RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 OOSP2Q86WS3 158 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 TRIM48Q8IWZ4 208 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 FAM161BQ96MY7 647 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 INTS2Q9H0H0 1204 aaKnown RBP11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 STN1Q9H668 368 aaKnown RBP11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 LY9Q9HBG7 655 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 ARHGEF38Q9NXL2 777 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 MYH9P35579 1960 aaKnown RBP11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 ANO9A1A5B4 782 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 APOA4P06727 396 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 CCDC159P0C7I6 412 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 SV2CQ496J9 727 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 CALML6Q8TD86 181 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 SENP7Q9BQF6 1050 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 ADNPQ9H2P0 1102 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 BLOC1S6Q9UL45 172 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 WDR47O94967 919 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 PYGMP11217 842 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 STAT5BP51692 787 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 SREBF2Q12772 1141 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 RFFLQ8WZ73 363 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 CFAP73A6NFT4 308 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 TRPC1P48995 793 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 MTMR2Q13614 643 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 CUL4AQ13619 759 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 HIC1Q14526 733 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 PCYOX1LQ8NBM8 494 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 ZFYVE28Q9HCC9 887 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 A2ML1A8K2U0 1454 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 PCSK1P29120 753 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 TP53BP2Q13625 1128 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 SLC9A5Q14940 896 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 TXNRD1Q16881 649 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 CLASP2O75122 1294 aaKnown RBP11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 ACADSBP45954 432 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 WWP1Q9H0M0 922 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 KCND2Q9NZV8 630 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 SLC25A13Q9UJS0 675 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 PRKCBP05771 671 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 UGT3A1Q6NUS8 523 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 HS6ST3Q8IZP7 471 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 NMRK1Q9NWW6 199 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 VPS9D1Q9Y2B5 631 aa11.73□□□□□ -0.53
CCDC144B-208ENST00000618081 FAM107AO95990 144 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 PDHA1P08559 390 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 BRAFP15056 766 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 COG2Q14746 738 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 DTNAQ9Y4J8 743 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 NPEPPSP55786 919 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 KRT17Q04695 432 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 IZUMO3Q5VZ72 239 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 MTFR1Q15390 333 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 VPS37AQ8NEZ2 397 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 PALMDQ9NP74 551 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 GOLGA8RI6L899 631 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 HSPA9P38646 679 aaKnown RBP11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 PTRHD1Q6GMV3 140 aaKnown RBP11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 PLD3Q8IV08 490 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 ARHGEF26Q96DR7 871 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 AIFM3Q96NN9 605 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 ERVK-7P63135 1459 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 CEP55Q53EZ4 464 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 ZNF746Q6NUN9 644 aaPredicted RBP11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 KDELC2Q7Z4H8 507 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 HORMAD1Q86X24 394 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 CD274Q9NZQ7 290 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 ZNF229Q9UJW7 825 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 ATP11BQ9Y2G3 1177 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 TRIM49BA6NDI0 452 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 SLC16A3O15427 465 aaKnown RBP11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 COBLL1Q53SF7 1204 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 GLB1LQ6UWU2 654 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 SHCBP1Q8NEM2 672 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 PPP1R36Q96LQ0 422 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 SEPT5Q99719 369 aaPredicted RBP11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 SLC30A1Q9Y6M5 507 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 C19orf81C9J6K1 198 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 STAT4Q14765 748 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 ARHGAP18Q8N392 663 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 GFM2Q969S9 779 aaKnown RBP11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 TMEM245Q9H330 911 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 PPCSQ9HAB8 311 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 HDAC6Q9UBN7 1215 aa11.72□□□□□ -0.53
CCDC144B-208ENST00000618081 C16orf96A6NNT2 1141 aa11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 SUPT3HB4E1H0 165 aa11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 ZBTB7AO95365 584 aa11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 MYL2P10916 166 aa11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 MLNP12872 115 aa11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 GGCXP38435 758 aa11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 C16orf89Q6UX73 402 aa11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 AGR3Q8TD06 166 aa11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 ELMO2Q96JJ3 720 aa11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 CLMNQ96JQ2 1002 aa11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 MTA3Q9BTC8 594 aa11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 MAN1C1Q9NR34 630 aa11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 A0A087WWV3 80 aa11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 DGAT1O75907 488 aa11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 PRDX5P30044 214 aa11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 NLRP11P59045 1033 aaKnown RBP11.71□□□□□ -0.53
CCDC144B-208ENST00000618081 HLFQ16534 295 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms