RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 PPM1LQ5SGD2 360 aa18.72■□□□□ 0.59
HMGN3-203ENST00000620514 IER5LQ5T953 404 aa18.72■□□□□ 0.59
HMGN3-203ENST00000620514 LIN9Q5TKA1 542 aa18.72■□□□□ 0.59
HMGN3-203ENST00000620514 RRAGBQ5VZM2 374 aa18.72■□□□□ 0.59
HMGN3-203ENST00000620514 SUGP1Q8IWZ8 645 aaKnown RBP18.72■□□□□ 0.59
HMGN3-203ENST00000620514 STAMQ92783 540 aa18.72■□□□□ 0.59
HMGN3-203ENST00000620514 KCNK12Q9HB15 430 aa18.72■□□□□ 0.59
HMGN3-203ENST00000620514 STK17AQ9UEE5 414 aa18.72■□□□□ 0.59
HMGN3-203ENST00000620514 CCDC39Q9UFE4 941 aa18.72■□□□□ 0.59
HMGN3-203ENST00000620514 BACE2Q9Y5Z0 518 aa18.72■□□□□ 0.59
HMGN3-203ENST00000620514 TTC26A0AVF1 554 aa18.71■□□□□ 0.59
HMGN3-203ENST00000620514 TISP43B9A030 160 aa18.71■□□□□ 0.59
HMGN3-203ENST00000620514 CCL16O15467 120 aa18.71■□□□□ 0.59
HMGN3-203ENST00000620514 FAM189A1O60320 539 aa18.71■□□□□ 0.59
HMGN3-203ENST00000620514 RPL9P32969 192 aaKnown RBP18.71■□□□□ 0.59
HMGN3-203ENST00000620514 NTHL1P78549 312 aa18.71■□□□□ 0.59
HMGN3-203ENST00000620514 VARS2Q5ST30 1063 aaKnown RBP18.71■□□□□ 0.59
HMGN3-203ENST00000620514 AXDND1Q5T1B0 1012 aaPredicted RBP18.71■□□□□ 0.59
HMGN3-203ENST00000620514 ANKS3Q6ZW76 656 aa18.71■□□□□ 0.59
HMGN3-203ENST00000620514 GET4Q7L5D6 327 aaPredicted RBP18.71■□□□□ 0.59
HMGN3-203ENST00000620514 GRASPQ7Z6J2 395 aaPredicted RBP18.71■□□□□ 0.59
HMGN3-203ENST00000620514 SFR1Q86XK3 245 aa18.71■□□□□ 0.59
HMGN3-203ENST00000620514 KRI1Q8N9T8 703 aaKnown RBP18.71■□□□□ 0.59
HMGN3-203ENST00000620514 SLC7A14Q8TBB6 771 aa18.71■□□□□ 0.59
HMGN3-203ENST00000620514 RSAD2Q8WXG1 361 aa18.71■□□□□ 0.59
HMGN3-203ENST00000620514 SNX21Q969T3 373 aa18.71■□□□□ 0.59
HMGN3-203ENST00000620514 KIF12Q96FN5 646 aa18.71■□□□□ 0.59
HMGN3-203ENST00000620514 PANK2Q9BZ23 570 aa18.71■□□□□ 0.59
HMGN3-203ENST00000620514 IKZF4Q9H2S9 585 aa18.71■□□□□ 0.59
HMGN3-203ENST00000620514 ZSCAN16Q9H4T2 348 aaPredicted RBP18.71■□□□□ 0.59
HMGN3-203ENST00000620514 PLEKHA5Q9HAU0 1116 aa18.71■□□□□ 0.59
HMGN3-203ENST00000620514 NUB1Q9Y5A7 615 aa18.71■□□□□ 0.59
HMGN3-203ENST00000620514 DOCK6Q96HP0 2047 aa18.71■□□□□ 0.59
HMGN3-203ENST00000620514 ZDBF2Q9HCK1 2354 aa18.7■□□□□ 0.58
HMGN3-203ENST00000620514 A0A087X0B3 334 aa18.7■□□□□ 0.58
HMGN3-203ENST00000620514 A0A0B4J269 797 aa18.7■□□□□ 0.58
HMGN3-203ENST00000620514 MYMKA6NI61 221 aa18.7■□□□□ 0.58
HMGN3-203ENST00000620514 LACTBL1A8MY62 500 aa18.7■□□□□ 0.58
HMGN3-203ENST00000620514 ANKRD63C9JTQ0 380 aa18.7■□□□□ 0.58
HMGN3-203ENST00000620514 OGTO15294 1046 aa18.7■□□□□ 0.58
HMGN3-203ENST00000620514 HNRNPA1P09651 372 aaKnown RBP eCLIP18.7■□□□□ 0.58
HMGN3-203ENST00000620514 MCM4P33991 863 aa18.7■□□□□ 0.58
HMGN3-203ENST00000620514 GUCY2FP51841 1108 aa18.7■□□□□ 0.58
HMGN3-203ENST00000620514 GTF2BQ00403 316 aa18.7■□□□□ 0.58
HMGN3-203ENST00000620514 TDGQ13569 410 aa18.7■□□□□ 0.58
HMGN3-203ENST00000620514 ENOX2Q16206 610 aaKnown RBP18.7■□□□□ 0.58
HMGN3-203ENST00000620514 MAP4K3Q8IVH8 894 aa18.7■□□□□ 0.58
HMGN3-203ENST00000620514 ST13P5Q8NFI4 369 aaPredicted RBP18.7■□□□□ 0.58
HMGN3-203ENST00000620514 DDX12PQ92771 950 aa18.7■□□□□ 0.58
HMGN3-203ENST00000620514 MSTO1Q9BUK6 570 aa18.7■□□□□ 0.58
HMGN3-203ENST00000620514 EPS15L1Q9UBC2 864 aa18.7■□□□□ 0.58
HMGN3-203ENST00000620514 MORC2Q9Y6X9 1032 aaPredicted RBP18.7■□□□□ 0.58
HMGN3-203ENST00000620514 KMT2EQ8IZD2 1858 aa18.69■□□□□ 0.58
HMGN3-203ENST00000620514 DOCK8Q8NF50 2099 aa18.69■□□□□ 0.58
HMGN3-203ENST00000620514 TBC1D4O60343 1298 aa18.69■□□□□ 0.58
HMGN3-203ENST00000620514 SCP2P22307 547 aa18.69■□□□□ 0.58
HMGN3-203ENST00000620514 TXLNAP40222 546 aa18.69■□□□□ 0.58
HMGN3-203ENST00000620514 NASPP49321 788 aaPredicted RBP18.69■□□□□ 0.58
HMGN3-203ENST00000620514 ROR1Q01973 937 aa18.69■□□□□ 0.58
HMGN3-203ENST00000620514 PPP2R3AQ06190 1150 aa18.69■□□□□ 0.58
HMGN3-203ENST00000620514 ZBTB6Q15916 424 aa18.69■□□□□ 0.58
HMGN3-203ENST00000620514 FOXD4L5Q5VV16 416 aaPredicted RBP18.69■□□□□ 0.58
HMGN3-203ENST00000620514 PRSS33Q8NF86 280 aa18.69■□□□□ 0.58
HMGN3-203ENST00000620514 FOXD4L4Q8WXT5 416 aaPredicted RBP18.69■□□□□ 0.58
HMGN3-203ENST00000620514 DNAJC19Q96DA6 116 aa18.69■□□□□ 0.58
HMGN3-203ENST00000620514 SUSD3Q96L08 255 aa18.69■□□□□ 0.58
HMGN3-203ENST00000620514 KCNH6Q9H252 994 aa18.69■□□□□ 0.58
HMGN3-203ENST00000620514 RPF1Q9H9Y2 349 aaKnown RBP18.69■□□□□ 0.58
HMGN3-203ENST00000620514 POLIQ9UNA4 740 aa18.69■□□□□ 0.58
HMGN3-203ENST00000620514 SYN3O14994 580 aa18.68■□□□□ 0.58
HMGN3-203ENST00000620514 NARSO43776 548 aaKnown RBP18.68■□□□□ 0.58
HMGN3-203ENST00000620514 FSHRP23945 695 aa18.68■□□□□ 0.58
HMGN3-203ENST00000620514 AVPR2P30518 371 aa18.68■□□□□ 0.58
HMGN3-203ENST00000620514 LRPAP1P30533 357 aa18.68■□□□□ 0.58
HMGN3-203ENST00000620514 HOXA9P31269 272 aa18.68■□□□□ 0.58
HMGN3-203ENST00000620514 ARPP19P56211 112 aa18.68■□□□□ 0.58
HMGN3-203ENST00000620514 MRPL58Q14197 206 aaKnown RBP18.68■□□□□ 0.58
HMGN3-203ENST00000620514 STK38Q15208 465 aa18.68■□□□□ 0.58
HMGN3-203ENST00000620514 SLC8B1Q6J4K2 584 aa18.68■□□□□ 0.58
HMGN3-203ENST00000620514 SV2BQ7L1I2 683 aa18.68■□□□□ 0.58
HMGN3-203ENST00000620514 ZNF720Q7Z2F6 126 aa18.68■□□□□ 0.58
HMGN3-203ENST00000620514 LINC00301Q8NCQ3 95 aa18.68■□□□□ 0.58
HMGN3-203ENST00000620514 FAM212AQ96EL1 285 aa18.68■□□□□ 0.58
HMGN3-203ENST00000620514 ST6GALNAC4Q9H4F1 302 aa18.68■□□□□ 0.58
HMGN3-203ENST00000620514 HCFC1R1Q9NWW0 138 aa18.68■□□□□ 0.58
HMGN3-203ENST00000620514 TBC1D7Q9P0N9 293 aa18.68■□□□□ 0.58
HMGN3-203ENST00000620514 IGSF9Q9P2J2 1179 aa18.68■□□□□ 0.58
HMGN3-203ENST00000620514 TFIP11Q9UBB9 837 aaKnown RBP18.68■□□□□ 0.58
HMGN3-203ENST00000620514 FBXL5Q9UKA1 691 aa18.68■□□□□ 0.58
HMGN3-203ENST00000620514 CPSF3Q9UKF6 684 aaKnown RBP18.68■□□□□ 0.58
HMGN3-203ENST00000620514 UBQLN1Q9UMX0 589 aaKnown RBP18.68■□□□□ 0.58
HMGN3-203ENST00000620514 WDR27A2RRH5 827 aa18.67■□□□□ 0.58
HMGN3-203ENST00000620514 ADRB2P07550 413 aa18.67■□□□□ 0.58
HMGN3-203ENST00000620514 LAMP2P13473 410 aa18.67■□□□□ 0.58
HMGN3-203ENST00000620514 STAT6P42226 847 aa18.67■□□□□ 0.58
HMGN3-203ENST00000620514 NHLH1Q02575 133 aa18.67■□□□□ 0.58
HMGN3-203ENST00000620514 KYAT1Q16773 422 aa18.67■□□□□ 0.58
HMGN3-203ENST00000620514 UVSSAQ2YD98 709 aa18.67■□□□□ 0.58
HMGN3-203ENST00000620514 CTXN3Q4LDR2 81 aa18.67■□□□□ 0.58
HMGN3-203ENST00000620514 CCDC73Q6ZRK6 1079 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms