RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 UBL4BQ8N7F7 174 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 XXYLT1Q8NBI6 393 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 POMGNT1Q8WZA1 660 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 FIZ1Q96SL8 496 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 DDX23Q9BUQ8 820 aaKnown RBP11.38□□□□□ -0.59
CDH1-214ENST00000621016 RAB17Q9H0T7 212 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 TUFT1Q9NNX1 390 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 PAIP2BQ9ULR5 123 aaKnown RBP11.38□□□□□ -0.59
CDH1-214ENST00000621016 AHDC1Q5TGY3 1603 aaPredicted RBP11.38□□□□□ -0.59
CDH1-214ENST00000621016 H0YGN5 161 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 IGF2BP3O00425 579 aaKnown RBP eCLIP11.38□□□□□ -0.59
CDH1-214ENST00000621016 CHN1P15882 459 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 TNFRSF8P28908 595 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 GSTT1P30711 240 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 YWHABP31946 246 aaKnown RBP11.38□□□□□ -0.59
CDH1-214ENST00000621016 GPC5P78333 572 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 DMPKQ09013 629 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 SFSWAPQ12872 951 aaKnown RBP11.38□□□□□ -0.59
CDH1-214ENST00000621016 SETDB1Q15047 1291 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 SMUG1Q53HV7 270 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 TTC27Q6P3X3 843 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 ZDHHC14Q8IZN3 488 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 TAS1R2Q8TE23 839 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 SEMA4DQ92854 862 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 ZNF668Q96K58 619 aaPredicted RBP11.38□□□□□ -0.59
CDH1-214ENST00000621016 MTFR1LQ9H019 292 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 ETNK2Q9NVF9 386 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.38□□□□□ -0.59
CDH1-214ENST00000621016 ZNF70Q9UC06 446 aaPredicted RBP11.38□□□□□ -0.59
CDH1-214ENST00000621016 SERPINA10Q9UK55 444 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 NFS1Q9Y697 457 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 MYH4Q9Y623 1939 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 TRIM43BA6NCK2 446 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 ADRB2P07550 413 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 BIRC3Q13489 604 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 GDAP1Q8TB36 358 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 SLC5A5Q92911 643 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 ELAC2Q9BQ52 826 aaKnown RBP11.38□□□□□ -0.59
CDH1-214ENST00000621016 TMEM117Q9H0C3 514 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 INTUQ9ULD6 942 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 STXBP5LQ9Y2K9 1186 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 TMEM98Q9Y2Y6 226 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 DENND3A2RUS2 1198 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 HNRNPDLO14979 420 aaKnown RBP11.37□□□□□ -0.59
CDH1-214ENST00000621016 ZCCHC18P0CG32 403 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 SP100P23497 879 aaPredicted RBP11.37□□□□□ -0.59
CDH1-214ENST00000621016 RAD23BP54727 409 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 CCDC92Q53HC0 331 aaPredicted RBP11.37□□□□□ -0.59
CDH1-214ENST00000621016 KAZNQ674X7 775 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 LCA5Q86VQ0 697 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 PRELID2Q8N945 189 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 ZNF564Q8TBZ8 553 aaPredicted RBP11.37□□□□□ -0.59
CDH1-214ENST00000621016 NEK9Q8TD19 979 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 KIFAP3Q92845 792 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 RNF25Q96BH1 459 aaPredicted RBP11.37□□□□□ -0.59
CDH1-214ENST00000621016 NR1H4Q96RI1 486 aaPredicted RBP11.37□□□□□ -0.59
CDH1-214ENST00000621016 PRMT1Q99873 361 aaKnown RBP11.37□□□□□ -0.59
CDH1-214ENST00000621016 MXRA8Q9BRK3 442 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 FAM213AQ9BRX8 229 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 SLITRK6Q9H5Y7 841 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 ZWILCHQ9H900 591 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 FAM114A2Q9NRY5 505 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 ARHGEF38Q9NXL2 777 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 TMX2Q9Y320 296 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 GSTTP1A0A1W2PQM5 241 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 KLRG2A4D1S0 409 aaPredicted RBP11.37□□□□□ -0.59
CDH1-214ENST00000621016 PEX10O60683 326 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 E2F6O75461 281 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 CREB1P16220 341 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 SPP2Q13103 211 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 MAPK7Q13164 816 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 SNRNP35Q16560 246 aaKnown RBP11.37□□□□□ -0.59
CDH1-214ENST00000621016 BMT2Q1RMZ1 405 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 SPOPLQ6IQ16 392 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 TTC30AQ86WT1 665 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 ZC3H3Q8IXZ2 948 aaKnown RBP11.37□□□□□ -0.59
CDH1-214ENST00000621016 ATP11CQ8NB49 1132 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 DNAJC1Q96KC8 554 aaKnown RBP11.37□□□□□ -0.59
CDH1-214ENST00000621016 ACCSQ96QU6 501 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.37□□□□□ -0.59
CDH1-214ENST00000621016 RABL2AQ9UBK7 228 aaPredicted RBP11.37□□□□□ -0.59
CDH1-214ENST00000621016 CTNNAL1Q9UBT7 734 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 NKX1-2Q9UD57 310 aaPredicted RBP11.37□□□□□ -0.59
CDH1-214ENST00000621016 ANAPC7Q9UJX3 599 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 BOLA2-SMG1P6H3BVE0 249 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 EIF3DO15371 548 aaKnown RBP eCLIP11.37□□□□□ -0.59
CDH1-214ENST00000621016 PIAS1O75925 651 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 LUC7L3O95232 432 aaKnown RBP11.37□□□□□ -0.59
CDH1-214ENST00000621016 TNNI1P19237 187 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 QARSP47897 775 aaKnown RBP11.37□□□□□ -0.59
CDH1-214ENST00000621016 RARRES1P49788 294 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 PTENP60484 403 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 RPS6P62753 249 aaKnown RBP11.37□□□□□ -0.59
CDH1-214ENST00000621016 PPP2R5CQ13362 524 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 MTMR3Q13615 1198 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 ZNF394Q53GI3 561 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 SLFN11Q7Z7L1 901 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 ATP8B4Q8TF62 1192 aa11.37□□□□□ -0.59
CDH1-214ENST00000621016 ACSF2Q96CM8 615 aaPredicted RBP11.37□□□□□ -0.59
CDH1-214ENST00000621016 KREMEN1Q96MU8 473 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms