RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-215ENST00000617958 PPCSQ9HAB8 311 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 SSU72Q9NP77 194 aaKnown RBP11.38□□□□□ -0.59
CPEB1-215ENST00000617958 METTL5Q9NRN9 209 aaKnown RBP11.38□□□□□ -0.59
CPEB1-215ENST00000617958 SPATA7Q9P0W8 599 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 BTBD7Q9P203 1132 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 CACNA1SQ13698 1873 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 A6NJR5 290 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 C6orf229H3BNL8 230 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 RNASEH1O60930 286 aaKnown RBP11.38□□□□□ -0.59
CPEB1-215ENST00000617958 UFL1O94874 794 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 ETS2P15036 469 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 PON1P27169 355 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 MAN1A1P33908 653 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 COPB2P35606 906 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 EMP3P54852 163 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 ASPHQ12797 758 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 RASA2Q15283 850 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 DOK7Q18PE1 504 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.38□□□□□ -0.59
CPEB1-215ENST00000617958 TMEM119Q4V9L6 283 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 FAM26FQ5R3K3 315 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 MAP3K21Q5TCX8 1036 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 SEL1L2Q5TEA6 688 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 AAGABQ6PD74 315 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 ADGRA1Q86SQ6 560 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 CROCCP3Q8IVE0 287 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 MAP7D3Q8IWC1 876 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 NUP93Q8N1F7 819 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 MIGA1Q8NAN2 632 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 U2AF1L4Q8WU68 220 aaKnown RBP11.38□□□□□ -0.59
CPEB1-215ENST00000617958 CORO1BQ9BR76 489 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 OSGEPQ9NPF4 335 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 NDE1Q9NXR1 346 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 PLK2Q9NYY3 685 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.38□□□□□ -0.59
CPEB1-215ENST00000617958 ZNF804BA4D1E1 1349 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 FKBP6O75344 327 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 LGR5O75473 907 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 VEGFAP15692 232 aaPredicted RBP11.37□□□□□ -0.59
CPEB1-215ENST00000617958 PORP16435 677 aaPredicted RBP11.37□□□□□ -0.59
CPEB1-215ENST00000617958 EVX2Q03828 476 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 COASYQ13057 564 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 P3H1Q32P28 736 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 SYDE2Q5VT97 1194 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 DUS1LQ6P1R4 473 aaKnown RBP11.37□□□□□ -0.59
CPEB1-215ENST00000617958 TRABD2AQ86V40 505 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 ZBED8Q8IZ13 594 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 CYP4X1Q8N118 509 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 LARGE2Q8N3Y3 721 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 ZSWIM1Q9BR11 485 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 SYT11Q9BT88 431 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 FOXP3Q9BZS1 431 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 KCTD10Q9H3F6 313 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 TRPV5Q9NQA5 729 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 FAIMQ9NVQ4 179 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 BARHL2Q9NY43 387 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 ROBO3Q96MS0 1386 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 ANKRD62A6NC57 917 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 MINDY4BA8MYZ0 360 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 RASA4BC9J798 803 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 NDC80O14777 642 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 RASA4O43374 803 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 RARBP10826 455 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 MED21Q13503 144 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 C6orf163Q5TEZ5 329 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 BORAQ6PGQ7 559 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 MTDHQ86UE4 582 aaKnown RBP11.37□□□□□ -0.59
CPEB1-215ENST00000617958 CCDC25Q86WR0 208 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 CCDC105Q8IYK2 499 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 PDCD7Q8N8D1 485 aaKnown RBP11.37□□□□□ -0.59
CPEB1-215ENST00000617958 LNX1Q8TBB1 728 aaPredicted RBP11.37□□□□□ -0.59
CPEB1-215ENST00000617958 RASGRP4Q8TDF6 673 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 ZNF384Q8TF68 577 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 GAB3Q8WWW8 586 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 DNAJC19Q96DA6 116 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 PRICKLE1Q96MT3 831 aaPredicted RBP11.37□□□□□ -0.59
CPEB1-215ENST00000617958 RAB34Q9BZG1 259 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 ANKFY1Q9P2R3 1169 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 HDAC9Q9UKV0 1011 aa11.37□□□□□ -0.59
CPEB1-215ENST00000617958 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.37□□□□□ -0.59
CPEB1-215ENST00000617958 COL11A2P13942 1736 aaPredicted RBP11.37□□□□□ -0.59
CPEB1-215ENST00000617958 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.36□□□□□ -0.59
CPEB1-215ENST00000617958 ANKRD63C9JTQ0 380 aa11.36□□□□□ -0.59
CPEB1-215ENST00000617958 THAP12O43422 761 aa11.36□□□□□ -0.59
CPEB1-215ENST00000617958 SORBS3O60504 671 aa11.36□□□□□ -0.59
CPEB1-215ENST00000617958 CSDE1O75534 798 aaKnown RBP11.36□□□□□ -0.59
CPEB1-215ENST00000617958 CDK4P11802 303 aa11.36□□□□□ -0.59
CPEB1-215ENST00000617958 PRDX5P30044 214 aa11.36□□□□□ -0.59
CPEB1-215ENST00000617958 GTF2H1P32780 548 aa11.36□□□□□ -0.59
CPEB1-215ENST00000617958 STAT1P42224 750 aa11.36□□□□□ -0.59
CPEB1-215ENST00000617958 NONOQ15233 471 aaKnown RBP eCLIP11.36□□□□□ -0.59
CPEB1-215ENST00000617958 OTOAQ7RTW8 1153 aa11.36□□□□□ -0.59
CPEB1-215ENST00000617958 PDSS2Q86YH6 399 aa11.36□□□□□ -0.59
CPEB1-215ENST00000617958 SCUBE1Q8IWY4 988 aa11.36□□□□□ -0.59
CPEB1-215ENST00000617958 DTX3LQ8TDB6 740 aa11.36□□□□□ -0.59
CPEB1-215ENST00000617958 SNF8Q96H20 258 aa11.36□□□□□ -0.59
CPEB1-215ENST00000617958 DYDC2Q96IM9 177 aa11.36□□□□□ -0.59
CPEB1-215ENST00000617958 CDK5RAP3Q96JB5 506 aa11.36□□□□□ -0.59
CPEB1-215ENST00000617958 OSBPL8Q9BZF1 889 aa11.36□□□□□ -0.59
CPEB1-215ENST00000617958 WNT8AQ9H1J5 351 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms