RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 MAP4K3Q8IVH8 894 aa27.48■■□□□ 1.99
VEGFA-228ENST00000617771 ASIC4Q96FT7 647 aa27.48■■□□□ 1.99
VEGFA-228ENST00000617771 FIZ1Q96SL8 496 aa27.48■■□□□ 1.99
VEGFA-228ENST00000617771 KCNH6Q9H252 994 aa27.48■■□□□ 1.99
VEGFA-228ENST00000617771 CITO14578 2027 aa27.47■■□□□ 1.99
VEGFA-228ENST00000617771 SYN3O14994 580 aa27.47■■□□□ 1.99
VEGFA-228ENST00000617771 HNRNPA1P09651 372 aaKnown RBP eCLIP27.47■■□□□ 1.99
VEGFA-228ENST00000617771 GBP2P32456 591 aaPredicted RBP27.47■■□□□ 1.99
VEGFA-228ENST00000617771 PPM1LQ5SGD2 360 aa27.47■■□□□ 1.99
VEGFA-228ENST00000617771 DDX12PQ92771 950 aa27.47■■□□□ 1.99
VEGFA-228ENST00000617771 ZNF396Q96N95 335 aaPredicted RBP27.47■■□□□ 1.99
VEGFA-228ENST00000617771 MSTO1Q9BUK6 570 aa27.47■■□□□ 1.99
VEGFA-228ENST00000617771 ST6GALNAC4Q9H4F1 302 aa27.47■■□□□ 1.99
VEGFA-228ENST00000617771 RPF1Q9H9Y2 349 aaKnown RBP27.47■■□□□ 1.99
VEGFA-228ENST00000617771 SEL1LQ9UBV2 794 aa27.47■■□□□ 1.99
VEGFA-228ENST00000617771 CDY1Q9Y6F8 540 aa27.47■■□□□ 1.99
VEGFA-228ENST00000617771 TECTAO75443 2155 aa27.47■■□□□ 1.99
VEGFA-228ENST00000617771 MTCL1Q9Y4B5 1905 aaKnown RBP27.47■■□□□ 1.99
VEGFA-228ENST00000617771 VWA8A3KMH1 1905 aa27.46■■□□□ 1.99
VEGFA-228ENST00000617771 TTC26A0AVF1 554 aa27.46■■□□□ 1.99
VEGFA-228ENST00000617771 C8AP07357 584 aa27.46■■□□□ 1.99
VEGFA-228ENST00000617771 HOXA9P31269 272 aa27.46■■□□□ 1.99
VEGFA-228ENST00000617771 TNFSF9P41273 254 aa27.46■■□□□ 1.99
VEGFA-228ENST00000617771 FBXL6Q8N531 539 aa27.46■■□□□ 1.99
VEGFA-228ENST00000617771 KIF12Q96FN5 646 aa27.46■■□□□ 1.99
VEGFA-228ENST00000617771 TSPAN18Q96SJ8 248 aa27.46■■□□□ 1.99
VEGFA-228ENST00000617771 TUBGCP4Q9UGJ1 667 aa27.46■■□□□ 1.99
VEGFA-228ENST00000617771 A0A0B4J269 797 aa27.45■■□□□ 1.98
VEGFA-228ENST00000617771 XPOTO43592 962 aaKnown RBP27.45■■□□□ 1.98
VEGFA-228ENST00000617771 MCM4P33991 863 aa27.45■■□□□ 1.98
VEGFA-228ENST00000617771 STAT6P42226 847 aa27.45■■□□□ 1.98
VEGFA-228ENST00000617771 UVSSAQ2YD98 709 aa27.45■■□□□ 1.98
VEGFA-228ENST00000617771 VARS2Q5ST30 1063 aaKnown RBP27.45■■□□□ 1.98
VEGFA-228ENST00000617771 SFR1Q86XK3 245 aa27.45■■□□□ 1.98
VEGFA-228ENST00000617771 LINC00301Q8NCQ3 95 aa27.45■■□□□ 1.98
VEGFA-228ENST00000617771 HVCN1Q96D96 273 aa27.45■■□□□ 1.98
VEGFA-228ENST00000617771 UBQLN1Q9UMX0 589 aaKnown RBP27.45■■□□□ 1.98
VEGFA-228ENST00000617771 MYMKA6NI61 221 aa27.44■■□□□ 1.98
VEGFA-228ENST00000617771 H7C4K7 107 aa27.44■■□□□ 1.98
VEGFA-228ENST00000617771 FAM189A1O60320 539 aa27.44■■□□□ 1.98
VEGFA-228ENST00000617771 XYLBO75191 536 aa27.44■■□□□ 1.98
VEGFA-228ENST00000617771 GAP43P17677 238 aa27.44■■□□□ 1.98
VEGFA-228ENST00000617771 CYP3A5P20815 502 aa27.44■■□□□ 1.98
VEGFA-228ENST00000617771 ZC2HC1CQ53FD0 456 aaPredicted RBP27.44■■□□□ 1.98
VEGFA-228ENST00000617771 AXDND1Q5T1B0 1012 aaPredicted RBP27.44■■□□□ 1.98
VEGFA-228ENST00000617771 SLC39A4Q6P5W5 647 aa27.44■■□□□ 1.98
VEGFA-228ENST00000617771 RTL10Q7L3V2 364 aa27.44■■□□□ 1.98
VEGFA-228ENST00000617771 ZNF720Q7Z2F6 126 aa27.44■■□□□ 1.98
VEGFA-228ENST00000617771 SUSD3Q96L08 255 aa27.44■■□□□ 1.98
VEGFA-228ENST00000617771 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.44■■□□□ 1.984e-7■■■■■ 28.5
VEGFA-228ENST00000617771 IGSF9Q9P2J2 1179 aa27.44■■□□□ 1.98
VEGFA-228ENST00000617771 EPS15L1Q9UBC2 864 aa27.44■■□□□ 1.98
VEGFA-228ENST00000617771 LACTBL1A8MY62 500 aa27.43■■□□□ 1.98
VEGFA-228ENST00000617771 SPTLC2O15270 562 aa27.43■■□□□ 1.98
VEGFA-228ENST00000617771 N4BP1O75113 896 aaKnown RBP27.43■■□□□ 1.98
VEGFA-228ENST00000617771 SPAG1Q07617 926 aa27.43■■□□□ 1.98
VEGFA-228ENST00000617771 ENOX2Q16206 610 aaKnown RBP27.43■■□□□ 1.98
VEGFA-228ENST00000617771 ZBTB41Q5SVQ8 909 aa27.43■■□□□ 1.98
VEGFA-228ENST00000617771 SLFN12LQ6IEE8 588 aa27.43■■□□□ 1.98
VEGFA-228ENST00000617771 RSPO2Q6UXX9 243 aaPredicted RBP27.43■■□□□ 1.98
VEGFA-228ENST00000617771 CD302Q8IX05 232 aa27.43■■□□□ 1.98
VEGFA-228ENST00000617771 APPL2Q8NEU8 664 aa27.43■■□□□ 1.98
VEGFA-228ENST00000617771 SLC7A14Q8TBB6 771 aa27.43■■□□□ 1.98
VEGFA-228ENST00000617771 PANK2Q9BZ23 570 aa27.43■■□□□ 1.98
VEGFA-228ENST00000617771 KCNK12Q9HB15 430 aa27.43■■□□□ 1.98
VEGFA-228ENST00000617771 GTF3C3Q9Y5Q9 886 aa27.43■■□□□ 1.98
VEGFA-228ENST00000617771 PPP6R2O75170 966 aa27.42■■□□□ 1.98
VEGFA-228ENST00000617771 POU2F2P09086 479 aa27.42■■□□□ 1.98
VEGFA-228ENST00000617771 LRPAP1P30533 357 aa27.42■■□□□ 1.98
VEGFA-228ENST00000617771 TDGQ13569 410 aa27.42■■□□□ 1.98
VEGFA-228ENST00000617771 ZBTB6Q15916 424 aa27.42■■□□□ 1.98
VEGFA-228ENST00000617771 SLC8B1Q6J4K2 584 aa27.42■■□□□ 1.98
VEGFA-228ENST00000617771 GET4Q7L5D6 327 aaPredicted RBP27.42■■□□□ 1.98
VEGFA-228ENST00000617771 DNAJC19Q96DA6 116 aa27.42■■□□□ 1.98
VEGFA-228ENST00000617771 MYADMQ96S97 322 aa27.42■■□□□ 1.98
VEGFA-228ENST00000617771 MRPL44Q9H9J2 332 aaKnown RBP27.42■■□□□ 1.98
VEGFA-228ENST00000617771 TFIP11Q9UBB9 837 aaKnown RBP27.42■■□□□ 1.98
VEGFA-228ENST00000617771 CPSF3Q9UKF6 684 aaKnown RBP27.42■■□□□ 1.98
VEGFA-228ENST00000617771 TRIOO75962 3097 aa27.42■■□□□ 1.98
VEGFA-228ENST00000617771 PDCD11Q14690 1871 aaKnown RBP27.41■■□□□ 1.98
VEGFA-228ENST00000617771 CCL16O15467 120 aa27.41■■□□□ 1.98
VEGFA-228ENST00000617771 YEATS4O95619 227 aa27.41■■□□□ 1.98
VEGFA-228ENST00000617771 ADRB2P07550 413 aa27.41■■□□□ 1.98
VEGFA-228ENST00000617771 ADALQ6DHV7 355 aa27.41■■□□□ 1.98
VEGFA-228ENST00000617771 GRASPQ7Z6J2 395 aaPredicted RBP27.41■■□□□ 1.98
VEGFA-228ENST00000617771 FAM212AQ96EL1 285 aa27.41■■□□□ 1.98
VEGFA-228ENST00000617771 SMOC2Q9H3U7 446 aa27.41■■□□□ 1.98
VEGFA-228ENST00000617771 PCDHB8Q9UN66 801 aa27.41■■□□□ 1.98
VEGFA-228ENST00000617771 POLIQ9UNA4 740 aa27.41■■□□□ 1.98
VEGFA-228ENST00000617771 ANKRD63C9JTQ0 380 aa27.4■■□□□ 1.98
VEGFA-228ENST00000617771 IDEP14735 1019 aa27.4■■□□□ 1.98
VEGFA-228ENST00000617771 FSHRP23945 695 aa27.4■■□□□ 1.98
VEGFA-228ENST00000617771 ROR1Q01973 937 aa27.4■■□□□ 1.98
VEGFA-228ENST00000617771 MRPL58Q14197 206 aaKnown RBP27.4■■□□□ 1.98
VEGFA-228ENST00000617771 ZNF280DQ6N043 979 aa27.4■■□□□ 1.98
VEGFA-228ENST00000617771 BEST2Q8NFU1 509 aa27.4■■□□□ 1.98
VEGFA-228ENST00000617771 ZNF461Q8TAF7 563 aa27.4■■□□□ 1.98
VEGFA-228ENST00000617771 NXPE3Q969Y0 559 aa27.4■■□□□ 1.98
VEGFA-228ENST00000617771 AGO2Q9UKV8 859 aaKnown RBP27.4■■□□□ 1.98
VEGFA-228ENST00000617771 EXOC7Q9UPT5 735 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms