RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 PI4K2AQ9BTU6 479 aa14.23□□□□□ -0.13
PCDHA11-202ENST00000616325 NUP85Q9BW27 656 aa14.23□□□□□ -0.13
PCDHA11-202ENST00000616325 ROPN1BQ9BZX4 212 aaPredicted RBP14.23□□□□□ -0.13
PCDHA11-202ENST00000616325 DNAJC18Q9H819 358 aa14.23□□□□□ -0.13
PCDHA11-202ENST00000616325 ROPN1Q9HAT0 212 aaPredicted RBP14.23□□□□□ -0.13
PCDHA11-202ENST00000616325 PREBQ9HCU5 417 aa14.23□□□□□ -0.13
PCDHA11-202ENST00000616325 MYO3BQ8WXR4 1341 aa14.23□□□□□ -0.13
PCDHA11-202ENST00000616325 SYNGAP1Q96PV0 1343 aa14.23□□□□□ -0.13
PCDHA11-202ENST00000616325 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.23□□□□□ -0.13
PCDHA11-202ENST00000616325 EXOC1LA0A1B0GW35 172 aa14.23□□□□□ -0.13
PCDHA11-202ENST00000616325 CLRN2A0PK11 232 aa14.23□□□□□ -0.13
PCDHA11-202ENST00000616325 TXNDC9O14530 226 aa14.23□□□□□ -0.13
PCDHA11-202ENST00000616325 DCTN3O75935 186 aa14.23□□□□□ -0.13
PCDHA11-202ENST00000616325 ZBTB48P10074 688 aaPredicted RBP14.23□□□□□ -0.13
PCDHA11-202ENST00000616325 BCRP11274 1271 aa14.23□□□□□ -0.13
PCDHA11-202ENST00000616325 ACADSP16219 412 aa14.23□□□□□ -0.13
PCDHA11-202ENST00000616325 CETN2P41208 172 aa14.23□□□□□ -0.13
PCDHA11-202ENST00000616325 LBRQ14739 615 aaKnown RBP14.23□□□□□ -0.13
PCDHA11-202ENST00000616325 PPP1R21Q6ZMI0 780 aa14.23□□□□□ -0.13
PCDHA11-202ENST00000616325 CCDC125Q86Z20 511 aa14.23□□□□□ -0.13
PCDHA11-202ENST00000616325 PASD1Q8IV76 773 aa14.23□□□□□ -0.13
PCDHA11-202ENST00000616325 SLC7A6OSQ96CW6 309 aaPredicted RBP14.23□□□□□ -0.13
PCDHA11-202ENST00000616325 ZNF577Q9BSK1 485 aa14.23□□□□□ -0.13
PCDHA11-202ENST00000616325 VPS37BQ9H9H4 285 aa14.23□□□□□ -0.13
PCDHA11-202ENST00000616325 WRAP73Q9P2S5 460 aaPredicted RBP14.23□□□□□ -0.13
PCDHA11-202ENST00000616325 TTC7AQ9ULT0 858 aaPredicted RBP14.23□□□□□ -0.13
PCDHA11-202ENST00000616325 WASF2Q9Y6W5 498 aa14.23□□□□□ -0.13
PCDHA11-202ENST00000616325 FAM47DPA6NHR8 397 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 ATP5HO75947 161 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 TTC4O95801 387 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 TMEM253P0C7T8 217 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 CHRNB2P17787 502 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 PIK3CAP42336 1068 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 GABPAQ06546 454 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 SPIRE1Q08AE8 756 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 CETN1Q12798 172 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 ABCB5Q2M3G0 1257 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 OLFML2BQ68BL8 750 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 OR52E8Q6IFG1 317 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 LRRC74BQ6ZQY2 392 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 NLRP9Q7RTR0 991 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 CFAP61Q8NHU2 1237 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 NMD3Q96D46 503 aaKnown RBP14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 GALNT8Q9NY28 637 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 ATF5Q9Y2D1 282 aaPredicted RBP14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 C2orf71A6NGG8 1288 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 TCP10L2B9ZVM9 353 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 ZBED4O75132 1171 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 SNHG28P0DPA3 235 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 NEK3P51956 506 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 MARSP56192 900 aaKnown RBP14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 SYDE2Q5VT97 1194 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 TRMT10CQ7L0Y3 403 aaKnown RBP14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 HAUS1Q96CS2 278 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 LXNQ9BS40 222 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 TOPORSQ9NS56 1045 aaPredicted RBP14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 ASB3Q9Y575 518 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 TBX10O75333 385 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 SLITRK3O94933 977 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 EYA4O95677 639 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 T-ENOLP0DO92 83 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 ARP10275 920 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 ATF2P15336 505 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 SMARCA1P28370 1054 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 PRKCIP41743 596 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 CCNG1P51959 295 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 JAM2P57087 298 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 BFSP1Q12934 665 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 DYNC1I2Q13409 638 aaKnown RBP14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 SNRNP27Q8WVK2 155 aaKnown RBP14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 OPTNQ96CV9 577 aa14.22□□□□□ -0.13
PCDHA11-202ENST00000616325 PPEF1O14829 653 aaPredicted RBP14.21□□□□□ -0.13
PCDHA11-202ENST00000616325 CRKP46108 304 aa14.21□□□□□ -0.13
PCDHA11-202ENST00000616325 SOX10P56693 466 aa14.21□□□□□ -0.13
PCDHA11-202ENST00000616325 PPP3CAQ08209 521 aa14.21□□□□□ -0.13
PCDHA11-202ENST00000616325 PARP6Q2NL67 630 aa14.21□□□□□ -0.13
PCDHA11-202ENST00000616325 ACSBG2Q5FVE4 666 aa14.21□□□□□ -0.13
PCDHA11-202ENST00000616325 ZNF365Q70YC5 407 aa14.21□□□□□ -0.13
PCDHA11-202ENST00000616325 SLC25A41Q8N5S1 370 aa14.21□□□□□ -0.13
PCDHA11-202ENST00000616325 ZNF564Q8TBZ8 553 aaPredicted RBP14.21□□□□□ -0.13
PCDHA11-202ENST00000616325 NRG4Q8WWG1 115 aa14.21□□□□□ -0.13
PCDHA11-202ENST00000616325 ART4Q93070 314 aa14.21□□□□□ -0.13
PCDHA11-202ENST00000616325 FAM161BQ96MY7 647 aa14.21□□□□□ -0.13
PCDHA11-202ENST00000616325 WDR18Q9BV38 432 aa14.21□□□□□ -0.13
PCDHA11-202ENST00000616325 CHST7Q9NS84 486 aa14.21□□□□□ -0.13
PCDHA11-202ENST00000616325 FBXO28Q9NVF7 368 aa14.21□□□□□ -0.13
PCDHA11-202ENST00000616325 IRS2Q9Y4H2 1338 aa14.21□□□□□ -0.13
PCDHA11-202ENST00000616325 SLC16A4O15374 487 aa14.21□□□□□ -0.13
PCDHA11-202ENST00000616325 TJP3O95049 919 aa14.21□□□□□ -0.13
PCDHA11-202ENST00000616325 BMP3P12645 472 aa14.21□□□□□ -0.13
PCDHA11-202ENST00000616325 IL1R1P14778 569 aa14.21□□□□□ -0.13
PCDHA11-202ENST00000616325 TPP2P29144 1249 aaPredicted RBP14.21□□□□□ -0.13
PCDHA11-202ENST00000616325 SPARCL1Q14515 664 aa14.21□□□□□ -0.13
PCDHA11-202ENST00000616325 ARHGAP27Q6ZUM4 889 aa14.21□□□□□ -0.13
PCDHA11-202ENST00000616325 SLC13A5Q86YT5 568 aaPredicted RBP14.21□□□□□ -0.13
PCDHA11-202ENST00000616325 LENG9Q96B70 501 aa14.21□□□□□ -0.13
PCDHA11-202ENST00000616325 VCX3BQ9H321 246 aa14.21□□□□□ -0.13
PCDHA11-202ENST00000616325 VCX3AQ9NNX9 186 aa14.21□□□□□ -0.13
PCDHA11-202ENST00000616325 CHMP2BQ9UQN3 213 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms