RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	TKFC	Q3LXA3	575 aa		15.4	■□□□□ 0.06
SMTN-223	ENST00000619644	TAB3	Q8N5C8	712 aa	Predicted RBP	15.4	■□□□□ 0.06
SMTN-223	ENST00000619644	OSBPL1A	Q9BXW6	950 aa		15.4	■□□□□ 0.06
SMTN-223	ENST00000619644	RANBP17	Q9H2T7	1088 aa	Known RBP	15.4	■□□□□ 0.06
SMTN-223	ENST00000619644	ATP8B3	O60423	1300 aa		15.4	■□□□□ 0.06
SMTN-223	ENST00000619644		O00370	1275 aa		15.39	■□□□□ 0.06
SMTN-223	ENST00000619644	ATP9A	O75110	1047 aa		15.39	■□□□□ 0.06
SMTN-223	ENST00000619644	UPP2	O95045	317 aa		15.39	■□□□□ 0.06
SMTN-223	ENST00000619644	GJB6	O95452	261 aa		15.39	■□□□□ 0.06
SMTN-223	ENST00000619644	GGPS1	O95749	300 aa		15.39	■□□□□ 0.06
SMTN-223	ENST00000619644	GZMA	P12544	262 aa		15.39	■□□□□ 0.06
SMTN-223	ENST00000619644	CD58	P19256	250 aa		15.39	■□□□□ 0.06
SMTN-223	ENST00000619644	THEMIS2	Q5TEJ8	643 aa		15.39	■□□□□ 0.06
SMTN-223	ENST00000619644	FITM2	Q8N6M3	262 aa		15.39	■□□□□ 0.06
SMTN-223	ENST00000619644	TAAR1	Q96RJ0	339 aa		15.39	■□□□□ 0.06
SMTN-223	ENST00000619644	C11orf70	Q9BRQ4	267 aa		15.39	■□□□□ 0.06
SMTN-223	ENST00000619644	HERC5	Q9UII4	1024 aa	Known RBP	15.39	■□□□□ 0.06
SMTN-223	ENST00000619644	CNOT7	Q9UIV1	285 aa	Known RBP	15.39	■□□□□ 0.06
SMTN-223	ENST00000619644	R3HDM2	Q9Y2K5	976 aa	Known RBP	15.39	■□□□□ 0.06
SMTN-223	ENST00000619644	ADSS	P30520	456 aa		15.39	■□□□□ 0.05
SMTN-223	ENST00000619644	SPP2	Q13103	211 aa		15.39	■□□□□ 0.05
SMTN-223	ENST00000619644	TMED2	Q15363	201 aa		15.39	■□□□□ 0.05
SMTN-223	ENST00000619644	SV2A	Q7L0J3	742 aa		15.39	■□□□□ 0.05
SMTN-223	ENST00000619644	CEP170P1	Q96L14	293 aa		15.39	■□□□□ 0.05
SMTN-223	ENST00000619644	ZFAT	Q9P243	1243 aa		15.39	■□□□□ 0.05
SMTN-223	ENST00000619644		A6NHS1	94 aa		15.39	■□□□□ 0.05
SMTN-223	ENST00000619644	PI4K2B	G5E9Z4	385 aa		15.39	■□□□□ 0.05
SMTN-223	ENST00000619644	RALA	P11233	206 aa		15.39	■□□□□ 0.05
SMTN-223	ENST00000619644	SPOPL	Q6IQ16	392 aa		15.39	■□□□□ 0.05
SMTN-223	ENST00000619644	ASRGL1	Q7L266	308 aa		15.39	■□□□□ 0.05
SMTN-223	ENST00000619644	CROCCP2	Q86T23	111 aa		15.39	■□□□□ 0.05
SMTN-223	ENST00000619644	KCTD17	Q8N5Z5	321 aa		15.39	■□□□□ 0.05
SMTN-223	ENST00000619644	SHC3	Q92529	594 aa		15.39	■□□□□ 0.05
SMTN-223	ENST00000619644	HAUS1	Q96CS2	278 aa		15.39	■□□□□ 0.05
SMTN-223	ENST00000619644	TBX20	Q9UMR3	447 aa		15.39	■□□□□ 0.05
SMTN-223	ENST00000619644	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	15.39	■□□□□ 0.05
SMTN-223	ENST00000619644	POC1B-GALNT4	F8VUJ3	575 aa		15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	SPAG7	O75391	227 aa		15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	AP1G2	O75843	785 aa		15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	ATF7	P17544	494 aa	Predicted RBP	15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	NSF	P46459	744 aa	Known RBP	15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	NPTX2	P47972	431 aa		15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	TNFAIP8L3	Q5GJ75	292 aa		15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	TRIM68	Q6AZZ1	485 aa		15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	ACAD10	Q6JQN1	1059 aa		15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	SNF8	Q96H20	258 aa		15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	NAF1	Q96HR8	494 aa	Known RBP	15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	TGS1	Q96RS0	853 aa	Known RBP	15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	HERPUD2	Q9BSE4	406 aa		15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	C1orf112	Q9NSG2	853 aa		15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	NKIRAS1	Q9NYS0	192 aa		15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	EXOC7	Q9UPT5	735 aa		15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	MTM1	Q13496	603 aa		15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	CYFIP1	Q7L576	1253 aa		15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	SPATA21	Q7Z572	469 aa		15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	FNBP1	Q96RU3	617 aa		15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	TMEM109	Q9BVC6	243 aa		15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	QTRT2	Q9H974	415 aa	Known RBP	15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	RXFP1	Q9HBX9	757 aa		15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	UVRAG	Q9P2Y5	699 aa		15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	ARL2BP	Q9Y2Y0	163 aa		15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	P4HA2	O15460	535 aa		15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	CCNG1	P51959	295 aa		15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	CD101	Q93033	1021 aa		15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	RMDN2	Q96LZ7	410 aa		15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	MOV10L1	Q9BXT6	1211 aa	Known RBP	15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	AGO4	Q9HCK5	861 aa	Known RBP	15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	ZNF70	Q9UC06	446 aa	Predicted RBP	15.38	■□□□□ 0.05
SMTN-223	ENST00000619644	KIF13B	Q9NQT8	1826 aa		15.37	■□□□□ 0.05
SMTN-223	ENST00000619644	SNUPN	O95149	360 aa	Known RBP	15.37	■□□□□ 0.05
SMTN-223	ENST00000619644	CYP1A2	P05177	515 aa		15.37	■□□□□ 0.05
SMTN-223	ENST00000619644	MRPS9	P82933	396 aa	Known RBP	15.37	■□□□□ 0.05
SMTN-223	ENST00000619644	PLCB3	Q01970	1234 aa		15.37	■□□□□ 0.05
SMTN-223	ENST00000619644	SIX1	Q15475	284 aa	Predicted RBP	15.37	■□□□□ 0.05
SMTN-223	ENST00000619644	TRMT10C	Q7L0Y3	403 aa	Known RBP	15.37	■□□□□ 0.05
SMTN-223	ENST00000619644	CYP4X1	Q8N118	509 aa		15.37	■□□□□ 0.05
SMTN-223	ENST00000619644	HELQ	Q8TDG4	1101 aa		15.37	■□□□□ 0.05
SMTN-223	ENST00000619644	RMDN3	Q96TC7	470 aa		15.37	■□□□□ 0.05
SMTN-223	ENST00000619644	STRA6	Q9BX79	667 aa		15.37	■□□□□ 0.05
SMTN-223	ENST00000619644	ETAA1	Q9NY74	926 aa		15.37	■□□□□ 0.05
SMTN-223	ENST00000619644	YDJC	A8MPS7	323 aa		15.37	■□□□□ 0.05
SMTN-223	ENST00000619644	ACOT2	P49753	483 aa		15.37	■□□□□ 0.05
SMTN-223	ENST00000619644	HADHB	P55084	474 aa	Known RBP	15.37	■□□□□ 0.05
SMTN-223	ENST00000619644	GTF2B	Q00403	316 aa		15.37	■□□□□ 0.05
SMTN-223	ENST00000619644	ALCAM	Q13740	583 aa		15.37	■□□□□ 0.05
SMTN-223	ENST00000619644	RBBP5	Q15291	538 aa	Known RBP	15.37	■□□□□ 0.05
SMTN-223	ENST00000619644	FAM160B2	Q86V87	743 aa		15.37	■□□□□ 0.05
SMTN-223	ENST00000619644	IWS1	Q96ST2	819 aa		15.37	■□□□□ 0.05
SMTN-223	ENST00000619644	TMEM8A	Q9HCN3	771 aa		15.37	■□□□□ 0.05
SMTN-223	ENST00000619644	AAAS	Q9NRG9	546 aa		15.37	■□□□□ 0.05
SMTN-223	ENST00000619644	FEM1B	Q9UK73	627 aa		15.37	■□□□□ 0.05
SMTN-223	ENST00000619644	ATP4A	P20648	1035 aa		15.36	■□□□□ 0.05
SMTN-223	ENST00000619644	RPS6	P62753	249 aa	Known RBP	15.36	■□□□□ 0.05
SMTN-223	ENST00000619644	WDR44	Q5JSH3	913 aa		15.36	■□□□□ 0.05
SMTN-223	ENST00000619644	ARHGEF16	Q5VV41	709 aa		15.36	■□□□□ 0.05
SMTN-223	ENST00000619644	MORC4	Q8TE76	937 aa		15.36	■□□□□ 0.05
SMTN-223	ENST00000619644	VTI1A	Q96AJ9	217 aa		15.36	■□□□□ 0.05
SMTN-223	ENST00000619644	ACSF2	Q96CM8	615 aa	Predicted RBP	15.36	■□□□□ 0.05
SMTN-223	ENST00000619644	C10orf71	Q711Q0	1435 aa		15.36	■□□□□ 0.05

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms