RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 NOMO2Q5JPE7 1267 aa5.92□□□□□ -1.46
BRCA1-229ENST00000621897 LCORLQ8N3X6 602 aa5.92□□□□□ -1.46
BRCA1-229ENST00000621897 TMX3Q96JJ7 454 aa5.92□□□□□ -1.46
BRCA1-229ENST00000621897 ALOXE3Q9BYJ1 711 aa5.92□□□□□ -1.46
BRCA1-229ENST00000621897 C11orf54Q9H0W9 315 aaPredicted RBP5.92□□□□□ -1.46
BRCA1-229ENST00000621897 TOR3AQ9H497 397 aa5.92□□□□□ -1.46
BRCA1-229ENST00000621897 SERPINB13Q9UIV8 391 aa5.92□□□□□ -1.46
BRCA1-229ENST00000621897 EPN1Q9Y6I3 576 aaPredicted RBP5.92□□□□□ -1.46
BRCA1-229ENST00000621897 TNKSO95271 1327 aa5.92□□□□□ -1.46
BRCA1-229ENST00000621897 SHTN1A0MZ66 631 aa5.91□□□□□ -1.46
BRCA1-229ENST00000621897 CDHR4A6H8M9 788 aa5.91□□□□□ -1.46
BRCA1-229ENST00000621897 ZFPL1O95159 310 aa5.91□□□□□ -1.46
BRCA1-229ENST00000621897 SBK3P0C264 359 aa5.91□□□□□ -1.46
BRCA1-229ENST00000621897 CXADRP78310 365 aa5.91□□□□□ -1.46
BRCA1-229ENST00000621897 SLFN5Q08AF3 891 aa5.91□□□□□ -1.46
BRCA1-229ENST00000621897 FOXI1Q12951 378 aa5.91□□□□□ -1.46
BRCA1-229ENST00000621897 ODF1Q14990 250 aa5.91□□□□□ -1.46
BRCA1-229ENST00000621897 DACT2Q5SW24 774 aa5.91□□□□□ -1.46
BRCA1-229ENST00000621897 MIGA2Q7L4E1 593 aa5.91□□□□□ -1.46
BRCA1-229ENST00000621897 GPR149Q86SP6 731 aa5.91□□□□□ -1.46
BRCA1-229ENST00000621897 IFI44Q8TCB0 444 aa5.91□□□□□ -1.46
BRCA1-229ENST00000621897 LINC00476Q8WZB0 136 aa5.91□□□□□ -1.46
BRCA1-229ENST00000621897 KAT5Q92993 513 aa5.91□□□□□ -1.46
BRCA1-229ENST00000621897 NACC2Q96BF6 587 aa5.91□□□□□ -1.46
BRCA1-229ENST00000621897 ZG16BQ96DA0 208 aa5.91□□□□□ -1.46
BRCA1-229ENST00000621897 RNF31Q96EP0 1072 aa5.91□□□□□ -1.46
BRCA1-229ENST00000621897 MARS2Q96GW9 593 aaKnown RBP5.91□□□□□ -1.46
BRCA1-229ENST00000621897 REXO4Q9GZR2 422 aaKnown RBP5.91□□□□□ -1.46
BRCA1-229ENST00000621897 RNPEPQ9H4A4 650 aa5.91□□□□□ -1.46
BRCA1-229ENST00000621897 HSFX1Q9UBD0 423 aa5.91□□□□□ -1.46
BRCA1-229ENST00000621897 SAP30BPQ9UHR5 308 aaKnown RBP5.91□□□□□ -1.46
BRCA1-229ENST00000621897 WASHC2CQ9Y4E1 1318 aa5.91□□□□□ -1.46
BRCA1-229ENST00000621897 CCDC154A6NI56 674 aa5.9□□□□□ -1.46
BRCA1-229ENST00000621897 GPANK1O95872 356 aa5.9□□□□□ -1.46
BRCA1-229ENST00000621897 LMNAP02545 664 aaKnown RBP5.9□□□□□ -1.46
BRCA1-229ENST00000621897 ITGAMP11215 1152 aa5.9□□□□□ -1.46
BRCA1-229ENST00000621897 ADRA1BP35368 520 aa5.9□□□□□ -1.46
BRCA1-229ENST00000621897 SLC16A1P53985 500 aa5.9□□□□□ -1.46
BRCA1-229ENST00000621897 NANOS3P60323 173 aaKnown RBP5.9□□□□□ -1.46
BRCA1-229ENST00000621897 KRT85P78386 507 aa5.9□□□□□ -1.46
BRCA1-229ENST00000621897 CDC42EP1Q00587 391 aa5.9□□□□□ -1.46
BRCA1-229ENST00000621897 KIF23Q02241 960 aaPredicted RBP5.9□□□□□ -1.46
BRCA1-229ENST00000621897 ABHD17BQ5VST6 288 aa5.9□□□□□ -1.46
BRCA1-229ENST00000621897 FITM2Q8N6M3 262 aa5.9□□□□□ -1.46
BRCA1-229ENST00000621897 TBC1D15Q8TC07 691 aa5.9□□□□□ -1.46
BRCA1-229ENST00000621897 HDAC10Q969S8 669 aa5.9□□□□□ -1.46
BRCA1-229ENST00000621897 COA7Q96BR5 231 aa5.9□□□□□ -1.46
BRCA1-229ENST00000621897 PCDH12Q9NPG4 1184 aa5.9□□□□□ -1.46
BRCA1-229ENST00000621897 TDP1Q9NUW8 608 aa5.9□□□□□ -1.46
BRCA1-229ENST00000621897 RNF181Q9P0P0 153 aa5.9□□□□□ -1.46
BRCA1-229ENST00000621897 COL4A3BPQ9Y5P4 624 aa5.9□□□□□ -1.46
BRCA1-229ENST00000621897 NOX1Q9Y5S8 564 aa5.9□□□□□ -1.46
BRCA1-229ENST00000621897 ALG1L2C9J202 215 aa5.89□□□□□ -1.47
BRCA1-229ENST00000621897 RHOBTB3O94955 611 aa5.89□□□□□ -1.47
BRCA1-229ENST00000621897 FOSP01100 380 aaPredicted RBP5.89□□□□□ -1.47
BRCA1-229ENST00000621897 CKBP12277 381 aa5.89□□□□□ -1.47
BRCA1-229ENST00000621897 FCER1AP12319 257 aa5.89□□□□□ -1.47
BRCA1-229ENST00000621897 ALAS1P13196 640 aa5.89□□□□□ -1.47
BRCA1-229ENST00000621897 BMP5P22003 454 aa5.89□□□□□ -1.47
BRCA1-229ENST00000621897 TGM1P22735 817 aa5.89□□□□□ -1.47
BRCA1-229ENST00000621897 SEC24CP53992 1094 aa5.89□□□□□ -1.47
BRCA1-229ENST00000621897 USP14P54578 494 aa5.89□□□□□ -1.47
BRCA1-229ENST00000621897 ZNF280AP59817 542 aaPredicted RBP5.89□□□□□ -1.47
BRCA1-229ENST00000621897 CREMQ03060 361 aa5.89□□□□□ -1.47
BRCA1-229ENST00000621897 TAP1Q03518 808 aa5.89□□□□□ -1.47
BRCA1-229ENST00000621897 PTPN21Q16825 1174 aa5.89□□□□□ -1.47
BRCA1-229ENST00000621897 RSPH3Q86UC2 560 aa5.89□□□□□ -1.47
BRCA1-229ENST00000621897 SUPT20HQ8NEM7 779 aa5.89□□□□□ -1.47
BRCA1-229ENST00000621897 MRGPRX4Q96LA9 322 aa5.89□□□□□ -1.47
BRCA1-229ENST00000621897 DMRTA2Q96SC8 542 aa5.89□□□□□ -1.47
BRCA1-229ENST00000621897 SMAD5Q99717 465 aaKnown RBP5.89□□□□□ -1.47
BRCA1-229ENST00000621897 ASPSCR1Q9BZE9 553 aa5.89□□□□□ -1.47
BRCA1-229ENST00000621897 SYNPO2LQ9H987 977 aa5.89□□□□□ -1.47
BRCA1-229ENST00000621897 TMEM74BQ9NUR3 256 aa5.89□□□□□ -1.47
BRCA1-229ENST00000621897 PCDHB1Q9Y5F3 818 aa5.89□□□□□ -1.47
BRCA1-229ENST00000621897 GRM6O15303 877 aa5.88□□□□□ -1.47
BRCA1-229ENST00000621897 ZRANB2O95218 330 aaKnown RBP eCLIP5.88□□□□□ -1.47
BRCA1-229ENST00000621897 HKR1P10072 659 aa5.88□□□□□ -1.47
BRCA1-229ENST00000621897 TYRP1P17643 537 aa5.88□□□□□ -1.47
BRCA1-229ENST00000621897 PLA2G5P39877 138 aa5.88□□□□□ -1.47
BRCA1-229ENST00000621897 MXRA7P84157 204 aa5.88□□□□□ -1.47
BRCA1-229ENST00000621897 CYP2A13Q16696 494 aa5.88□□□□□ -1.47
BRCA1-229ENST00000621897 SPDYE7PQ495Y7 208 aa5.88□□□□□ -1.47
BRCA1-229ENST00000621897 FLYWCH1Q4VC44 716 aa5.88□□□□□ -1.47
BRCA1-229ENST00000621897 ARMC6Q6NXE6 501 aa5.88□□□□□ -1.47
BRCA1-229ENST00000621897 OLFML1Q6UWY5 402 aa5.88□□□□□ -1.47
BRCA1-229ENST00000621897 PNMA8AQ86V59 439 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-229ENST00000621897 SLC44A3Q8N4M1 653 aa5.88□□□□□ -1.47
BRCA1-229ENST00000621897 NUP133Q8WUM0 1156 aa5.88□□□□□ -1.47
BRCA1-229ENST00000621897 CAVIN3Q969G5 261 aa5.88□□□□□ -1.47
BRCA1-229ENST00000621897 FUBP1Q96AE4 644 aaKnown RBP5.88□□□□□ -1.47
BRCA1-229ENST00000621897 BOD1Q96IK1 185 aa5.88□□□□□ -1.47
BRCA1-229ENST00000621897 COQ10AQ96MF6 247 aa5.88□□□□□ -1.47
BRCA1-229ENST00000621897 TLR10Q9BXR5 811 aa5.88□□□□□ -1.47
BRCA1-229ENST00000621897 VSX1Q9NZR4 365 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-229ENST00000621897 KCNE5Q9UJ90 142 aa5.88□□□□□ -1.47
BRCA1-229ENST00000621897 SGTAO43765 313 aa5.87□□□□□ -1.47
BRCA1-229ENST00000621897 HAUS5O94927 633 aa5.87□□□□□ -1.47
BRCA1-229ENST00000621897 AVPR1BP47901 424 aa5.87□□□□□ -1.47
BRCA1-229ENST00000621897 DNAJC10Q8IXB1 793 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms