RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 LILRA6Q6PI73 481 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.98□□□□□ -0.97
NEK3-209ENST00000618856 STXBP4Q6ZWJ1 553 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 NT5DC4Q86YG4 428 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 BRSK2Q8IWQ3 736 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 SMRP1Q8NCR6 262 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 ZSWIM2Q8NEG5 633 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 CXorf38Q8TB03 319 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 LNX1Q8TBB1 728 aaPredicted RBP8.98□□□□□ -0.97
NEK3-209ENST00000618856 MICAL1Q8TDZ2 1067 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 PIK3R5Q8WYR1 880 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 RABGGTAQ92696 567 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 C18orf25Q96B23 403 aaPredicted RBP8.98□□□□□ -0.97
NEK3-209ENST00000618856 CBWD1Q9BRT8 395 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 RHOBTB2Q9BYZ6 727 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 S1PR5Q9H228 398 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 KCTD10Q9H3F6 313 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 GOLGA2P5Q9HBQ8 144 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 MRPL17Q9NRX2 175 aaKnown RBP8.98□□□□□ -0.97
NEK3-209ENST00000618856 CGNQ9P2M7 1197 aaKnown RBP8.98□□□□□ -0.97
NEK3-209ENST00000618856 TUBGCP4Q9UGJ1 667 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 UBQLN1Q9UMX0 589 aaKnown RBP8.98□□□□□ -0.97
NEK3-209ENST00000618856 SSX2IPQ9Y2D8 614 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 C2CD2Q9Y426 696 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 HCFC2Q9Y5Z7 792 aa8.98□□□□□ -0.97
NEK3-209ENST00000618856 SF3B1O75533 1304 aaKnown RBP eCLIP8.98□□□□□ -0.97
NEK3-209ENST00000618856 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.97□□□□□ -0.97
NEK3-209ENST00000618856 ANO9A1A5B4 782 aa8.97□□□□□ -0.97
NEK3-209ENST00000618856 M0QZQ0 153 aa8.97□□□□□ -0.97
NEK3-209ENST00000618856 PODXLO00592 558 aa8.97□□□□□ -0.97
NEK3-209ENST00000618856 PIRO00625 290 aa8.97□□□□□ -0.97
NEK3-209ENST00000618856 TEX28O15482 410 aa8.97□□□□□ -0.97
NEK3-209ENST00000618856 EXTL3O43909 919 aa8.97□□□□□ -0.97
NEK3-209ENST00000618856 B3GAT3O94766 335 aa8.97□□□□□ -0.97
NEK3-209ENST00000618856 LDHAP00338 332 aaKnown RBP8.97□□□□□ -0.97
NEK3-209ENST00000618856 RPN1P04843 607 aaKnown RBP8.97□□□□□ -0.97
NEK3-209ENST00000618856 PRR29P0C7W0 189 aa8.97□□□□□ -0.97
NEK3-209ENST00000618856 KCNA5P22460 613 aa8.97□□□□□ -0.97
NEK3-209ENST00000618856 PAX3P23760 479 aa8.97□□□□□ -0.97
NEK3-209ENST00000618856 ANP32AP39687 249 aaKnown RBP8.97□□□□□ -0.97
NEK3-209ENST00000618856 KCNQ1P51787 676 aa8.97□□□□□ -0.97
NEK3-209ENST00000618856 CLCN4P51793 760 aa8.97□□□□□ -0.97
NEK3-209ENST00000618856 WNT7BP56706 349 aa8.97□□□□□ -0.97
NEK3-209ENST00000618856 RBM10P98175 930 aaKnown RBP8.97□□□□□ -0.97
NEK3-209ENST00000618856 PPP2R3AQ06190 1150 aa8.97□□□□□ -0.97
NEK3-209ENST00000618856 BMS1Q14692 1282 aaKnown RBP8.97□□□□□ -0.97
NEK3-209ENST00000618856 SKIV2LQ15477 1246 aaKnown RBP8.97□□□□□ -0.97
NEK3-209ENST00000618856 COBLL1Q53SF7 1204 aa8.97□□□□□ -0.97
NEK3-209ENST00000618856 SYCE2Q6PIF2 218 aa8.97□□□□□ -0.97
NEK3-209ENST00000618856 RBM23Q86U06 439 aaKnown RBP8.97□□□□□ -0.97
NEK3-209ENST00000618856 PPFIBP1Q86W92 1011 aa8.97□□□□□ -0.97
NEK3-209ENST00000618856 SLC9A9Q8IVB4 645 aa8.97□□□□□ -0.97
NEK3-209ENST00000618856 HDAC7Q8WUI4 952 aa8.97□□□□□ -0.97
NEK3-209ENST00000618856 AUTS2Q8WXX7 1259 aa8.97□□□□□ -0.97
NEK3-209ENST00000618856 POMGNT1Q8WZA1 660 aa8.97□□□□□ -0.97
NEK3-209ENST00000618856 SUSD6Q92537 303 aa8.97□□□□□ -0.97
NEK3-209ENST00000618856 RPF1Q9H9Y2 349 aaKnown RBP8.97□□□□□ -0.97
NEK3-209ENST00000618856 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.97□□□□□ -0.97
NEK3-209ENST00000618856 AGPAT3Q9NRZ7 376 aa8.97□□□□□ -0.97
NEK3-209ENST00000618856 DMAC2Q9NW81 257 aa8.97□□□□□ -0.97
NEK3-209ENST00000618856 CLDND1Q9NY35 253 aa8.97□□□□□ -0.97
NEK3-209ENST00000618856 BACE2Q9Y5Z0 518 aa8.97□□□□□ -0.97
NEK3-209ENST00000618856 VWA8A3KMH1 1905 aa8.97□□□□□ -0.97
NEK3-209ENST00000618856 H3BQ06 376 aaPredicted RBP8.96□□□□□ -0.98
NEK3-209ENST00000618856 SYN3O14994 580 aa8.96□□□□□ -0.98
NEK3-209ENST00000618856 MBTPS2O43462 519 aa8.96□□□□□ -0.98
NEK3-209ENST00000618856 TRAPPC3O43617 180 aa8.96□□□□□ -0.98
NEK3-209ENST00000618856 GADD45BO75293 160 aaPredicted RBP8.96□□□□□ -0.98
NEK3-209ENST00000618856 IL18RAPO95256 599 aa8.96□□□□□ -0.98
NEK3-209ENST00000618856 URODP06132 367 aa8.96□□□□□ -0.98
NEK3-209ENST00000618856 NFICP08651 508 aa8.96□□□□□ -0.98
NEK3-209ENST00000618856 HOXB8P17481 243 aaPredicted RBP8.96□□□□□ -0.98
NEK3-209ENST00000618856 MATR3P43243 847 aaKnown RBP eCLIP8.96□□□□□ -0.98
NEK3-209ENST00000618856 CREMQ03060 361 aa8.96□□□□□ -0.98
NEK3-209ENST00000618856 SMAD4Q13485 552 aaKnown RBP8.96□□□□□ -0.98
NEK3-209ENST00000618856 MYBPC2Q14324 1141 aa8.96□□□□□ -0.98
NEK3-209ENST00000618856 SMAD2Q15796 467 aaKnown RBP8.96□□□□□ -0.98
NEK3-209ENST00000618856 NFIL3Q16649 462 aa8.96□□□□□ -0.98
NEK3-209ENST00000618856 KNOP1Q1ED39 458 aaKnown RBP8.96□□□□□ -0.98
NEK3-209ENST00000618856 FAM171A1Q5VUB5 890 aa8.96□□□□□ -0.98
NEK3-209ENST00000618856 JADE1Q6IE81 842 aa8.96□□□□□ -0.98
NEK3-209ENST00000618856 ANKRD54Q6NXT1 300 aa8.96□□□□□ -0.98
NEK3-209ENST00000618856 PDXDC1Q6P996 788 aa8.96□□□□□ -0.98
NEK3-209ENST00000618856 EFCAB13Q8IY85 973 aa8.96□□□□□ -0.98
NEK3-209ENST00000618856 GPD1LQ8N335 351 aa8.96□□□□□ -0.98
NEK3-209ENST00000618856 CASP10Q92851 521 aa8.96□□□□□ -0.98
NEK3-209ENST00000618856 KIF12Q96FN5 646 aa8.96□□□□□ -0.98
NEK3-209ENST00000618856 BORCS6Q96GS4 357 aa8.96□□□□□ -0.98
NEK3-209ENST00000618856 SUSD3Q96L08 255 aa8.96□□□□□ -0.98
NEK3-209ENST00000618856 B3GALT6Q96L58 329 aa8.96□□□□□ -0.98
NEK3-209ENST00000618856 CLSTN3Q9BQT9 956 aa8.96□□□□□ -0.98
NEK3-209ENST00000618856 FAM213AQ9BRX8 229 aa8.96□□□□□ -0.98
NEK3-209ENST00000618856 TTPALQ9BTX7 342 aa8.96□□□□□ -0.98
NEK3-209ENST00000618856 EMILIN2Q9BXX0 1053 aa8.96□□□□□ -0.98
NEK3-209ENST00000618856 GZF1Q9H116 711 aaPredicted RBP8.96□□□□□ -0.98
NEK3-209ENST00000618856 IGFLR1Q9H665 355 aa8.96□□□□□ -0.98
NEK3-209ENST00000618856 KIAA1586Q9HCI6 787 aa8.96□□□□□ -0.98
NEK3-209ENST00000618856 SLC39A2Q9NP94 309 aa8.96□□□□□ -0.98
NEK3-209ENST00000618856 HSPBP1Q9NZL4 362 aa8.96□□□□□ -0.98
NEK3-209ENST00000618856 MTRRQ9UBK8 725 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms