RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 MAGOHBQ96A72 148 aaKnown RBP13.27□□□□□ -0.29
CIITA-212ENST00000618207 FAM118BQ9BPY3 351 aa13.27□□□□□ -0.29
CIITA-212ENST00000618207 MINDY3Q9H8M7 445 aa13.27□□□□□ -0.29
CIITA-212ENST00000618207 GTF3C4Q9UKN8 822 aa13.27□□□□□ -0.29
CIITA-212ENST00000618207 UTP11Q9Y3A2 253 aaKnown RBP13.27□□□□□ -0.29
CIITA-212ENST00000618207 DAAM1Q9Y4D1 1078 aa13.27□□□□□ -0.29
CIITA-212ENST00000618207 GOLGA6L10A0A0M3HER8 536 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 ZBTB42B2RXF5 422 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 O00370 1275 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 ZNF286BP0CG31 522 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 ECHS1P30084 290 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 MYL6P60660 151 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 DR1Q01658 176 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 PPIL2Q13356 520 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 ORC1Q13415 861 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 SNX1Q13596 522 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 MOGSQ13724 837 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 TTMPQ5BVD1 217 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 SEL1L2Q5TEA6 688 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 EEF1DP3Q658K8 133 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 ARMC9Q7Z3E5 817 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 PLCD4Q9BRC7 762 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 MRPL4Q9BYD3 311 aaKnown RBP13.26□□□□□ -0.29
CIITA-212ENST00000618207 NXF1Q9UBU9 619 aaKnown RBP13.26□□□□□ -0.29
CIITA-212ENST00000618207 PLAAQ9Y263 795 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 PCDHB2Q9Y5E7 798 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 CNTNAP2Q9UHC6 1331 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 LDHAP00338 332 aaKnown RBP13.26□□□□□ -0.29
CIITA-212ENST00000618207 HNRNPH2P55795 449 aaKnown RBP13.26□□□□□ -0.29
CIITA-212ENST00000618207 CEP85LQ5SZL2 805 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 ZFYVE27Q5T4F4 411 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 ZBTB8OSQ8IWT0 167 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 MSL3Q8N5Y2 521 aaKnown RBP13.26□□□□□ -0.29
CIITA-212ENST00000618207 RBBP8NLQ8NC74 664 aaPredicted RBP13.26□□□□□ -0.29
CIITA-212ENST00000618207 FAM76AQ8TAV0 307 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 MPHOSPH6Q99547 160 aaKnown RBP13.26□□□□□ -0.29
CIITA-212ENST00000618207 CGRRF1Q99675 332 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 IMPG2Q9BZV3 1241 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 STYXL1Q9Y6J8 313 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 TOM1L1O75674 476 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 PLTPP55058 493 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 ZNF568Q3ZCX4 644 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 C11orf63Q6NUN7 778 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 ARMCX2Q7L311 632 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 FASTKD5Q7L8L6 764 aaKnown RBP13.26□□□□□ -0.29
CIITA-212ENST00000618207 MCOLN2Q8IZK6 566 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 ATP8B4Q8TF62 1192 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 C1orf54Q8WWF1 131 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 KCNH4Q9UQ05 1017 aa13.26□□□□□ -0.29
CIITA-212ENST00000618207 CYP1A2P05177 515 aa13.25□□□□□ -0.29
CIITA-212ENST00000618207 TNFRSF8P28908 595 aa13.25□□□□□ -0.29
CIITA-212ENST00000618207 IER5Q5VY09 327 aa13.25□□□□□ -0.29
CIITA-212ENST00000618207 MMS22LQ6ZRQ5 1243 aa13.25□□□□□ -0.29
CIITA-212ENST00000618207 PRELID2Q8N945 189 aa13.25□□□□□ -0.29
CIITA-212ENST00000618207 UHMK1Q8TAS1 419 aaKnown RBP13.25□□□□□ -0.29
CIITA-212ENST00000618207 PIK3R5Q8WYR1 880 aa13.25□□□□□ -0.29
CIITA-212ENST00000618207 ACO2Q99798 780 aaKnown RBP13.25□□□□□ -0.29
CIITA-212ENST00000618207 HEMGNQ9BXL5 484 aa13.25□□□□□ -0.29
CIITA-212ENST00000618207 KLHL11Q9NVR0 708 aa13.25□□□□□ -0.29
CIITA-212ENST00000618207 ATP8A1Q9Y2Q0 1164 aa13.25□□□□□ -0.29
CIITA-212ENST00000618207 ADGRA2Q96PE1 1338 aa13.25□□□□□ -0.29
CIITA-212ENST00000618207 VTNP04004 478 aa13.25□□□□□ -0.29
CIITA-212ENST00000618207 CLTAP09496 248 aa13.25□□□□□ -0.29
CIITA-212ENST00000618207 IQCF3P0C7M6 154 aa13.25□□□□□ -0.29
CIITA-212ENST00000618207 UNGP13051 313 aaPredicted RBP13.25□□□□□ -0.29
CIITA-212ENST00000618207 ADCYAP1R1P41586 468 aa13.25□□□□□ -0.29
CIITA-212ENST00000618207 PEX5P50542 639 aa13.25□□□□□ -0.29
CIITA-212ENST00000618207 DHX9Q08211 1270 aaKnown RBP13.25□□□□□ -0.29
CIITA-212ENST00000618207 FOXR1Q6PIV2 292 aa13.25□□□□□ -0.29
CIITA-212ENST00000618207 CCDC50Q8IVM0 306 aa13.25□□□□□ -0.29
CIITA-212ENST00000618207 CCDC105Q8IYK2 499 aa13.25□□□□□ -0.29
CIITA-212ENST00000618207 RUBCNQ92622 972 aa13.25□□□□□ -0.29
CIITA-212ENST00000618207 ADAM22Q9P0K1 906 aa13.25□□□□□ -0.29
CIITA-212ENST00000618207 ATP8B3O60423 1300 aa13.25□□□□□ -0.29
CIITA-212ENST00000618207 MIF4GDA9UHW6 222 aaKnown RBP13.24□□□□□ -0.29
CIITA-212ENST00000618207 MYO1FO00160 1098 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 OPA1O60313 960 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 TMEM191BP0C7N4 346 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 CXCL8P10145 99 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 ACO1P21399 889 aaKnown RBP13.24□□□□□ -0.29
CIITA-212ENST00000618207 ADORA2AP29274 412 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 CTNNA1P35221 906 aaKnown RBP13.24□□□□□ -0.29
CIITA-212ENST00000618207 HSD17B3P37058 310 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 RAP1GAPP47736 663 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 PTENP60484 403 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 NNTQ13423 1086 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 TRPC3Q13507 836 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 TTLL4Q14679 1199 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 GPR162Q16538 588 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 ZSCAN26Q16670 478 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 TTC27Q6P3X3 843 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 LEKR1Q6ZMV7 388 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 WHAMMQ8TF30 809 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 ATG4AQ8WYN0 398 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 CPB2Q96IY4 423 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 FAM167AQ96KS9 214 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 SCLT1Q96NL6 688 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 SLITRK6Q9H5Y7 841 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 TMEM134Q9H6X4 195 aa13.24□□□□□ -0.29
CIITA-212ENST00000618207 AKT3Q9Y243 479 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms