RNA–Protein interactions for RNA: ENST00000616614.4

FMR1-216, Transcript of fragile X mental retardation 1, humanhuman

TSL 5

Gene FMR1, Length 1,409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-216ENST00000616614 TULP1O00294 542 aaPredicted RBP34.52■■■■□ 3.12
FMR1-216ENST00000616614 LRPAP1P30533 357 aa34.52■■■■□ 3.12
FMR1-216ENST00000616614 RPL9P32969 192 aaKnown RBP34.52■■■■□ 3.12
FMR1-216ENST00000616614 MCM4P33991 863 aa34.52■■■■□ 3.12
FMR1-216ENST00000616614 CASP4P49662 377 aa34.52■■■■□ 3.12
FMR1-216ENST00000616614 TMC7Q7Z402 723 aa34.52■■■■□ 3.12
FMR1-216ENST00000616614 B3GALT6Q96L58 329 aa34.52■■■■□ 3.12
FMR1-216ENST00000616614 NSUN3Q9H649 340 aaKnown RBP34.52■■■■□ 3.12
FMR1-216ENST00000616614 ENTPD7Q9NQZ7 604 aa34.52■■■■□ 3.12
FMR1-216ENST00000616614 CALUO43852 315 aaPredicted RBP34.51■■■■□ 3.12
FMR1-216ENST00000616614 EXOC3O60645 756 aa34.51■■■■□ 3.12
FMR1-216ENST00000616614 SOD2P04179 222 aa34.51■■■■□ 3.12
FMR1-216ENST00000616614 PMS1P54277 932 aaKnown RBP34.51■■■■□ 3.12
FMR1-216ENST00000616614 TIGD5Q53EQ6 642 aa34.51■■■■□ 3.12
FMR1-216ENST00000616614 SCARA3Q6AZY7 606 aa34.51■■■■□ 3.12
FMR1-216ENST00000616614 CENPPQ6IPU0 288 aa34.51■■■■□ 3.12
FMR1-216ENST00000616614 GZF1Q9H116 711 aaPredicted RBP34.51■■■■□ 3.12
FMR1-216ENST00000616614 NUP62CLQ9H1M0 184 aa34.51■■■■□ 3.12
FMR1-216ENST00000616614 PTPRJQ12913 1337 aa34.51■■■■□ 3.11
FMR1-216ENST00000616614 PPP1R3GB7ZBB8 358 aa34.5■■■■□ 3.11
FMR1-216ENST00000616614 PPEF2O14830 753 aa34.5■■■■□ 3.11
FMR1-216ENST00000616614 CTSAP10619 480 aa34.5■■■■□ 3.11
FMR1-216ENST00000616614 NFIL3Q16649 462 aa34.5■■■■□ 3.11
FMR1-216ENST00000616614 HERC2P3Q9BVR0 1158 aa34.5■■■■□ 3.11
FMR1-216ENST00000616614 NGRNQ9NPE2 291 aaKnown RBP34.5■■■■□ 3.11
FMR1-216ENST00000616614 CYP24A1Q07973 514 aa34.49■■■■□ 3.11
FMR1-216ENST00000616614 MYBPC2Q14324 1141 aa34.49■■■■□ 3.11
FMR1-216ENST00000616614 MRPL43Q8N983 215 aaKnown RBP34.49■■■■□ 3.11
FMR1-216ENST00000616614 BEST2Q8NFU1 509 aa34.49■■■■□ 3.11
FMR1-216ENST00000616614 PLEKHO2Q8TD55 490 aa34.49■■■■□ 3.11
FMR1-216ENST00000616614 MFSD14AQ96MC6 490 aa34.49■■■■□ 3.11
FMR1-216ENST00000616614 GTPBP4Q9BZE4 634 aaKnown RBP34.49■■■■□ 3.11
FMR1-216ENST00000616614 ATG2AQ2TAZ0 1938 aa34.49■■■■□ 3.11
FMR1-216ENST00000616614 I3L4J1 428 aa34.48■■■■□ 3.11
FMR1-216ENST00000616614 CXCL14O95715 111 aa34.48■■■■□ 3.11
FMR1-216ENST00000616614 GTF2F1P35269 517 aaKnown RBP eCLIP34.48■■■■□ 3.11
FMR1-216ENST00000616614 BRCC3P46736 316 aa34.48■■■■□ 3.11
FMR1-216ENST00000616614 LMBRD2Q68DH5 695 aaPredicted RBP34.48■■■■□ 3.11
FMR1-216ENST00000616614 PDE12Q6L8Q7 609 aaKnown RBP34.48■■■■□ 3.11
FMR1-216ENST00000616614 CHST7Q9NS84 486 aa34.48■■■■□ 3.11
FMR1-216ENST00000616614 C2orf71A6NGG8 1288 aa34.47■■■■□ 3.11
FMR1-216ENST00000616614 XPOTO43592 962 aaKnown RBP34.47■■■■□ 3.11
FMR1-216ENST00000616614 LILRB3O75022 631 aa34.47■■■■□ 3.11
FMR1-216ENST00000616614 TFAMQ00059 246 aaKnown RBP34.47■■■■□ 3.11
FMR1-216ENST00000616614 HYAL1Q12794 435 aa34.47■■■■□ 3.11
FMR1-216ENST00000616614 PSMD6Q15008 389 aa34.47■■■■□ 3.11
FMR1-216ENST00000616614 ANKRD40Q6AI12 368 aa34.47■■■■□ 3.11
FMR1-216ENST00000616614 POP1Q99575 1024 aaKnown RBP34.47■■■■□ 3.11
FMR1-216ENST00000616614 DPP3Q9NY33 737 aa34.47■■■■□ 3.11
FMR1-216ENST00000616614 ANK1P16157 1881 aa34.47■■■■□ 3.11
FMR1-216ENST00000616614 PDCD11Q14690 1871 aaKnown RBP34.47■■■■□ 3.11
FMR1-216ENST00000616614 MYO7AQ13402 2215 aa34.47■■■■□ 3.11
FMR1-216ENST00000616614 PRUNE2Q8WUY3 3088 aa34.47■■■■□ 3.11
FMR1-216ENST00000616614 TRIM49BA6NDI0 452 aa34.47■■■■□ 3.11
FMR1-216ENST00000616614 PER2O15055 1255 aa34.47■■■■□ 3.11
FMR1-216ENST00000616614 NR2F2P24468 414 aa34.47■■■■□ 3.11
FMR1-216ENST00000616614 SMC1AQ14683 1233 aaKnown RBP34.47■■■■□ 3.11
FMR1-216ENST00000616614 PTPN14Q15678 1187 aa34.47■■■■□ 3.11
FMR1-216ENST00000616614 KIAA0319Q5VV43 1072 aa34.47■■■■□ 3.11
FMR1-216ENST00000616614 RBM23Q86U06 439 aaKnown RBP34.47■■■■□ 3.11
FMR1-216ENST00000616614 NT5DC4Q86YG4 428 aa34.47■■■■□ 3.11
FMR1-216ENST00000616614 TRIML1Q8N9V2 468 aa34.47■■■■□ 3.11
FMR1-216ENST00000616614 OR5B17Q8NGF7 314 aa34.47■■■■□ 3.11
FMR1-216ENST00000616614 CCDC127Q96BQ5 260 aa34.47■■■■□ 3.11
FMR1-216ENST00000616614 EEF2KMTQ96G04 330 aa34.47■■■■□ 3.11
FMR1-216ENST00000616614 SF3B1O75533 1304 aaKnown RBP eCLIP34.46■■■■□ 3.115e-10■■■■■ 55.1
FMR1-216ENST00000616614 ANO9A1A5B4 782 aa34.46■■■■□ 3.11
FMR1-216ENST00000616614 PIRO00625 290 aa34.46■■■■□ 3.11
FMR1-216ENST00000616614 FAM171A1Q5VUB5 890 aa34.46■■■■□ 3.11
FMR1-216ENST00000616614 C9orf57Q5W0N0 161 aa34.46■■■■□ 3.11
FMR1-216ENST00000616614 CEP135Q66GS9 1140 aa34.46■■■■□ 3.11
FMR1-216ENST00000616614 STK39Q9UEW8 545 aa34.46■■■■□ 3.11
FMR1-216ENST00000616614 AKAP3O75969 853 aa34.45■■■■□ 3.11
FMR1-216ENST00000616614 ADAM9Q13443 819 aa34.45■■■■□ 3.11
FMR1-216ENST00000616614 EDRF1Q3B7T1 1238 aa34.45■■■■□ 3.11
FMR1-216ENST00000616614 RTP2Q5QGT7 225 aa34.45■■■■□ 3.11
FMR1-216ENST00000616614 C1orf127Q8N9H9 656 aa34.45■■■■□ 3.11
FMR1-216ENST00000616614 CXorf38Q8TB03 319 aa34.45■■■■□ 3.11
FMR1-216ENST00000616614 DHTKD1Q96HY7 919 aaPredicted RBP34.45■■■■□ 3.11
FMR1-216ENST00000616614 INTS13Q9NVM9 706 aa34.45■■■■□ 3.11
FMR1-216ENST00000616614 GTF3C5Q9Y5Q8 519 aaPredicted RBP34.45■■■■□ 3.11
FMR1-216ENST00000616614 IRAK3Q9Y616 596 aa34.45■■■■□ 3.11
FMR1-216ENST00000616614 C2CD2LO14523 706 aa34.44■■■■□ 3.1
FMR1-216ENST00000616614 NRIP1P48552 1158 aa34.44■■■■□ 3.1
FMR1-216ENST00000616614 DSG1Q02413 1049 aa34.44■■■■□ 3.1
FMR1-216ENST00000616614 USP41Q3LFD5 358 aa34.44■■■■□ 3.1
FMR1-216ENST00000616614 MTMR12Q9C0I1 747 aa34.44■■■■□ 3.1
FMR1-216ENST00000616614 PRDM6Q9NQX0 595 aa34.44■■■■□ 3.1
FMR1-216ENST00000616614 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP34.43■■■■□ 3.1
FMR1-216ENST00000616614 SPTLC1O15269 473 aa34.43■■■■□ 3.1
FMR1-216ENST00000616614 DLATP10515 647 aaKnown RBP34.43■■■■□ 3.1
FMR1-216ENST00000616614 CCNE1P24864 410 aa34.43■■■■□ 3.1
FMR1-216ENST00000616614 GLUD2P49448 558 aa34.43■■■■□ 3.1
FMR1-216ENST00000616614 SURF1Q15526 300 aa34.43■■■■□ 3.1
FMR1-216ENST00000616614 KLHL10Q6JEL2 608 aa34.43■■■■□ 3.1
FMR1-216ENST00000616614 ZNF516Q92618 1163 aa34.43■■■■□ 3.1
FMR1-216ENST00000616614 IGFLR1Q9H665 355 aa34.43■■■■□ 3.1
FMR1-216ENST00000616614 TLE6Q9H808 572 aa34.43■■■■□ 3.1
FMR1-216ENST00000616614 NUB1Q9Y5A7 615 aa34.43■■■■□ 3.1
FMR1-216ENST00000616614 PSMA7O14818 248 aa34.42■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms