RNA–Protein interactions for RNA: ENST00000618227.1

MALAT1-213, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 593 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-213ENST00000618227 STK39Q9UEW8 545 aa17.08■□□□□ 0.32
MALAT1-213ENST00000618227 LIMA1Q9UHB6 759 aaKnown RBP17.08■□□□□ 0.32
MALAT1-213ENST00000618227 MSRAQ9UJ68 235 aa17.08■□□□□ 0.32
MALAT1-213ENST00000618227 MTIF2P46199 727 aaKnown RBP17.07■□□□□ 0.32
MALAT1-213ENST00000618227 ALDH7A1P49419 539 aaKnown RBP17.07■□□□□ 0.32
MALAT1-213ENST00000618227 DLG4P78352 724 aa17.07■□□□□ 0.32
MALAT1-213ENST00000618227 RBP5P82980 135 aa17.07■□□□□ 0.32
MALAT1-213ENST00000618227 GLRA4Q5JXX5 417 aa17.07■□□□□ 0.32
MALAT1-213ENST00000618227 KRT39Q6A163 491 aa17.07■□□□□ 0.32
MALAT1-213ENST00000618227 TRAPPC11Q7Z392 1133 aa17.07■□□□□ 0.32
MALAT1-213ENST00000618227 LUZP1Q86V48 1076 aa17.07■□□□□ 0.32
MALAT1-213ENST00000618227 ZNF280BQ86YH2 543 aa17.07■□□□□ 0.32
MALAT1-213ENST00000618227 LRRC52Q8N7C0 313 aa17.07■□□□□ 0.32
MALAT1-213ENST00000618227 CXorf38Q8TB03 319 aa17.07■□□□□ 0.32
MALAT1-213ENST00000618227 ZNF516Q92618 1163 aa17.07■□□□□ 0.32
MALAT1-213ENST00000618227 TUBGCP2Q9BSJ2 902 aa17.07■□□□□ 0.32
MALAT1-213ENST00000618227 COLEC11Q9BWP8 271 aa17.07■□□□□ 0.32
MALAT1-213ENST00000618227 COQ4Q9Y3A0 265 aa17.07■□□□□ 0.32
MALAT1-213ENST00000618227 MRPL42Q9Y6G3 142 aaKnown RBP17.07■□□□□ 0.32
MALAT1-213ENST00000618227 CITO14578 2027 aa17.07■□□□□ 0.32
MALAT1-213ENST00000618227 RALGAPA2Q2PPJ7 1873 aa17.07■□□□□ 0.32
MALAT1-213ENST00000618227 PTPRJQ12913 1337 aa17.06■□□□□ 0.32
MALAT1-213ENST00000618227 GTPBP10A4D1E9 387 aaKnown RBP17.06■□□□□ 0.32
MALAT1-213ENST00000618227 PIRO00625 290 aa17.06■□□□□ 0.32
MALAT1-213ENST00000618227 STAU1O95793 577 aaKnown RBP17.06■□□□□ 0.32
MALAT1-213ENST00000618227 AFPP02771 609 aaKnown RBP17.06■□□□□ 0.32
MALAT1-213ENST00000618227 RB1P06400 928 aa17.06■□□□□ 0.32
MALAT1-213ENST00000618227 GALTP07902 379 aa17.06■□□□□ 0.32
MALAT1-213ENST00000618227 TPM2P07951 284 aa17.06■□□□□ 0.32
MALAT1-213ENST00000618227 LINC00271P0C7V0 271 aa17.06■□□□□ 0.32
MALAT1-213ENST00000618227 CDK11BP21127 795 aaKnown RBP17.06■□□□□ 0.32
MALAT1-213ENST00000618227 ATICP31939 592 aa17.06■□□□□ 0.32
MALAT1-213ENST00000618227 PPM1AP35813 382 aa17.06■□□□□ 0.32
MALAT1-213ENST00000618227 PNPLA4P41247 253 aa17.06■□□□□ 0.32
MALAT1-213ENST00000618227 SOX4Q06945 474 aaPredicted RBP17.06■□□□□ 0.32
MALAT1-213ENST00000618227 PPP3CAQ08209 521 aa17.06■□□□□ 0.32
MALAT1-213ENST00000618227 CETN1Q12798 172 aa17.06■□□□□ 0.32
MALAT1-213ENST00000618227 KCNH2Q12809 1159 aa17.06■□□□□ 0.32
MALAT1-213ENST00000618227 UPP1Q16831 310 aa17.06■□□□□ 0.32
MALAT1-213ENST00000618227 PAN2Q504Q3 1202 aaKnown RBP17.06■□□□□ 0.32
MALAT1-213ENST00000618227 TCERG1LQ5VWI1 586 aa17.06■□□□□ 0.32
MALAT1-213ENST00000618227 SMYD5Q6GMV2 418 aa17.06■□□□□ 0.32
MALAT1-213ENST00000618227 FAM109BQ6ICB4 259 aaPredicted RBP17.06■□□□□ 0.32
MALAT1-213ENST00000618227 SV2AQ7L0J3 742 aa17.06■□□□□ 0.32
MALAT1-213ENST00000618227 C1orf127Q8N9H9 656 aa17.06■□□□□ 0.32
MALAT1-213ENST00000618227 OR5B17Q8NGF7 314 aa17.06■□□□□ 0.32
MALAT1-213ENST00000618227 TAF4BQ92750 862 aa17.06■□□□□ 0.32
MALAT1-213ENST00000618227 C18orf25Q96B23 403 aaPredicted RBP17.06■□□□□ 0.32
MALAT1-213ENST00000618227 FAXDC2Q96IV6 333 aa17.06■□□□□ 0.32
MALAT1-213ENST00000618227 ZNF558Q96NG5 402 aa17.06■□□□□ 0.32
MALAT1-213ENST00000618227 POP1Q99575 1024 aaKnown RBP17.06■□□□□ 0.32
MALAT1-213ENST00000618227 MTMR12Q9C0I1 747 aa17.06■□□□□ 0.32
MALAT1-213ENST00000618227 COLQQ9Y215 455 aaPredicted RBP17.06■□□□□ 0.32
MALAT1-213ENST00000618227 FAN1Q9Y2M0 1017 aa17.06■□□□□ 0.32
MALAT1-213ENST00000618227 LINC01553A4QN01 128 aa17.05■□□□□ 0.32
MALAT1-213ENST00000618227 C5orf67F2Z3F1 127 aa17.05■□□□□ 0.32
MALAT1-213ENST00000618227 BMPR1AP36894 532 aa17.05■□□□□ 0.32
MALAT1-213ENST00000618227 FMO5P49326 533 aa17.05■□□□□ 0.32
MALAT1-213ENST00000618227 MXI1P50539 228 aa17.05■□□□□ 0.32
MALAT1-213ENST00000618227 RABGGTBP53611 331 aa17.05■□□□□ 0.32
MALAT1-213ENST00000618227 BCAR1P56945 870 aa17.05■□□□□ 0.32
MALAT1-213ENST00000618227 KRT31Q15323 416 aa17.05■□□□□ 0.32
MALAT1-213ENST00000618227 VWA3BQ502W6 1294 aa17.05■□□□□ 0.32
MALAT1-213ENST00000618227 DCAF17Q5H9S7 520 aaPredicted RBP17.05■□□□□ 0.32
MALAT1-213ENST00000618227 C9orf57Q5W0N0 161 aa17.05■□□□□ 0.32
MALAT1-213ENST00000618227 KCNT2Q6UVM3 1135 aa17.05■□□□□ 0.32
MALAT1-213ENST00000618227 PBX4Q9BYU1 374 aa17.05■□□□□ 0.32
MALAT1-213ENST00000618227 VRTNQ9H8Y1 702 aa17.05■□□□□ 0.32
MALAT1-213ENST00000618227 TUBGCP4Q9UGJ1 667 aa17.05■□□□□ 0.32
MALAT1-213ENST00000618227 R3HCC1Q9Y3T6 440 aaKnown RBP17.05■□□□□ 0.32
MALAT1-213ENST00000618227 PCDHB12Q9Y5F1 795 aa17.05■□□□□ 0.32
MALAT1-213ENST00000618227 PTPRSQ13332 1948 aa17.05■□□□□ 0.32
MALAT1-213ENST00000618227 FNDC1Q4ZHG4 1894 aaPredicted RBP17.05■□□□□ 0.32
MALAT1-213ENST00000618227 TMEM265A0A087WTH1 108 aa17.04■□□□□ 0.32
MALAT1-213ENST00000618227 GRXCR1A8MXD5 290 aa17.04■□□□□ 0.32
MALAT1-213ENST00000618227 PODXLO00592 558 aa17.04■□□□□ 0.32
MALAT1-213ENST00000618227 NRP1O14786 923 aa17.04■□□□□ 0.32
MALAT1-213ENST00000618227 ZC3H11AO75152 810 aaKnown RBP eCLIP17.04■□□□□ 0.32
MALAT1-213ENST00000618227 TRIM49P0CI25 452 aa17.04■□□□□ 0.32
MALAT1-213ENST00000618227 TRIM49CP0CI26 452 aa17.04■□□□□ 0.32
MALAT1-213ENST00000618227 GCLMP48507 274 aa17.04■□□□□ 0.32
MALAT1-213ENST00000618227 SLC11A1P49279 550 aa17.04■□□□□ 0.32
MALAT1-213ENST00000618227 ERVK-21P61565 698 aa17.04■□□□□ 0.32
MALAT1-213ENST00000618227 TDRD10Q5VZ19 366 aaKnown RBP17.04■□□□□ 0.32
MALAT1-213ENST00000618227 SLC39A11Q8N1S5 342 aa17.04■□□□□ 0.32
MALAT1-213ENST00000618227 COLGALT1Q8NBJ5 622 aa17.04■□□□□ 0.32
MALAT1-213ENST00000618227 FBXL13Q8NEE6 735 aa17.04■□□□□ 0.32
MALAT1-213ENST00000618227 ZNF560Q96MR9 790 aa17.04■□□□□ 0.32
MALAT1-213ENST00000618227 NDST4Q9H3R1 872 aa17.04■□□□□ 0.32
MALAT1-213ENST00000618227 SPG21Q9NZD8 308 aa17.04■□□□□ 0.32
MALAT1-213ENST00000618227 DNAJB4Q9UDY4 337 aa17.04■□□□□ 0.32
MALAT1-213ENST00000618227 SIX4Q9UIU6 781 aa17.04■□□□□ 0.32
MALAT1-213ENST00000618227 ARHGEF37A1IGU5 675 aa17.03■□□□□ 0.32
MALAT1-213ENST00000618227 LCHNA4D1U4 455 aa17.03■□□□□ 0.32
MALAT1-213ENST00000618227 TRAPPC3O43617 180 aa17.03■□□□□ 0.32
MALAT1-213ENST00000618227 B4GALT3O60512 393 aa17.03■□□□□ 0.32
MALAT1-213ENST00000618227 PHACTR2O75167 634 aa17.03■□□□□ 0.32
MALAT1-213ENST00000618227 ITGB3P05106 788 aa17.03■□□□□ 0.32
MALAT1-213ENST00000618227 CA3P07451 260 aa17.03■□□□□ 0.32
MALAT1-213ENST00000618227 FAM163BP0C2L3 166 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms