RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 FAM213AQ9BRX8 229 aa18.19■□□□□ 0.5
CBWD3-211ENST00000615061 TMEM206Q9H813 350 aa18.19■□□□□ 0.5
CBWD3-211ENST00000615061 GOLGA8IPA6NC78 632 aa18.19■□□□□ 0.5
CBWD3-211ENST00000615061 GOLGA6L4A6NEF3 574 aa18.19■□□□□ 0.5
CBWD3-211ENST00000615061 GOLGA8JA6NMD2 632 aa18.19■□□□□ 0.5
CBWD3-211ENST00000615061 TEX28O15482 410 aa18.19■□□□□ 0.5
CBWD3-211ENST00000615061 ADRB2P07550 413 aa18.19■□□□□ 0.5
CBWD3-211ENST00000615061 NFICP08651 508 aa18.19■□□□□ 0.5
CBWD3-211ENST00000615061 RPL17P18621 184 aaKnown RBP18.19■□□□□ 0.5
CBWD3-211ENST00000615061 STK4Q13043 487 aa18.19■□□□□ 0.5
CBWD3-211ENST00000615061 POSTNQ15063 836 aa18.19■□□□□ 0.5
CBWD3-211ENST00000615061 KMT5BQ4FZB7 885 aa18.19■□□□□ 0.5
CBWD3-211ENST00000615061 JADE1Q6IE81 842 aa18.19■□□□□ 0.5
CBWD3-211ENST00000615061 PRSS55Q6UWB4 352 aaPredicted RBP18.19■□□□□ 0.5
CBWD3-211ENST00000615061 GLYCTKQ8IVS8 523 aa18.19■□□□□ 0.5
CBWD3-211ENST00000615061 APOL5Q9BWW9 433 aa18.19■□□□□ 0.5
CBWD3-211ENST00000615061 TMEM189-UBE2V1I3L0A0 370 aa18.18■□□□□ 0.5
CBWD3-211ENST00000615061 EIF3DO15371 548 aaKnown RBP eCLIP18.18■□□□□ 0.5
CBWD3-211ENST00000615061 TGFB1I1O43294 461 aa18.18■□□□□ 0.5
CBWD3-211ENST00000615061 STXBP4Q6ZWJ1 553 aa18.18■□□□□ 0.5
CBWD3-211ENST00000615061 FMR1NBQ8N0W7 255 aaPredicted RBP18.18■□□□□ 0.5
CBWD3-211ENST00000615061 KIAA0895Q8NCT3 520 aa18.18■□□□□ 0.5
CBWD3-211ENST00000615061 ADAMTS19Q8TE59 1207 aa18.18■□□□□ 0.5
CBWD3-211ENST00000615061 NOC3LQ8WTT2 800 aaKnown RBP18.18■□□□□ 0.5
CBWD3-211ENST00000615061 CD207Q9UJ71 328 aa18.18■□□□□ 0.5
CBWD3-211ENST00000615061 CDH22Q9UJ99 828 aa18.18■□□□□ 0.5
CBWD3-211ENST00000615061 GRXCR2A6NFK2 248 aa18.17■□□□□ 0.5
CBWD3-211ENST00000615061 TULP1O00294 542 aaPredicted RBP18.17■□□□□ 0.5
CBWD3-211ENST00000615061 GARTP22102 1010 aa18.17■□□□□ 0.5
CBWD3-211ENST00000615061 KLRC2P26717 231 aa18.17■□□□□ 0.5
CBWD3-211ENST00000615061 SNW1Q13573 536 aaKnown RBP18.17■□□□□ 0.5
CBWD3-211ENST00000615061 ARMCX5Q6P1M9 558 aa18.17■□□□□ 0.5
CBWD3-211ENST00000615061 SYCE2Q6PIF2 218 aa18.17■□□□□ 0.5
CBWD3-211ENST00000615061 TMEM184AQ6ZMB5 413 aa18.17■□□□□ 0.5
CBWD3-211ENST00000615061 SMRP1Q8NCR6 262 aa18.17■□□□□ 0.5
CBWD3-211ENST00000615061 FEZF2Q8TBJ5 459 aa18.17■□□□□ 0.5
CBWD3-211ENST00000615061 DDX27Q96GQ7 796 aaKnown RBP18.17■□□□□ 0.5
CBWD3-211ENST00000615061 FAM84AQ96KN4 292 aa18.17■□□□□ 0.5
CBWD3-211ENST00000615061 TTPALQ9BTX7 342 aa18.17■□□□□ 0.5
CBWD3-211ENST00000615061 EMILIN2Q9BXX0 1053 aa18.17■□□□□ 0.5
CBWD3-211ENST00000615061 EXOC1Q9NV70 894 aa18.17■□□□□ 0.5
CBWD3-211ENST00000615061 CHMP5Q9NZZ3 219 aa18.17■□□□□ 0.5
CBWD3-211ENST00000615061 UBQLN1Q9UMX0 589 aaKnown RBP18.17■□□□□ 0.5
CBWD3-211ENST00000615061 MTCL1Q9Y4B5 1905 aaKnown RBP18.17■□□□□ 0.5
CBWD3-211ENST00000615061 PPEF2O14830 753 aa18.17■□□□□ 0.5
CBWD3-211ENST00000615061 MBTPS2O43462 519 aa18.17■□□□□ 0.5
CBWD3-211ENST00000615061 RPN1P04843 607 aaKnown RBP18.17■□□□□ 0.5
CBWD3-211ENST00000615061 CLCN4P51793 760 aa18.17■□□□□ 0.5
CBWD3-211ENST00000615061 DPYDQ12882 1025 aa18.17■□□□□ 0.5
CBWD3-211ENST00000615061 ANKRD54Q6NXT1 300 aa18.17■□□□□ 0.5
CBWD3-211ENST00000615061 KANK3Q6NY19 840 aa18.17■□□□□ 0.5
CBWD3-211ENST00000615061 ENGASEQ8NFI3 743 aa18.17■□□□□ 0.5
CBWD3-211ENST00000615061 SLC22A17Q8WUG5 538 aa18.17■□□□□ 0.5
CBWD3-211ENST00000615061 RXFP1Q9HBX9 757 aa18.17■□□□□ 0.5
CBWD3-211ENST00000615061 CLIC2O15247 247 aa18.16■□□□□ 0.5
CBWD3-211ENST00000615061 GADD45BO75293 160 aaPredicted RBP18.16■□□□□ 0.5
CBWD3-211ENST00000615061 TKTP29401 623 aaKnown RBP18.16■□□□□ 0.5
CBWD3-211ENST00000615061 RPL9P32969 192 aaKnown RBP18.16■□□□□ 0.5
CBWD3-211ENST00000615061 EFCAB13Q8IY85 973 aa18.16■□□□□ 0.5
CBWD3-211ENST00000615061 LNX1Q8TBB1 728 aaPredicted RBP18.16■□□□□ 0.5
CBWD3-211ENST00000615061 AGPAT3Q9NRZ7 376 aa18.16■□□□□ 0.5
CBWD3-211ENST00000615061 DOCK6Q96HP0 2047 aa18.16■□□□□ 0.5
CBWD3-211ENST00000615061 FSD2A1L4K1 749 aa18.15■□□□□ 0.5
CBWD3-211ENST00000615061 MYL1P05976 194 aa18.15■□□□□ 0.5
CBWD3-211ENST00000615061 LRPAP1P30533 357 aa18.15■□□□□ 0.5
CBWD3-211ENST00000615061 ELAVL2Q12926 359 aaKnown RBP18.15■□□□□ 0.5
CBWD3-211ENST00000615061 TMEM132DQ14C87 1099 aa18.15■□□□□ 0.5
CBWD3-211ENST00000615061 BMT2Q1RMZ1 405 aa18.15■□□□□ 0.5
CBWD3-211ENST00000615061 CD302Q8IX05 232 aa18.15■□□□□ 0.5
CBWD3-211ENST00000615061 C12orf76Q8N812 135 aaPredicted RBP18.15■□□□□ 0.5
CBWD3-211ENST00000615061 CASP10Q92851 521 aa18.15■□□□□ 0.5
CBWD3-211ENST00000615061 UHRF1Q96T88 793 aaPredicted RBP18.15■□□□□ 0.5
CBWD3-211ENST00000615061 ASB7Q9H672 318 aa18.15■□□□□ 0.5
CBWD3-211ENST00000615061 HSPBP1Q9NZL4 362 aa18.15■□□□□ 0.5
CBWD3-211ENST00000615061 SSX2IPQ9Y2D8 614 aa18.15■□□□□ 0.5
CBWD3-211ENST00000615061 NUB1Q9Y5A7 615 aa18.15■□□□□ 0.5
CBWD3-211ENST00000615061 DLL1O00548 723 aa18.14■□□□□ 0.5
CBWD3-211ENST00000615061 ADAM12O43184 909 aa18.14■□□□□ 0.5
CBWD3-211ENST00000615061 EXTL3O43909 919 aa18.14■□□□□ 0.5
CBWD3-211ENST00000615061 SPATA31D3P0C874 917 aa18.14■□□□□ 0.5
CBWD3-211ENST00000615061 CYP3A5P20815 502 aa18.14■□□□□ 0.5
CBWD3-211ENST00000615061 FGFR3P22607 806 aa18.14■□□□□ 0.5
CBWD3-211ENST00000615061 SMAD4Q13485 552 aaKnown RBP18.14■□□□□ 0.5
CBWD3-211ENST00000615061 PNOCQ13519 176 aa18.14■□□□□ 0.5
CBWD3-211ENST00000615061 PSMD5Q16401 504 aa18.14■□□□□ 0.5
CBWD3-211ENST00000615061 SPATA1Q5VX52 437 aa18.14■□□□□ 0.5
CBWD3-211ENST00000615061 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.14■□□□□ 0.5
CBWD3-211ENST00000615061 SPATA31D4Q6ZUB0 917 aa18.14■□□□□ 0.5
CBWD3-211ENST00000615061 PALB2Q86YC2 1186 aa18.14■□□□□ 0.5
CBWD3-211ENST00000615061 CBWD2Q8IUF1 395 aa18.14■□□□□ 0.5
CBWD3-211ENST00000615061 BRSK2Q8IWQ3 736 aa18.14■□□□□ 0.5
CBWD3-211ENST00000615061 GPD1LQ8N335 351 aa18.14■□□□□ 0.5
CBWD3-211ENST00000615061 PIK3R5Q8WYR1 880 aa18.14■□□□□ 0.5
CBWD3-211ENST00000615061 ERCC4Q92889 916 aaPredicted RBP18.14■□□□□ 0.5
CBWD3-211ENST00000615061 S1PR5Q9H228 398 aa18.14■□□□□ 0.5
CBWD3-211ENST00000615061 RBAKQ9NYW8 714 aaPredicted RBP18.14■□□□□ 0.5
CBWD3-211ENST00000615061 UBE4BO95155 1302 aa18.14■□□□□ 0.5
CBWD3-211ENST00000615061 C2orf16Q68DN1 1984 aa18.14■□□□□ 0.49
CBWD3-211ENST00000615061 LDHAP00338 332 aaKnown RBP18.14■□□□□ 0.49
CBWD3-211ENST00000615061 ADH1AP07327 375 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms