RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 MAP7Q14244 749 aa11.58□□□□□ -0.56
POLR2A-209ENST00000617998 HIC1Q14526 733 aa11.58□□□□□ -0.56
POLR2A-209ENST00000617998 ATL2Q8NHH9 583 aa11.58□□□□□ -0.56
POLR2A-209ENST00000617998 IFT81Q8WYA0 676 aa11.58□□□□□ -0.56
POLR2A-209ENST00000617998 PABPC5Q96DU9 382 aaKnown RBP11.58□□□□□ -0.56
POLR2A-209ENST00000617998 RPRD1AQ96P16 312 aaPredicted RBP11.58□□□□□ -0.56
POLR2A-209ENST00000617998 ADAM22Q9P0K1 906 aa11.58□□□□□ -0.56
POLR2A-209ENST00000617998 ABHD14A-ACY1A0A1B0GW23 586 aa11.58□□□□□ -0.56
POLR2A-209ENST00000617998 NR3C1P04150 777 aa11.58□□□□□ -0.56
POLR2A-209ENST00000617998 SERPINB6P35237 376 aa11.58□□□□□ -0.56
POLR2A-209ENST00000617998 SNW1Q13573 536 aaKnown RBP11.58□□□□□ -0.56
POLR2A-209ENST00000617998 CASP10Q92851 521 aa11.58□□□□□ -0.56
POLR2A-209ENST00000617998 SPATA6Q9NWH7 488 aaPredicted RBP11.58□□□□□ -0.56
POLR2A-209ENST00000617998 BCL9LQ86UU0 1499 aa11.58□□□□□ -0.56
POLR2A-209ENST00000617998 ASTN2O75129 1339 aaPredicted RBP11.58□□□□□ -0.56
POLR2A-209ENST00000617998 NT5C1B-RDH14C9J2C7 533 aa11.58□□□□□ -0.56
POLR2A-209ENST00000617998 PRMT3O60678 531 aa11.58□□□□□ -0.56
POLR2A-209ENST00000617998 ITGB3P05106 788 aa11.58□□□□□ -0.56
POLR2A-209ENST00000617998 RGS7P49802 495 aa11.58□□□□□ -0.56
POLR2A-209ENST00000617998 DUSP28Q4G0W2 176 aa11.58□□□□□ -0.56
POLR2A-209ENST00000617998 CCDC13Q8IYE1 715 aa11.58□□□□□ -0.56
POLR2A-209ENST00000617998 PIK3R2O00459 728 aa11.58□□□□□ -0.56
POLR2A-209ENST00000617998 ERVK-10P10266 1014 aa11.58□□□□□ -0.56
POLR2A-209ENST00000617998 ACO1P21399 889 aaKnown RBP11.58□□□□□ -0.56
POLR2A-209ENST00000617998 LONRF2Q1L5Z9 754 aa11.58□□□□□ -0.56
POLR2A-209ENST00000617998 UROC1Q96N76 676 aa11.58□□□□□ -0.56
POLR2A-209ENST00000617998 NKX2-4Q9H2Z4 354 aa11.58□□□□□ -0.56
POLR2A-209ENST00000617998 PCDHAC2Q9Y5I4 1007 aa11.58□□□□□ -0.56
POLR2A-209ENST00000617998 GFPT2O94808 682 aa11.58□□□□□ -0.56
POLR2A-209ENST00000617998 IVLP07476 585 aa11.58□□□□□ -0.56
POLR2A-209ENST00000617998 TPD52P55327 224 aaPredicted RBP11.58□□□□□ -0.56
POLR2A-209ENST00000617998 CUL1Q13616 776 aa11.58□□□□□ -0.56
POLR2A-209ENST00000617998 CNKSR3Q6P9H4 555 aa11.58□□□□□ -0.56
POLR2A-209ENST00000617998 ZNF513Q8N8E2 541 aaPredicted RBP11.58□□□□□ -0.56
POLR2A-209ENST00000617998 PPME1Q9Y570 386 aa11.58□□□□□ -0.56
POLR2A-209ENST00000617998 NCAM1P13591 858 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 AP1B1Q10567 949 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 MPZL3Q6UWV2 235 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 SERPINA13PQ6UXR4 307 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 LEKR1Q6ZMV7 388 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 VPS50Q96JG6 964 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 MAML3Q96JK9 1138 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 GAD1Q99259 594 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 TRIM31Q9BZY9 425 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 OSGEPL1Q9H4B0 414 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 CTAGE15A4D2H0 777 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 DNM1LO00429 736 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 FOXN1O15353 648 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 CCL16O15467 120 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 PRPF4O43172 522 aaKnown RBP eCLIP11.57□□□□□ -0.56
POLR2A-209ENST00000617998 CTAGE8P0CG41 777 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 AASDHQ4L235 1098 aaPredicted RBP11.57□□□□□ -0.56
POLR2A-209ENST00000617998 CTAGE6Q86UF2 777 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 CTAGE4Q8IX94 777 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 SMC6Q96SB8 1091 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 PORCNQ9H237 461 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 DHX35Q9H5Z1 703 aaKnown RBP11.57□□□□□ -0.56
POLR2A-209ENST00000617998 SAGE1Q9NXZ1 904 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 A0A0G2JLL6 359 aaPredicted RBP11.57□□□□□ -0.56
POLR2A-209ENST00000617998 BUB1O43683 1085 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 PAPOLAP51003 745 aaKnown RBP11.57□□□□□ -0.56
POLR2A-209ENST00000617998 NSUN2Q08J23 767 aaKnown RBP eCLIP11.57□□□□□ -0.56
POLR2A-209ENST00000617998 MAPK8IP2Q13387 824 aaPredicted RBP11.57□□□□□ -0.56
POLR2A-209ENST00000617998 PRRT2Q7Z6L0 340 aaPredicted RBP11.57□□□□□ -0.56
POLR2A-209ENST00000617998 TRAPPC12Q8WVT3 735 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 SPATA16Q9BXB7 569 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 DCLK3Q9C098 648 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 CLIC4Q9Y696 253 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 RTN3O95197 1032 aaPredicted RBP11.57□□□□□ -0.56
POLR2A-209ENST00000617998 VPS41P49754 854 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 PFKPQ01813 784 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 LAMTOR4Q0VGL1 99 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 NCOA4Q13772 614 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 KRBA2Q6ZNG9 492 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 SDCCAG8Q86SQ7 713 aaPredicted RBP11.57□□□□□ -0.56
POLR2A-209ENST00000617998 ZCCHC17Q9NP64 241 aaKnown RBP11.57□□□□□ -0.56
POLR2A-209ENST00000617998 ST3GAL5Q9UNP4 418 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 TIMM13Q9Y5L4 95 aaPredicted RBP11.57□□□□□ -0.56
POLR2A-209ENST00000617998 ADH1CP00326 375 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 CCND3P30281 292 aaPredicted RBP11.57□□□□□ -0.56
POLR2A-209ENST00000617998 ADCY8P40145 1251 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 SUZ12Q15022 739 aaKnown RBP11.57□□□□□ -0.56
POLR2A-209ENST00000617998 TTC19Q6DKK2 380 aaPredicted RBP11.57□□□□□ -0.56
POLR2A-209ENST00000617998 TMCO3Q6UWJ1 677 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 DLK2Q6UY11 383 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 SLC9A7Q96T83 725 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 UNC45AQ9H3U1 944 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 CATSPERBQ9H7T0 1116 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 CEMIPQ8WUJ3 1361 aa11.57□□□□□ -0.56
POLR2A-209ENST00000617998 LRRC32Q14392 662 aa11.56□□□□□ -0.56
POLR2A-209ENST00000617998 NAA30Q147X3 362 aaPredicted RBP11.56□□□□□ -0.56
POLR2A-209ENST00000617998 ERAP2Q6P179 960 aa11.56□□□□□ -0.56
POLR2A-209ENST00000617998 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.56□□□□□ -0.563e-31■■■□□ 18.2
POLR2A-209ENST00000617998 FBXO44Q9H4M3 255 aa11.56□□□□□ -0.56
POLR2A-209ENST00000617998 DNTTP04053 509 aa11.56□□□□□ -0.56
POLR2A-209ENST00000617998 GCKP35557 465 aa11.56□□□□□ -0.56
POLR2A-209ENST00000617998 PRKAA1Q13131 559 aa11.56□□□□□ -0.56
POLR2A-209ENST00000617998 CERS5Q8N5B7 392 aa11.56□□□□□ -0.56
POLR2A-209ENST00000617998 USP28Q96RU2 1077 aa11.56□□□□□ -0.56
POLR2A-209ENST00000617998 CDC25CP30307 473 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms