ZMYND8Q9ULU4 1186 aaPredicted RBP16.77■□□□□ 0.28
NPHP4-211ENST00000622020 DENND3A2RUS2 1198 aa16.77■□□□□ 0.27
NPHP4-211ENST00000622020 UBE4BO95155 1302 aa16.77■□□□□ 0.27
NPHP4-211ENST00000622020 CBX6O95503 412 aa16.77■□□□□ 0.27
NPHP4-211ENST00000622020 TCF4P15884 667 aa16.77■□□□□ 0.27
NPHP4-211ENST00000622020 ATP5DP30049 168 aa16.77■□□□□ 0.27
NPHP4-211ENST00000622020 CRELD2Q6UXH1 353 aaPredicted RBP16.77■□□□□ 0.27
NPHP4-211ENST00000622020 FBXL13Q8NEE6 735 aa16.77■□□□□ 0.27
NPHP4-211ENST00000622020 DDX1Q92499 740 aaKnown RBP16.77■□□□□ 0.27
NPHP4-211ENST00000622020 IFT74Q96LB3 600 aa16.77■□□□□ 0.27
NPHP4-211ENST00000622020 FAM213AQ9BRX8 229 aa16.77■□□□□ 0.27
NPHP4-211ENST00000622020 ALG13Q9NP73 1137 aaKnown RBP16.77■□□□□ 0.27
NPHP4-211ENST00000622020 ARHGEF3Q9NR81 526 aa16.77■□□□□ 0.27
NPHP4-211ENST00000622020 IFNB1P01574 187 aa16.76■□□□□ 0.27
NPHP4-211ENST00000622020 P4HBP07237 508 aaKnown RBP16.76■□□□□ 0.27
NPHP4-211ENST00000622020 RIPK1Q13546 671 aa16.76■□□□□ 0.27
NPHP4-211ENST00000622020 ZNF568Q3ZCX4 644 aa16.76■□□□□ 0.27
NPHP4-211ENST00000622020 NAIF1Q69YI7 327 aaPredicted RBP16.76■□□□□ 0.27
NPHP4-211ENST00000622020 ATL2Q8NHH9 583 aa16.76■□□□□ 0.27
NPHP4-211ENST00000622020 UTP4Q969X6 686 aaKnown RBP16.76■□□□□ 0.27
NPHP4-211ENST00000622020 VPS37BQ9H9H4 285 aa16.76■□□□□ 0.27
NPHP4-211ENST00000622020 PKN2Q16513 984 aaKnown RBP16.76■□□□□ 0.27
NPHP4-211ENST00000622020 AOC3Q16853 763 aa16.76■□□□□ 0.27
NPHP4-211ENST00000622020 ANKRD20A2Q5SQ80 823 aa16.76■□□□□ 0.27
NPHP4-211ENST00000622020 ANKRD20A1Q5TYW2 823 aa16.76■□□□□ 0.27
NPHP4-211ENST00000622020 ANKRD20A3Q5VUR7 823 aa16.76■□□□□ 0.27
NPHP4-211ENST00000622020 KIFAP3Q92845 792 aa16.76■□□□□ 0.27
NPHP4-211ENST00000622020 IDI2Q9BXS1 227 aa16.76■□□□□ 0.27
NPHP4-211ENST00000622020 ATP9AO75110 1047 aa16.75■□□□□ 0.27
NPHP4-211ENST00000622020 CDH16O75309 829 aa16.75■□□□□ 0.27
NPHP4-211ENST00000622020 ATP2A2P16615 1042 aaKnown RBP16.75■□□□□ 0.27
NPHP4-211ENST00000622020 BICD1Q96G01 975 aa16.75■□□□□ 0.27
NPHP4-211ENST00000622020 KLF6Q99612 283 aaPredicted RBP16.75■□□□□ 0.27
NPHP4-211ENST00000622020 CCPG1Q9ULG6 757 aa16.75■□□□□ 0.27
NPHP4-211ENST00000622020 PHTF1Q9UMS5 762 aa16.75■□□□□ 0.27
NPHP4-211ENST00000622020 MRPL11Q9Y3B7 192 aaKnown RBP16.75■□□□□ 0.27
NPHP4-211ENST00000622020 GOLGA8RI6L899 631 aa16.75■□□□□ 0.27
NPHP4-211ENST00000622020 MAGEA4P43358 317 aa16.75■□□□□ 0.27
NPHP4-211ENST00000622020 QARSP47897 775 aaKnown RBP16.75■□□□□ 0.27
NPHP4-211ENST00000622020 NOP14P78316 857 aaKnown RBP16.75■□□□□ 0.27
NPHP4-211ENST00000622020 PLCB3Q01970 1234 aa16.75■□□□□ 0.27
NPHP4-211ENST00000622020 CLEC16AQ2KHT3 1053 aa16.75■□□□□ 0.27
NPHP4-211ENST00000622020 DACT2Q5SW24 774 aa16.75■□□□□ 0.27
NPHP4-211ENST00000622020 ANKMY2Q8IV38 441 aa16.75■□□□□ 0.27
NPHP4-211ENST00000622020 MCOLN2Q8IZK6 566 aa16.75■□□□□ 0.27
NPHP4-211ENST00000622020 C12orf50Q8NA57 414 aaPredicted RBP16.75■□□□□ 0.27
NPHP4-211ENST00000622020 MAGEB18Q96M61 343 aa16.75■□□□□ 0.27
NPHP4-211ENST00000622020 KCND2Q9NZV8 630 aa16.75■□□□□ 0.27
NPHP4-211ENST00000622020 PRKAG3Q9UGI9 489 aa16.75■□□□□ 0.27
NPHP4-211ENST00000622020 GRID1Q9ULK0 1009 aa16.75■□□□□ 0.27
NPHP4-211ENST00000622020 ZNF148Q9UQR1 794 aa16.75■□□□□ 0.27
NPHP4-211ENST00000622020 A0A1W2PPM1 405 aa16.75■□□□□ 0.27
NPHP4-211ENST00000622020 MTA2O94776 668 aa16.75■□□□□ 0.27
NPHP4-211ENST00000622020 CCND1P24385 295 aa16.75■□□□□ 0.27
NPHP4-211ENST00000622020 RPA3P35244 121 aaPredicted RBP16.75■□□□□ 0.27
NPHP4-211ENST00000622020 NSFP46459 744 aaKnown RBP16.75■□□□□ 0.27
NPHP4-211ENST00000622020 ERFP50548 548 aa16.75■□□□□ 0.27
NPHP4-211ENST00000622020 SESN3P58005 492 aa16.75■□□□□ 0.27
NPHP4-211ENST00000622020 STRN3Q13033 797 aa16.75■□□□□ 0.27
NPHP4-211ENST00000622020 PTK6Q13882 451 aa16.75■□□□□ 0.27
NPHP4-211ENST00000622020 MTFR1Q15390 333 aa16.75■□□□□ 0.27
NPHP4-211ENST00000622020 MIS18BP1Q6P0N0 1132 aa16.75■□□□□ 0.27
NPHP4-211ENST00000622020 PODNQ7Z5L7 613 aa16.75■□□□□ 0.27
NPHP4-211ENST00000622020 DDX27Q96GQ7 796 aaKnown RBP16.75■□□□□ 0.27
NPHP4-211ENST00000622020 FOCADQ5VW36 1801 aa16.74■□□□□ 0.27
NPHP4-211ENST00000622020 CA4P22748 312 aa16.74■□□□□ 0.27
NPHP4-211ENST00000622020 GCKP35557 465 aa16.74■□□□□ 0.27
NPHP4-211ENST00000622020 IL9RQ01113 521 aa16.74■□□□□ 0.27
NPHP4-211ENST00000622020 OVGP1Q12889 678 aa16.74■□□□□ 0.27
NPHP4-211ENST00000622020 GBP7Q8N8V2 638 aaPredicted RBP16.74■□□□□ 0.27
NPHP4-211ENST00000622020 MORC4Q8TE76 937 aa16.74■□□□□ 0.27
NPHP4-211ENST00000622020 FBF1Q8TES7 1133 aa16.74■□□□□ 0.27
NPHP4-211ENST00000622020 CCDC77Q9BR77 488 aa16.74■□□□□ 0.27
NPHP4-211ENST00000622020 KIAA1683Q9H0B3 1180 aa16.74■□□□□ 0.27
NPHP4-211ENST00000622020 DCTN4Q9UJW0 460 aa16.74■□□□□ 0.27
NPHP4-211ENST00000622020 TBX20Q9UMR3 447 aa16.74■□□□□ 0.27
NPHP4-211ENST00000622020 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.74■□□□□ 0.27
NPHP4-211ENST00000622020 SPATA31A6Q5VVP1 1343 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms