RNA–Protein interactions for RNA: ENST00000617022.4

DDB2-212, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 2

Gene DDB2, Length 2,181 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-212ENST00000617022 STAG3L1P0CL83 205 aa17.19■□□□□ 0.34
DDB2-212ENST00000617022 CXCL8P10145 99 aa17.19■□□□□ 0.34
DDB2-212ENST00000617022 CLDN10P78369 228 aa17.19■□□□□ 0.34
DDB2-212ENST00000617022 ENPEPQ07075 957 aa17.19■□□□□ 0.34
DDB2-212ENST00000617022 MGAT3Q09327 533 aa17.19■□□□□ 0.34
DDB2-212ENST00000617022 PTK7Q13308 1070 aa17.19■□□□□ 0.34
DDB2-212ENST00000617022 PCBP1Q15365 356 aaKnown RBP eCLIP17.19■□□□□ 0.349e-6■■■□□ 18.2
DDB2-212ENST00000617022 ENOX2Q16206 610 aaKnown RBP17.19■□□□□ 0.34
DDB2-212ENST00000617022 EPC2Q52LR7 807 aa17.19■□□□□ 0.34
DDB2-212ENST00000617022 NOTUMQ6P988 496 aa17.19■□□□□ 0.34
DDB2-212ENST00000617022 FBXO46Q6PJ61 603 aaPredicted RBP17.19■□□□□ 0.34
DDB2-212ENST00000617022 TOGARAM2Q6ZUX3 1019 aa17.19■□□□□ 0.34
DDB2-212ENST00000617022 SV2AQ7L0J3 742 aa17.19■□□□□ 0.34
DDB2-212ENST00000617022 FAM228AQ86W67 206 aa17.19■□□□□ 0.34
DDB2-212ENST00000617022 SLC43A3Q8NBI5 491 aa17.19■□□□□ 0.34
DDB2-212ENST00000617022 OR8K1Q8NGG5 319 aa17.19■□□□□ 0.34
DDB2-212ENST00000617022 LMO3Q8TAP4 145 aa17.19■□□□□ 0.34
DDB2-212ENST00000617022 BAP1Q92560 729 aa17.19■□□□□ 0.34
DDB2-212ENST00000617022 CCDC51Q96ER9 411 aa17.19■□□□□ 0.34
DDB2-212ENST00000617022 DNAJC7Q99615 494 aa17.19■□□□□ 0.34
DDB2-212ENST00000617022 EIF2AQ9BY44 585 aaKnown RBP17.19■□□□□ 0.34
DDB2-212ENST00000617022 SENP6Q9GZR1 1112 aaPredicted RBP17.19■□□□□ 0.34
DDB2-212ENST00000617022 VIPAS39Q9H9C1 493 aa17.19■□□□□ 0.34
DDB2-212ENST00000617022 HSPA1AP0DMV8 641 aaKnown RBP17.19■□□□□ 0.34
DDB2-212ENST00000617022 HSPA1BP0DMV9 641 aaKnown RBP17.19■□□□□ 0.34
DDB2-212ENST00000617022 UCHL3P15374 230 aa17.19■□□□□ 0.34
DDB2-212ENST00000617022 CETN1Q12798 172 aa17.19■□□□□ 0.34
DDB2-212ENST00000617022 RRAGAQ7L523 313 aa17.19■□□□□ 0.34
DDB2-212ENST00000617022 EHBP1Q8NDI1 1231 aa17.19■□□□□ 0.34
DDB2-212ENST00000617022 TAS1R2Q8TE23 839 aa17.19■□□□□ 0.34
DDB2-212ENST00000617022 CGRRF1Q99675 332 aa17.19■□□□□ 0.34
DDB2-212ENST00000617022 AJAP1Q9UKB5 411 aaPredicted RBP17.19■□□□□ 0.34
DDB2-212ENST00000617022 LRRC53A6NM62 1247 aa17.18■□□□□ 0.34
DDB2-212ENST00000617022 ARVCFO00192 962 aa17.18■□□□□ 0.34
DDB2-212ENST00000617022 GTF2H1P32780 548 aa17.18■□□□□ 0.34
DDB2-212ENST00000617022 SLC27A1Q6PCB7 646 aa17.18■□□□□ 0.34
DDB2-212ENST00000617022 OR5B17Q8NGF7 314 aa17.18■□□□□ 0.34
DDB2-212ENST00000617022 SEMA4DQ92854 862 aa17.18■□□□□ 0.34
DDB2-212ENST00000617022 ZNF333Q96JL9 665 aa17.18■□□□□ 0.34
DDB2-212ENST00000617022 OSBPL7Q9BZF2 842 aa17.18■□□□□ 0.34
DDB2-212ENST00000617022 RPF1Q9H9Y2 349 aaKnown RBP17.18■□□□□ 0.34
DDB2-212ENST00000617022 MEFVO15553 781 aaPredicted RBP17.18■□□□□ 0.34
DDB2-212ENST00000617022 USP8P40818 1118 aa17.18■□□□□ 0.34
DDB2-212ENST00000617022 AARSP49588 968 aaKnown RBP eCLIP17.18■□□□□ 0.34
DDB2-212ENST00000617022 TRIM71Q2Q1W2 868 aaKnown RBP17.18■□□□□ 0.34
DDB2-212ENST00000617022 ELMO3Q96BJ8 720 aa17.18■□□□□ 0.34
DDB2-212ENST00000617022 FAM204AQ9H8W3 233 aa17.18■□□□□ 0.34
DDB2-212ENST00000617022 SOWAHDA6NJG2 315 aa17.17■□□□□ 0.34
DDB2-212ENST00000617022 PMM2O15305 246 aa17.17■□□□□ 0.34
DDB2-212ENST00000617022 C4BPAP04003 597 aaKnown RBP17.17■□□□□ 0.34
DDB2-212ENST00000617022 RPLP2P05387 115 aaKnown RBP17.17■□□□□ 0.34
DDB2-212ENST00000617022 CLTAP09496 248 aa17.17■□□□□ 0.34
DDB2-212ENST00000617022 AXLP30530 894 aa17.17■□□□□ 0.34
DDB2-212ENST00000617022 NFX1Q12986 1120 aaKnown RBP17.17■□□□□ 0.34
DDB2-212ENST00000617022 DCAF4L1Q3SXM0 396 aa17.17■□□□□ 0.34
DDB2-212ENST00000617022 TDRD10Q5VZ19 366 aaKnown RBP17.17■□□□□ 0.34
DDB2-212ENST00000617022 IQCEQ6IPM2 695 aa17.17■□□□□ 0.34
DDB2-212ENST00000617022 PDXDC1Q6P996 788 aa17.17■□□□□ 0.34
DDB2-212ENST00000617022 WDR59Q6PJI9 974 aa17.17■□□□□ 0.34
DDB2-212ENST00000617022 C15orf39Q6ZRI6 1047 aa17.17■□□□□ 0.34
DDB2-212ENST00000617022 FBXL13Q8NEE6 735 aa17.17■□□□□ 0.34
DDB2-212ENST00000617022 EDEM3Q9BZQ6 932 aa17.17■□□□□ 0.34
DDB2-212ENST00000617022 HES2Q9Y543 173 aa17.17■□□□□ 0.34
DDB2-212ENST00000617022 BIRC3Q13489 604 aa17.16■□□□□ 0.34
DDB2-212ENST00000617022 RAPGEF1Q13905 1077 aa17.16■□□□□ 0.34
DDB2-212ENST00000617022 TSR1Q2NL82 804 aaKnown RBP17.16■□□□□ 0.34
DDB2-212ENST00000617022 ZACNQ401N2 412 aa17.16■□□□□ 0.34
DDB2-212ENST00000617022 ZNF618Q5T7W0 954 aa17.16■□□□□ 0.34
DDB2-212ENST00000617022 PHLDB3Q6NSJ2 640 aa17.16■□□□□ 0.34
DDB2-212ENST00000617022 MICALL1Q8N3F8 863 aa17.16■□□□□ 0.34
DDB2-212ENST00000617022 CHP1Q99653 195 aa17.16■□□□□ 0.34
DDB2-212ENST00000617022 RAB20Q9NX57 234 aa17.16■□□□□ 0.34
DDB2-212ENST00000617022 APEX2Q9UBZ4 518 aa17.16■□□□□ 0.34
DDB2-212ENST00000617022 ST3GAL5Q9UNP4 418 aa17.16■□□□□ 0.34
DDB2-212ENST00000617022 COQ4Q9Y3A0 265 aa17.16■□□□□ 0.34
DDB2-212ENST00000617022 CCDC175P0C221 793 aa17.16■□□□□ 0.34
DDB2-212ENST00000617022 CTCFP49711 727 aaPredicted RBP17.16■□□□□ 0.34
DDB2-212ENST00000617022 MTF1Q14872 753 aa17.16■□□□□ 0.34
DDB2-212ENST00000617022 WDR49Q8IV35 697 aa17.16■□□□□ 0.34
DDB2-212ENST00000617022 U2AF1L4Q8WU68 220 aaKnown RBP17.16■□□□□ 0.34
DDB2-212ENST00000617022 TRIM6Q9C030 488 aaPredicted RBP17.16■□□□□ 0.34
DDB2-212ENST00000617022 MTMR12Q9C0I1 747 aa17.16■□□□□ 0.34
DDB2-212ENST00000617022 AGO3Q9H9G7 860 aaKnown RBP17.16■□□□□ 0.34
DDB2-212ENST00000617022 SNTG2Q9NY99 539 aa17.16■□□□□ 0.34
DDB2-212ENST00000617022 LACTBL1A8MY62 500 aa17.15■□□□□ 0.34
DDB2-212ENST00000617022 GHRP10912 638 aa17.15■□□□□ 0.34
DDB2-212ENST00000617022 FECHP22830 423 aa17.15■□□□□ 0.34
DDB2-212ENST00000617022 GRM5P41594 1212 aa17.15■□□□□ 0.34
DDB2-212ENST00000617022 TFAMQ00059 246 aaKnown RBP17.15■□□□□ 0.34
DDB2-212ENST00000617022 SURF1Q15526 300 aa17.15■□□□□ 0.34
DDB2-212ENST00000617022 SLC10A6Q3KNW5 377 aa17.15■□□□□ 0.34
DDB2-212ENST00000617022 FBXO47Q5MNV8 452 aa17.15■□□□□ 0.34
DDB2-212ENST00000617022 SCARA3Q6AZY7 606 aa17.15■□□□□ 0.34
DDB2-212ENST00000617022 ARHGEF19Q8IW93 802 aa17.15■□□□□ 0.34
DDB2-212ENST00000617022 ACAP3Q96P50 834 aa17.15■□□□□ 0.34
DDB2-212ENST00000617022 PI4K2AQ9BTU6 479 aa17.15■□□□□ 0.34
DDB2-212ENST00000617022 NAA15Q9BXJ9 866 aaKnown RBP17.15■□□□□ 0.34
DDB2-212ENST00000617022 NXF3Q9H4D5 531 aaKnown RBP17.15■□□□□ 0.34
DDB2-212ENST00000617022 DNAJC12Q9UKB3 198 aa17.15■□□□□ 0.34
DDB2-212ENST00000617022 PLAGL2Q9UPG8 496 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms