RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 ADPGKQ9BRR6 497 aa15.74■□□□□ 0.11
COL5A1-208ENST00000618395 ELOVL6Q9H5J4 265 aa15.74■□□□□ 0.11
COL5A1-208ENST00000618395 CYP19A1P11511 503 aaPredicted RBP15.73■□□□□ 0.11
COL5A1-208ENST00000618395 NFKBIAP25963 317 aa15.73■□□□□ 0.11
COL5A1-208ENST00000618395 CCSER1Q9C0I3 900 aa15.73■□□□□ 0.11
COL5A1-208ENST00000618395 GHRP10912 638 aa15.73■□□□□ 0.11
COL5A1-208ENST00000618395 MAGEA10P43363 369 aaPredicted RBP15.73■□□□□ 0.11
COL5A1-208ENST00000618395 SNX13Q9Y5W8 968 aa15.73■□□□□ 0.11
COL5A1-208ENST00000618395 CDHR2Q9BYE9 1310 aa15.73■□□□□ 0.11
COL5A1-208ENST00000618395 GTF2H1P32780 548 aa15.73■□□□□ 0.11
COL5A1-208ENST00000618395 PFASO15067 1338 aa15.73■□□□□ 0.11
COL5A1-208ENST00000618395 STX5Q13190 355 aa15.73■□□□□ 0.11
COL5A1-208ENST00000618395 DHX40Q8IX18 779 aaKnown RBP15.73■□□□□ 0.11
COL5A1-208ENST00000618395 ACAD9Q9H845 621 aa15.73■□□□□ 0.11
COL5A1-208ENST00000618395 GALNT8Q9NY28 637 aa15.73■□□□□ 0.11
COL5A1-208ENST00000618395 FNDC3AQ9Y2H6 1198 aaKnown RBP15.73■□□□□ 0.11
COL5A1-208ENST00000618395 ZNF185O15231 689 aa15.73■□□□□ 0.11
COL5A1-208ENST00000618395 PDIA3P30101 505 aaKnown RBP15.73■□□□□ 0.11
COL5A1-208ENST00000618395 KIAA1755Q5JYT7 1200 aa15.73■□□□□ 0.11
COL5A1-208ENST00000618395 SWT1Q5T5J6 900 aaKnown RBP15.73■□□□□ 0.11
COL5A1-208ENST00000618395 NUP85Q9BW27 656 aa15.73■□□□□ 0.11
COL5A1-208ENST00000618395 TMEM206Q9H813 350 aa15.73■□□□□ 0.11
COL5A1-208ENST00000618395 DDAH1O94760 285 aa15.73■□□□□ 0.11
COL5A1-208ENST00000618395 ARSEP51690 589 aa15.73■□□□□ 0.11
COL5A1-208ENST00000618395 GRSF1Q12849 480 aaKnown RBP eCLIP15.73■□□□□ 0.11
COL5A1-208ENST00000618395 ZFP1Q6P2D0 407 aa15.73■□□□□ 0.11
COL5A1-208ENST00000618395 KRT26Q7Z3Y9 468 aa15.73■□□□□ 0.11
COL5A1-208ENST00000618395 PSTPIP2Q9H939 334 aa15.73■□□□□ 0.11
COL5A1-208ENST00000618395 EPB41L4AQ9HCS5 686 aaPredicted RBP15.73■□□□□ 0.11
COL5A1-208ENST00000618395 METTL5Q9NRN9 209 aaKnown RBP15.73■□□□□ 0.11
COL5A1-208ENST00000618395 GGA2Q9UJY4 613 aa15.73■□□□□ 0.11
COL5A1-208ENST00000618395 ZBTB1Q9Y2K1 713 aa15.73■□□□□ 0.11
COL5A1-208ENST00000618395 SRPRBQ9Y5M8 271 aaKnown RBP15.73■□□□□ 0.11
COL5A1-208ENST00000618395 CPA2P48052 419 aa15.73■□□□□ 0.11
COL5A1-208ENST00000618395 NEDD8Q15843 81 aa15.73■□□□□ 0.11
COL5A1-208ENST00000618395 ZBTB49Q6ZSB9 765 aa15.73■□□□□ 0.11
COL5A1-208ENST00000618395 PRG4Q92954 1404 aaPredicted RBP15.72■□□□□ 0.11
COL5A1-208ENST00000618395 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.72■□□□□ 0.11
COL5A1-208ENST00000618395 MAGEA2P43356 314 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 DDR2Q16832 855 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 ZSCAN10Q96SZ4 725 aaPredicted RBP15.72■□□□□ 0.11
COL5A1-208ENST00000618395 AVENQ9NQS1 362 aaPredicted RBP15.72■□□□□ 0.11
COL5A1-208ENST00000618395 FHOD1Q9Y613 1164 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 NESP48681 1621 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 NCK2O43639 380 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 C15orf59Q2T9L4 293 aaPredicted RBP15.72■□□□□ 0.11
COL5A1-208ENST00000618395 METTL13Q8N6R0 699 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 MS4A14Q96JA4 679 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 ZNF624Q9P2J8 865 aaPredicted RBP15.72■□□□□ 0.11
COL5A1-208ENST00000618395 HEY1Q9Y5J3 304 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 WASLO00401 505 aaPredicted RBP15.72■□□□□ 0.11
COL5A1-208ENST00000618395 KCNT1Q5JUK3 1230 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 NEK5Q6P3R8 708 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 FANCBQ8NB91 859 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 INTS13Q9NVM9 706 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 MYL2P10916 166 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 RALGDSQ12967 914 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 PRR23BQ6ZRT6 265 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 ARHGEF19Q8IW93 802 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 FAM129BQ96TA1 746 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 FOXP3Q9BZS1 431 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 GRIP2Q9C0E4 1043 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 IQGAP2Q13576 1575 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 KLHL24Q6TFL4 600 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 POLNQ7Z5Q5 900 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 RDM1Q8NG50 284 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 SCFD1Q8WVM8 642 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 CENPTQ96BT3 561 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 KCNF1Q9H3M0 494 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 RERGLQ9H628 205 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 PALD1Q9ULE6 856 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 TRIM64CA6NLI5 447 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 PTPN4P29074 926 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 LRRC74AQ0VAA2 488 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 ECSITQ9BQ95 431 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 HEMGNQ9BXL5 484 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 UBXN6Q9BZV1 441 aa15.72■□□□□ 0.11
COL5A1-208ENST00000618395 ATP6V1G1O75348 118 aa15.71■□□□□ 0.11
COL5A1-208ENST00000618395 DNAJC3Q13217 504 aa15.71■□□□□ 0.11
COL5A1-208ENST00000618395 RESP18Q5W5W9 173 aa15.71■□□□□ 0.11
COL5A1-208ENST00000618395 WNK4Q96J92 1243 aa15.71■□□□□ 0.11
COL5A1-208ENST00000618395 WDR12Q9GZL7 423 aaKnown RBP15.71■□□□□ 0.11
COL5A1-208ENST00000618395 C12orf4Q9NQ89 552 aa15.71■□□□□ 0.11
COL5A1-208ENST00000618395 NOS1APO75052 506 aaPredicted RBP15.71■□□□□ 0.11
COL5A1-208ENST00000618395 ADD1P35611 737 aaKnown RBP15.71■□□□□ 0.11
COL5A1-208ENST00000618395 ROR1Q01973 937 aa15.71■□□□□ 0.11
COL5A1-208ENST00000618395 ZFP69Q49AA0 526 aa15.71■□□□□ 0.11
COL5A1-208ENST00000618395 RASSF5Q8WWW0 418 aa15.71■□□□□ 0.11
COL5A1-208ENST00000618395 FAM149B1Q96BN6 582 aa15.71■□□□□ 0.11
COL5A1-208ENST00000618395 SERPINB12Q96P63 405 aa15.71■□□□□ 0.11
COL5A1-208ENST00000618395 TUBGCP4Q9UGJ1 667 aa15.71■□□□□ 0.11
COL5A1-208ENST00000618395 NSFL1CQ9UNZ2 370 aaKnown RBP15.71■□□□□ 0.11
COL5A1-208ENST00000618395 ZBTB24O43167 697 aaPredicted RBP15.71■□□□□ 0.11
COL5A1-208ENST00000618395 IST1P53990 364 aa15.71■□□□□ 0.11
COL5A1-208ENST00000618395 V9GYQ6 96 aa15.71■□□□□ 0.11
COL5A1-208ENST00000618395 MROH7Q68CQ1 1323 aa15.71■□□□□ 0.11
COL5A1-208ENST00000618395 ARHGAP31Q2M1Z3 1444 aa15.71■□□□□ 0.11
COL5A1-208ENST00000618395 TTC39BQ5VTQ0 682 aaPredicted RBP15.71■□□□□ 0.11
COL5A1-208ENST00000618395 RASGRP2Q7LDG7 609 aa15.71■□□□□ 0.11
COL5A1-208ENST00000618395 GALNT6Q8NCL4 622 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms