RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 EIF4BP23588 611 aaKnown RBP23.04■■□□□ 1.28
SPAST-204ENST00000621856 VEGFBP49765 207 aa23.04■■□□□ 1.28
SPAST-204ENST00000621856 GALCP54803 685 aa23.04■■□□□ 1.28
SPAST-204ENST00000621856 MYL6P60660 151 aa23.04■■□□□ 1.28
SPAST-204ENST00000621856 NKX3-2P78367 333 aa23.04■■□□□ 1.28
SPAST-204ENST00000621856 SGSM1Q2NKQ1 1148 aa23.04■■□□□ 1.28
SPAST-204ENST00000621856 FAM47CQ5HY64 1035 aa23.04■■□□□ 1.28
SPAST-204ENST00000621856 JADE1Q6IE81 842 aa23.04■■□□□ 1.28
SPAST-204ENST00000621856 RAET1EQ8TD07 263 aa23.04■■□□□ 1.28
SPAST-204ENST00000621856 CCDC94Q9BW85 323 aaPredicted RBP23.04■■□□□ 1.28
SPAST-204ENST00000621856 ACP6Q9NPH0 428 aa23.04■■□□□ 1.28
SPAST-204ENST00000621856 JRKLQ9Y4A0 524 aa23.04■■□□□ 1.28
SPAST-204ENST00000621856 PCDHB4Q9Y5E5 795 aa23.04■■□□□ 1.28
SPAST-204ENST00000621856 UMODL1Q5DID0 1318 aa23.04■■□□□ 1.28
SPAST-204ENST00000621856 NFICP08651 508 aa23.03■■□□□ 1.28
SPAST-204ENST00000621856 CHRNB2P17787 502 aa23.03■■□□□ 1.28
SPAST-204ENST00000621856 GRM5P41594 1212 aa23.03■■□□□ 1.28
SPAST-204ENST00000621856 NOP2P46087 812 aaKnown RBP23.03■■□□□ 1.28
SPAST-204ENST00000621856 SNX17Q15036 470 aa23.03■■□□□ 1.28
SPAST-204ENST00000621856 IFI16Q16666 785 aaKnown RBP23.03■■□□□ 1.28
SPAST-204ENST00000621856 SCARA3Q6AZY7 606 aa23.03■■□□□ 1.28
SPAST-204ENST00000621856 TAF2Q6P1X5 1199 aa23.03■■□□□ 1.28
SPAST-204ENST00000621856 NOTUMQ6P988 496 aa23.03■■□□□ 1.28
SPAST-204ENST00000621856 SLC27A1Q6PCB7 646 aa23.03■■□□□ 1.28
SPAST-204ENST00000621856 PALB2Q86YC2 1186 aa23.03■■□□□ 1.28
SPAST-204ENST00000621856 ZNF710Q8N1W2 664 aa23.03■■□□□ 1.28
SPAST-204ENST00000621856 ASB7Q9H672 318 aa23.03■■□□□ 1.28
SPAST-204ENST00000621856 MROH7Q68CQ1 1323 aa23.03■■□□□ 1.28
SPAST-204ENST00000621856 CITO14578 2027 aa23.03■■□□□ 1.28
SPAST-204ENST00000621856 MMEP08473 750 aa23.02■■□□□ 1.28
SPAST-204ENST00000621856 HOXA11P31270 313 aaPredicted RBP23.02■■□□□ 1.28
SPAST-204ENST00000621856 CRYBB1P53674 252 aaPredicted RBP23.02■■□□□ 1.28
SPAST-204ENST00000621856 BPIFB4P59827 614 aa23.02■■□□□ 1.28
SPAST-204ENST00000621856 AMPD2Q01433 879 aa23.02■■□□□ 1.28
SPAST-204ENST00000621856 CDR2Q01850 454 aa23.02■■□□□ 1.28
SPAST-204ENST00000621856 SLC10A6Q3KNW5 377 aa23.02■■□□□ 1.28
SPAST-204ENST00000621856 PAPD7Q5XG87 772 aaKnown RBP23.02■■□□□ 1.28
SPAST-204ENST00000621856 ZNF784Q8NCA9 323 aaPredicted RBP23.02■■□□□ 1.28
SPAST-204ENST00000621856 LRRN4CLQ8ND94 238 aa23.02■■□□□ 1.28
SPAST-204ENST00000621856 CTNNBL1Q8WYA6 563 aaPredicted RBP23.02■■□□□ 1.28
SPAST-204ENST00000621856 TAS2R14Q9NYV8 317 aa23.02■■□□□ 1.28
SPAST-204ENST00000621856 GTF2IRD1Q9UHL9 959 aa23.02■■□□□ 1.28
SPAST-204ENST00000621856 KRT19P08727 400 aa23.02■■□□□ 1.28
SPAST-204ENST00000621856 TMEM253P0C7T8 217 aa23.02■■□□□ 1.28
SPAST-204ENST00000621856 ZNF699Q32M78 642 aa23.02■■□□□ 1.28
SPAST-204ENST00000621856 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.02■■□□□ 1.28
SPAST-204ENST00000621856 SAR1BQ9Y6B6 198 aa23.02■■□□□ 1.28
SPAST-204ENST00000621856 V9GYY5 206 aaPredicted RBP23.02■■□□□ 1.28
SPAST-204ENST00000621856 A0A0A6YYK5 440 aaPredicted RBP23.01■■□□□ 1.27
SPAST-204ENST00000621856 FAM170AA1A519 330 aa23.01■■□□□ 1.27
SPAST-204ENST00000621856 MEFVO15553 781 aaPredicted RBP23.01■■□□□ 1.27
SPAST-204ENST00000621856 PALMO75781 387 aa23.01■■□□□ 1.27
SPAST-204ENST00000621856 ASGR1P07306 291 aa23.01■■□□□ 1.27
SPAST-204ENST00000621856 ACO1P21399 889 aaKnown RBP23.01■■□□□ 1.27
SPAST-204ENST00000621856 ABCB4P21439 1286 aa23.01■■□□□ 1.27
SPAST-204ENST00000621856 AXLP30530 894 aa23.01■■□□□ 1.27
SPAST-204ENST00000621856 FMO1Q01740 532 aa23.01■■□□□ 1.27
SPAST-204ENST00000621856 TMEM132DQ14C87 1099 aa23.01■■□□□ 1.27
SPAST-204ENST00000621856 KCNA10Q16322 511 aa23.01■■□□□ 1.27
SPAST-204ENST00000621856 WHAMMP3Q1A5X7 153 aa23.01■■□□□ 1.27
SPAST-204ENST00000621856 GDF6Q6KF10 455 aaPredicted RBP23.01■■□□□ 1.27
SPAST-204ENST00000621856 TMEM40Q8WWA1 233 aa23.01■■□□□ 1.27
SPAST-204ENST00000621856 PCDHB18PQ96TA0 734 aa23.01■■□□□ 1.27
SPAST-204ENST00000621856 NIF3L1Q9GZT8 377 aa23.01■■□□□ 1.27
SPAST-204ENST00000621856 M0QZ92 97 aa23■■□□□ 1.27
SPAST-204ENST00000621856 YY1P25490 414 aa23■■□□□ 1.27
SPAST-204ENST00000621856 RSPH3Q86UC2 560 aa23■■□□□ 1.27
SPAST-204ENST00000621856 CEP112Q8N8E3 955 aa23■■□□□ 1.27
SPAST-204ENST00000621856 KLHDC9Q8NEP7 349 aa23■■□□□ 1.27
SPAST-204ENST00000621856 TRIM6Q9C030 488 aaPredicted RBP23■■□□□ 1.27
SPAST-204ENST00000621856 PIN4Q9Y237 131 aaKnown RBP23■■□□□ 1.27
SPAST-204ENST00000621856 PCDHB2Q9Y5E7 798 aa23■■□□□ 1.27
SPAST-204ENST00000621856 NCANO14594 1321 aa22.99■■□□□ 1.27
SPAST-204ENST00000621856 RTN2O75298 545 aa22.99■■□□□ 1.27
SPAST-204ENST00000621856 FTLP02792 175 aaPredicted RBP22.99■■□□□ 1.27
SPAST-204ENST00000621856 TMEM270Q6UE05 265 aa22.99■■□□□ 1.27
SPAST-204ENST00000621856 CD302Q8IX05 232 aa22.99■■□□□ 1.27
SPAST-204ENST00000621856 C1orf127Q8N9H9 656 aa22.99■■□□□ 1.27
SPAST-204ENST00000621856 RBBP8NLQ8NC74 664 aaPredicted RBP22.99■■□□□ 1.27
SPAST-204ENST00000621856 EIF2AQ9BY44 585 aaKnown RBP22.99■■□□□ 1.27
SPAST-204ENST00000621856 CELF4Q9BZC1 486 aaKnown RBP22.99■■□□□ 1.27
SPAST-204ENST00000621856 PCDHGC5Q9Y5F6 944 aa22.99■■□□□ 1.27
SPAST-204ENST00000621856 ANKRD62A6NC57 917 aa22.99■■□□□ 1.27
SPAST-204ENST00000621856 GNRH1P01148 92 aa22.99■■□□□ 1.27
SPAST-204ENST00000621856 CALCAP01258 141 aa22.99■■□□□ 1.27
SPAST-204ENST00000621856 MRPS6P82932 125 aaKnown RBP22.99■■□□□ 1.27
SPAST-204ENST00000621856 NAA30Q147X3 362 aaPredicted RBP22.99■■□□□ 1.27
SPAST-204ENST00000621856 PCSK9Q8NBP7 692 aaKnown RBP22.99■■□□□ 1.27
SPAST-204ENST00000621856 DDX1Q92499 740 aaKnown RBP22.99■■□□□ 1.27
SPAST-204ENST00000621856 TAF4BQ92750 862 aa22.99■■□□□ 1.27
SPAST-204ENST00000621856 ISCUQ9H1K1 167 aa22.99■■□□□ 1.27
SPAST-204ENST00000621856 SNTG2Q9NY99 539 aa22.99■■□□□ 1.27
SPAST-204ENST00000621856 DDX20Q9UHI6 824 aaKnown RBP22.99■■□□□ 1.27
SPAST-204ENST00000621856 RALGAPA2Q2PPJ7 1873 aa22.98■■□□□ 1.27
SPAST-204ENST00000621856 THSD7BQ9C0I4 1608 aa22.98■■□□□ 1.27
SPAST-204ENST00000621856 GRID2IPA4D2P6 1211 aa22.98■■□□□ 1.27
SPAST-204ENST00000621856 ITGB3P05106 788 aa22.98■■□□□ 1.27
SPAST-204ENST00000621856 GZMAP12544 262 aa22.98■■□□□ 1.27
SPAST-204ENST00000621856 CST5P28325 142 aaPredicted RBP22.98■■□□□ 1.27
SPAST-204ENST00000621856 YARSP54577 528 aaKnown RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms