RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 FAM110CQ1W6H9 321 aa20.51■□□□□ 0.87
MMP28-204ENST00000615136 ZNF467Q7Z7K2 595 aaPredicted RBP20.51■□□□□ 0.87
MMP28-204ENST00000615136 BRSK2Q8IWQ3 736 aa20.51■□□□□ 0.87
MMP28-204ENST00000615136 CEP120Q8N960 986 aa20.51■□□□□ 0.87
MMP28-204ENST00000615136 FAM76AQ8TAV0 307 aa20.51■□□□□ 0.87
MMP28-204ENST00000615136 WHAMMQ8TF30 809 aa20.51■□□□□ 0.87
MMP28-204ENST00000615136 INO80BQ9C086 356 aaPredicted RBP20.51■□□□□ 0.87
MMP28-204ENST00000615136 GOLGA6AQ9NYA3 693 aa20.51■□□□□ 0.87
MMP28-204ENST00000615136 DOCK3Q8IZD9 2030 aa20.51■□□□□ 0.87
MMP28-204ENST00000615136 MGAMO43451 1857 aa20.51■□□□□ 0.87
MMP28-204ENST00000615136 CCDC188H7C350 402 aa20.51■□□□□ 0.87
MMP28-204ENST00000615136 ZC3H11AO75152 810 aaKnown RBP eCLIP20.51■□□□□ 0.87
MMP28-204ENST00000615136 CDR2Q01850 454 aa20.51■□□□□ 0.87
MMP28-204ENST00000615136 MBTD1Q05BQ5 628 aa20.51■□□□□ 0.87
MMP28-204ENST00000615136 PPFIA1Q13136 1202 aa20.51■□□□□ 0.87
MMP28-204ENST00000615136 PLEKHH3Q7Z736 793 aa20.51■□□□□ 0.87
MMP28-204ENST00000615136 FZD8Q9H461 694 aa20.51■□□□□ 0.87
MMP28-204ENST00000615136 PTPRHQ9HD43 1115 aa20.51■□□□□ 0.87
MMP28-204ENST00000615136 SHOX2O60902 331 aaPredicted RBP20.5■□□□□ 0.87
MMP28-204ENST00000615136 RTN2O75298 545 aa20.5■□□□□ 0.87
MMP28-204ENST00000615136 CST3P01034 146 aaPredicted RBP20.5■□□□□ 0.87
MMP28-204ENST00000615136 FAM153BP0C7A2 387 aa20.5■□□□□ 0.87
MMP28-204ENST00000615136 PROZP22891 400 aa20.5■□□□□ 0.87
MMP28-204ENST00000615136 OSTNP61366 133 aa20.5■□□□□ 0.87
MMP28-204ENST00000615136 MCL1Q07820 350 aa20.5■□□□□ 0.87
MMP28-204ENST00000615136 FAM153CQ494X1 144 aa20.5■□□□□ 0.87
MMP28-204ENST00000615136 KLHL7Q8IXQ5 586 aa20.5■□□□□ 0.87
MMP28-204ENST00000615136 TMEM130Q8N3G9 435 aa20.5■□□□□ 0.87
MMP28-204ENST00000615136 FAM212AQ96EL1 285 aa20.5■□□□□ 0.87
MMP28-204ENST00000615136 TINF2Q9BSI4 451 aa20.5■□□□□ 0.87
MMP28-204ENST00000615136 IFT122Q9HBG6 1241 aa20.5■□□□□ 0.87
MMP28-204ENST00000615136 FAM153AQ9UHL3 310 aa20.5■□□□□ 0.87
MMP28-204ENST00000615136 TTC7AQ9ULT0 858 aaPredicted RBP20.5■□□□□ 0.87
MMP28-204ENST00000615136 NUB1Q9Y5A7 615 aa20.5■□□□□ 0.87
MMP28-204ENST00000615136 IGF2BP3O00425 579 aaKnown RBP eCLIP20.49■□□□□ 0.87
MMP28-204ENST00000615136 ACO1P21399 889 aaKnown RBP20.49■□□□□ 0.87
MMP28-204ENST00000615136 PDE6CP51160 858 aa20.49■□□□□ 0.87
MMP28-204ENST00000615136 HUNKP57058 714 aa20.49■□□□□ 0.87
MMP28-204ENST00000615136 PTENP60484 403 aa20.49■□□□□ 0.87
MMP28-204ENST00000615136 TMEM192Q8IY95 271 aa20.49■□□□□ 0.87
MMP28-204ENST00000615136 EXOC8Q8IYI6 725 aa20.49■□□□□ 0.87
MMP28-204ENST00000615136 LINC01465Q8N7H1 131 aa20.49■□□□□ 0.87
MMP28-204ENST00000615136 PPP1R13LQ8WUF5 828 aa20.49■□□□□ 0.87
MMP28-204ENST00000615136 IFT81Q8WYA0 676 aa20.49■□□□□ 0.87
MMP28-204ENST00000615136 EMID1Q96A84 441 aaPredicted RBP20.49■□□□□ 0.87
MMP28-204ENST00000615136 ZIM3Q96PE6 472 aa20.49■□□□□ 0.87
MMP28-204ENST00000615136 CWC15Q9P013 229 aaKnown RBP20.49■□□□□ 0.87
MMP28-204ENST00000615136 CPSF3Q9UKF6 684 aaKnown RBP20.49■□□□□ 0.87
MMP28-204ENST00000615136 AMFRQ9UKV5 643 aa20.49■□□□□ 0.87
MMP28-204ENST00000615136 ACKR2O00590 384 aa20.49■□□□□ 0.87
MMP28-204ENST00000615136 OGTO15294 1046 aa20.49■□□□□ 0.87
MMP28-204ENST00000615136 ITGBL1O95965 494 aaPredicted RBP20.49■□□□□ 0.87
MMP28-204ENST00000615136 IVLP07476 585 aa20.49■□□□□ 0.87
MMP28-204ENST00000615136 WDR44Q5JSH3 913 aa20.49■□□□□ 0.87
MMP28-204ENST00000615136 PRAMEF19Q5SWL8 479 aa20.49■□□□□ 0.87
MMP28-204ENST00000615136 TSHZ1Q6ZSZ6 1077 aa20.49■□□□□ 0.87
MMP28-204ENST00000615136 THNSL1Q8IYQ7 743 aa20.49■□□□□ 0.87
MMP28-204ENST00000615136 IQCKQ8N0W5 287 aa20.49■□□□□ 0.87
MMP28-204ENST00000615136 RUFY1Q96T51 708 aa20.49■□□□□ 0.87
MMP28-204ENST00000615136 JPH2Q9BR39 696 aaPredicted RBP20.49■□□□□ 0.87
MMP28-204ENST00000615136 MTMR12Q9C0I1 747 aa20.49■□□□□ 0.87
MMP28-204ENST00000615136 C2orf40Q9H1Z8 148 aa20.49■□□□□ 0.87
MMP28-204ENST00000615136 PLEKHA4Q9H4M7 779 aa20.49■□□□□ 0.87
MMP28-204ENST00000615136 VTNP04004 478 aa20.48■□□□□ 0.87
MMP28-204ENST00000615136 CFHP08603 1231 aa20.48■□□□□ 0.87
MMP28-204ENST00000615136 GZMAP12544 262 aa20.48■□□□□ 0.87
MMP28-204ENST00000615136 HADHBP55084 474 aaKnown RBP20.48■□□□□ 0.87
MMP28-204ENST00000615136 CUL1Q13616 776 aa20.48■□□□□ 0.87
MMP28-204ENST00000615136 ACVR2BQ13705 512 aa20.48■□□□□ 0.87
MMP28-204ENST00000615136 ZNF484Q5JVG2 852 aa20.48■□□□□ 0.87
MMP28-204ENST00000615136 ATF7IP2Q5U623 682 aa20.48■□□□□ 0.87
MMP28-204ENST00000615136 CPNE8Q86YQ8 564 aa20.48■□□□□ 0.87
MMP28-204ENST00000615136 CTTNBP2NLQ9P2B4 639 aa20.48■□□□□ 0.87
MMP28-204ENST00000615136 A0A087WZ62 844 aa20.48■□□□□ 0.87
MMP28-204ENST00000615136 DDX3YO15523 660 aaKnown RBP20.48■□□□□ 0.87
MMP28-204ENST00000615136 SART1O43290 800 aaKnown RBP20.48■□□□□ 0.87
MMP28-204ENST00000615136 ECHS1P30084 290 aa20.48■□□□□ 0.87
MMP28-204ENST00000615136 GPC5P78333 572 aa20.48■□□□□ 0.87
MMP28-204ENST00000615136 IRX5P78411 483 aaPredicted RBP20.48■□□□□ 0.87
MMP28-204ENST00000615136 CUL2Q13617 745 aa20.48■□□□□ 0.87
MMP28-204ENST00000615136 NCOA4Q13772 614 aa20.48■□□□□ 0.87
MMP28-204ENST00000615136 TFDP1Q14186 410 aa20.48■□□□□ 0.87
MMP28-204ENST00000615136 KCTD19Q17RG1 926 aaPredicted RBP20.48■□□□□ 0.87
MMP28-204ENST00000615136 DCAF12L1Q5VU92 463 aa20.48■□□□□ 0.87
MMP28-204ENST00000615136 MPZL3Q6UWV2 235 aa20.48■□□□□ 0.87
MMP28-204ENST00000615136 ENOSF1Q7L5Y1 443 aa20.48■□□□□ 0.87
MMP28-204ENST00000615136 FDXACB1Q9BRP7 624 aaPredicted RBP20.48■□□□□ 0.87
MMP28-204ENST00000615136 SLITRK6Q9H5Y7 841 aa20.48■□□□□ 0.87
MMP28-204ENST00000615136 ANK1P16157 1881 aa20.47■□□□□ 0.87
MMP28-204ENST00000615136 H3BRB1 525 aa20.47■□□□□ 0.87
MMP28-204ENST00000615136 SSTR3P32745 418 aaPredicted RBP20.47■□□□□ 0.87
MMP28-204ENST00000615136 NOP14P78316 857 aaKnown RBP20.47■□□□□ 0.87
MMP28-204ENST00000615136 TCEAL1Q15170 157 aa20.47■□□□□ 0.87
MMP28-204ENST00000615136 ZNF568Q3ZCX4 644 aa20.47■□□□□ 0.87
MMP28-204ENST00000615136 DUSP28Q4G0W2 176 aa20.47■□□□□ 0.87
MMP28-204ENST00000615136 LRRC31Q6UY01 552 aa20.47■□□□□ 0.87
MMP28-204ENST00000615136 AP1M1Q9BXS5 423 aa20.47■□□□□ 0.87
MMP28-204ENST00000615136 TUT1Q9H6E5 874 aaKnown RBP20.47■□□□□ 0.87
MMP28-204ENST00000615136 KRIT1O00522 736 aa20.46■□□□□ 0.87
MMP28-204ENST00000615136 MEFVO15553 781 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms