RNA–Protein interactions for RNA: ENST00000619890.1

SSX4B-202, Transcript of SSX family member 4B, humanhuman

TSL 5 BASIC

Gene SSX4B, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-202ENST00000619890 BSNDQ8WZ55 320 aa6.64□□□□□ -1.35
SSX4B-202ENST00000619890 LARP4BQ92615 738 aaKnown RBP6.64□□□□□ -1.35
SSX4B-202ENST00000619890 BORCS6Q96GS4 357 aa6.64□□□□□ -1.35
SSX4B-202ENST00000619890 CPB2Q96IY4 423 aa6.64□□□□□ -1.35
SSX4B-202ENST00000619890 FAM193BQ96PV7 902 aaPredicted RBP6.64□□□□□ -1.35
SSX4B-202ENST00000619890 RPS6KC1Q96S38 1066 aa6.64□□□□□ -1.35
SSX4B-202ENST00000619890 TMEM175Q9BSA9 504 aa6.64□□□□□ -1.35
SSX4B-202ENST00000619890 RUSC1Q9BVN2 902 aa6.64□□□□□ -1.35
SSX4B-202ENST00000619890 MRPL4Q9BYD3 311 aaKnown RBP6.64□□□□□ -1.35
SSX4B-202ENST00000619890 POMKQ9H5K3 350 aa6.64□□□□□ -1.35
SSX4B-202ENST00000619890 PDZD7Q9H5P4 517 aa6.64□□□□□ -1.35
SSX4B-202ENST00000619890 TMEM134Q9H6X4 195 aa6.64□□□□□ -1.35
SSX4B-202ENST00000619890 NGRNQ9NPE2 291 aaKnown RBP6.64□□□□□ -1.35
SSX4B-202ENST00000619890 KMT5AQ9NQR1 393 aa6.64□□□□□ -1.35
SSX4B-202ENST00000619890 TBC1D13Q9NVG8 400 aa6.64□□□□□ -1.35
SSX4B-202ENST00000619890 SPG21Q9NZD8 308 aa6.64□□□□□ -1.35
SSX4B-202ENST00000619890 FBXO2Q9UK22 296 aaPredicted RBP6.64□□□□□ -1.35
SSX4B-202ENST00000619890 ZMIZ1Q9ULJ6 1067 aa6.64□□□□□ -1.35
SSX4B-202ENST00000619890 INPP5FQ9Y2H2 1132 aa6.64□□□□□ -1.35
SSX4B-202ENST00000619890 GIT1Q9Y2X7 761 aa6.64□□□□□ -1.35
SSX4B-202ENST00000619890 CLIC4Q9Y696 253 aa6.64□□□□□ -1.35
SSX4B-202ENST00000619890 PDCD11Q14690 1871 aaKnown RBP6.64□□□□□ -1.35
SSX4B-202ENST00000619890 DMXL2Q8TDJ6 3036 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 A0A087WWV3 80 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 ARL5CA6NH57 179 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 CCDC169A6NNP5 214 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 CYSRT1A8MQ03 144 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 K7ERI5 159 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 SLC30A4O14863 429 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 FSCN2O14926 492 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 B4GALT5O43286 388 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 OFD1O75665 1012 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 NPTXRO95502 500 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 KRT18P05783 430 aaKnown RBP6.63□□□□□ -1.35
SSX4B-202ENST00000619890 ZSCAN22P10073 491 aaPredicted RBP6.63□□□□□ -1.35
SSX4B-202ENST00000619890 PLS3P13797 630 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 MLH1P40692 756 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 ZNF131P52739 623 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 NCKAP1LP55160 1127 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 PEX3P56589 373 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 BCAR1P56945 870 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 STRN3Q13033 797 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 MAPK7Q13164 816 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 BECN1Q14457 450 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 SMC1AQ14683 1233 aaKnown RBP6.63□□□□□ -1.35
SSX4B-202ENST00000619890 KARSQ15046 597 aaKnown RBP6.63□□□□□ -1.35
SSX4B-202ENST00000619890 STK38Q15208 465 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 ATF7IP2Q5U623 682 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 LRRC55Q6ZSA7 311 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 METTL3Q86U44 580 aaKnown RBP6.63□□□□□ -1.35
SSX4B-202ENST00000619890 MAML2Q8IZL2 1156 aaPredicted RBP6.63□□□□□ -1.35
SSX4B-202ENST00000619890 DAW1Q8N136 415 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 RAD54LQ92698 747 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 LPPQ93052 612 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 CALR3Q96L12 384 aaKnown RBP6.63□□□□□ -1.35
SSX4B-202ENST00000619890 USP28Q96RU2 1077 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 TCF25Q9BQ70 676 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 REEP2Q9BRK0 252 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 PYM1Q9BRP8 204 aaKnown RBP6.63□□□□□ -1.35
SSX4B-202ENST00000619890 KIFC3Q9BVG8 833 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 EIF2AQ9BY44 585 aaKnown RBP6.63□□□□□ -1.35
SSX4B-202ENST00000619890 NXF3Q9H4D5 531 aaKnown RBP6.63□□□□□ -1.35
SSX4B-202ENST00000619890 PARVGQ9HBI0 331 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 ENTPD7Q9NQZ7 604 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 TOPORSQ9NS56 1045 aaPredicted RBP6.63□□□□□ -1.35
SSX4B-202ENST00000619890 DLGAP2Q9P1A6 1054 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 TNFSF13BQ9Y275 285 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 ATP6V1DQ9Y5K8 247 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.63□□□□□ -1.35
SSX4B-202ENST00000619890 ADGRG1Q9Y653 693 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 WDFY3Q8IZQ1 3526 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 IGSF10Q6WRI0 2623 aa6.63□□□□□ -1.35
SSX4B-202ENST00000619890 CITO14578 2027 aa6.62□□□□□ -1.35
SSX4B-202ENST00000619890 LOC400499M0QZD8 3231 aa6.62□□□□□ -1.35
SSX4B-202ENST00000619890 KRBA1A5PL33 1030 aa6.62□□□□□ -1.35
SSX4B-202ENST00000619890 MEIS3P2A8K0S8 358 aa6.62□□□□□ -1.35
SSX4B-202ENST00000619890 C1QTNF9BB2RNN3 333 aa6.62□□□□□ -1.35
SSX4B-202ENST00000619890 K7ENM7 598 aa6.62□□□□□ -1.35
SSX4B-202ENST00000619890 SPTLC2O15270 562 aa6.62□□□□□ -1.35
SSX4B-202ENST00000619890 FAM13AO94988 1023 aa6.62□□□□□ -1.35
SSX4B-202ENST00000619890 C1QTNF9P0C862 333 aa6.62□□□□□ -1.35
SSX4B-202ENST00000619890 MCF2P10911 925 aa6.62□□□□□ -1.35
SSX4B-202ENST00000619890 MARCKSP29966 332 aaPredicted RBP6.62□□□□□ -1.35
SSX4B-202ENST00000619890 STAT6P42226 847 aa6.62□□□□□ -1.35
SSX4B-202ENST00000619890 ERVFC1P60507 584 aa6.62□□□□□ -1.35
SSX4B-202ENST00000619890 CEBPZQ03701 1054 aaKnown RBP6.62□□□□□ -1.35
SSX4B-202ENST00000619890 RING1Q06587 406 aa6.62□□□□□ -1.35
SSX4B-202ENST00000619890 DSC1Q08554 894 aa6.62□□□□□ -1.35
SSX4B-202ENST00000619890 TDGQ13569 410 aa6.62□□□□□ -1.35
SSX4B-202ENST00000619890 NOLC1Q14978 699 aaKnown RBP eCLIP6.62□□□□□ -1.35
SSX4B-202ENST00000619890 KYAT1Q16773 422 aa6.62□□□□□ -1.35
SSX4B-202ENST00000619890 ZNF568Q3ZCX4 644 aa6.62□□□□□ -1.35
SSX4B-202ENST00000619890 KMT5BQ4FZB7 885 aa6.62□□□□□ -1.35
SSX4B-202ENST00000619890 N4BP2L1Q5TBK1 243 aaPredicted RBP6.62□□□□□ -1.35
SSX4B-202ENST00000619890 TMCO4Q5TGY1 634 aa6.62□□□□□ -1.35
SSX4B-202ENST00000619890 FOXD4L5Q5VV16 416 aaPredicted RBP6.62□□□□□ -1.35
SSX4B-202ENST00000619890 MPZL3Q6UWV2 235 aa6.62□□□□□ -1.35
SSX4B-202ENST00000619890 ZPBP2Q6X784 338 aa6.62□□□□□ -1.35
SSX4B-202ENST00000619890 GPBP1Q86WP2 473 aa6.62□□□□□ -1.35
SSX4B-202ENST00000619890 KDF1Q8NAX2 398 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms