RNA–Protein interactions for RNA: ENST00000614929.4

SNX21-213, Transcript of sorting nexin family member 21, humanhuman

TSL 5 BASIC

Gene SNX21, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-213ENST00000614929 NPHP3-ACAD11A0A0J9YXS1 232 aa21.12■□□□□ 0.97
SNX21-213ENST00000614929 CLDN3O15551 220 aa21.12■□□□□ 0.97
SNX21-213ENST00000614929 HARSP12081 509 aaKnown RBP21.12■□□□□ 0.97
SNX21-213ENST00000614929 LONP1P36776 959 aaKnown RBP21.12■□□□□ 0.97
SNX21-213ENST00000614929 UBA7P41226 1012 aa21.12■□□□□ 0.97
SNX21-213ENST00000614929 ZNF131P52739 623 aa21.12■□□□□ 0.97
SNX21-213ENST00000614929 MRPL58Q14197 206 aaKnown RBP21.12■□□□□ 0.97
SNX21-213ENST00000614929 VARS2Q5ST30 1063 aaKnown RBP21.12■□□□□ 0.97
SNX21-213ENST00000614929 SIX5Q8N196 739 aa21.12■□□□□ 0.97
SNX21-213ENST00000614929 FLCNQ8NFG4 579 aa21.12■□□□□ 0.97
SNX21-213ENST00000614929 C18orf25Q96B23 403 aaPredicted RBP21.12■□□□□ 0.97
SNX21-213ENST00000614929 REEP2Q9BRK0 252 aa21.12■□□□□ 0.97
SNX21-213ENST00000614929 HAPLN2Q9GZV7 340 aa21.12■□□□□ 0.97
SNX21-213ENST00000614929 PLEKHA5Q9HAU0 1116 aa21.12■□□□□ 0.97
SNX21-213ENST00000614929 CDH7Q9ULB5 785 aa21.12■□□□□ 0.97
SNX21-213ENST00000614929 H0Y858 1186 aa21.11■□□□□ 0.97
SNX21-213ENST00000614929 CCL16O15467 120 aa21.11■□□□□ 0.97
SNX21-213ENST00000614929 ABLIM3O94929 683 aa21.11■□□□□ 0.97
SNX21-213ENST00000614929 PIGRP01833 764 aa21.11■□□□□ 0.97
SNX21-213ENST00000614929 NTHL1P78549 312 aa21.11■□□□□ 0.97
SNX21-213ENST00000614929 CACNB1Q02641 598 aaPredicted RBP21.11■□□□□ 0.97
SNX21-213ENST00000614929 HAUS6Q7Z4H7 955 aa21.11■□□□□ 0.97
SNX21-213ENST00000614929 GPBP1Q86WP2 473 aa21.11■□□□□ 0.97
SNX21-213ENST00000614929 ZNF461Q8TAF7 563 aa21.11■□□□□ 0.97
SNX21-213ENST00000614929 SUSD3Q96L08 255 aa21.11■□□□□ 0.97
SNX21-213ENST00000614929 RTP3Q9BQQ7 232 aa21.11■□□□□ 0.97
SNX21-213ENST00000614929 SLC2A4RGQ9NR83 387 aa21.11■□□□□ 0.97
SNX21-213ENST00000614929 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.11■□□□□ 0.97
SNX21-213ENST00000614929 TTC26A0AVF1 554 aa21.1■□□□□ 0.97
SNX21-213ENST00000614929 ARHGEF37A1IGU5 675 aa21.1■□□□□ 0.97
SNX21-213ENST00000614929 KRBA1A5PL33 1030 aa21.1■□□□□ 0.97
SNX21-213ENST00000614929 CFHP08603 1231 aa21.1■□□□□ 0.97
SNX21-213ENST00000614929 CLTAP09496 248 aa21.1■□□□□ 0.97
SNX21-213ENST00000614929 ROR1Q01973 937 aa21.1■□□□□ 0.97
SNX21-213ENST00000614929 GRIN1Q05586 938 aa21.1■□□□□ 0.97
SNX21-213ENST00000614929 SF3A1Q15459 793 aaKnown RBP21.1■□□□□ 0.97
SNX21-213ENST00000614929 SEZ6Q53EL9 994 aa21.1■□□□□ 0.97
SNX21-213ENST00000614929 ATOH1Q92858 354 aaPredicted RBP21.1■□□□□ 0.97
SNX21-213ENST00000614929 FGF13Q92913 245 aa21.1■□□□□ 0.97
SNX21-213ENST00000614929 FAM86C1Q9NVL1 165 aa21.1■□□□□ 0.97
SNX21-213ENST00000614929 KCNH3Q9ULD8 1083 aa21.1■□□□□ 0.97
SNX21-213ENST00000614929 NUB1Q9Y5A7 615 aa21.1■□□□□ 0.97
SNX21-213ENST00000614929 NUMBLQ9Y6R0 609 aa21.1■□□□□ 0.97
SNX21-213ENST00000614929 WDR27A2RRH5 827 aa21.09■□□□□ 0.97
SNX21-213ENST00000614929 PROB1E7EW31 1015 aa21.09■□□□□ 0.97
SNX21-213ENST00000614929 H7C4K7 107 aa21.09■□□□□ 0.97
SNX21-213ENST00000614929 PI15O43692 258 aa21.09■□□□□ 0.97
SNX21-213ENST00000614929 FAM189A1O60320 539 aa21.09■□□□□ 0.97
SNX21-213ENST00000614929 PLCG1P19174 1290 aa21.09■□□□□ 0.97
SNX21-213ENST00000614929 ZBTB6Q15916 424 aa21.09■□□□□ 0.97
SNX21-213ENST00000614929 KYAT1Q16773 422 aa21.09■□□□□ 0.97
SNX21-213ENST00000614929 ITFG1Q8TB96 612 aa21.09■□□□□ 0.97
SNX21-213ENST00000614929 RAD54LQ92698 747 aa21.09■□□□□ 0.97
SNX21-213ENST00000614929 FGF14Q92915 247 aa21.09■□□□□ 0.97
SNX21-213ENST00000614929 CCSER1Q9C0I3 900 aa21.09■□□□□ 0.97
SNX21-213ENST00000614929 PARVGQ9HBI0 331 aa21.09■□□□□ 0.97
SNX21-213ENST00000614929 AVENQ9NQS1 362 aaPredicted RBP21.09■□□□□ 0.97
SNX21-213ENST00000614929 DNMT3BQ9UBC3 853 aaKnown RBP21.09■□□□□ 0.97
SNX21-213ENST00000614929 TBX20Q9UMR3 447 aa21.09■□□□□ 0.97
SNX21-213ENST00000614929 POLIQ9UNA4 740 aa21.09■□□□□ 0.97
SNX21-213ENST00000614929 ZFHX2Q9C0A1 2572 aaPredicted RBP21.08■□□□□ 0.97
SNX21-213ENST00000614929 MIA3Q5JRA6 1907 aa21.08■□□□□ 0.97
SNX21-213ENST00000614929 ADRB2P07550 413 aa21.08■□□□□ 0.97
SNX21-213ENST00000614929 CXCL8P10145 99 aa21.08■□□□□ 0.97
SNX21-213ENST00000614929 ATF2P15336 505 aa21.08■□□□□ 0.97
SNX21-213ENST00000614929 PDCP20941 246 aa21.08■□□□□ 0.97
SNX21-213ENST00000614929 LRPAP1P30533 357 aa21.08■□□□□ 0.97
SNX21-213ENST00000614929 KARSQ15046 597 aaKnown RBP21.08■□□□□ 0.97
SNX21-213ENST00000614929 MTSS1LQ765P7 747 aa21.08■□□□□ 0.97
SNX21-213ENST00000614929 CCDC105Q8IYK2 499 aa21.08■□□□□ 0.97
SNX21-213ENST00000614929 GPR152Q8TDT2 470 aa21.08■□□□□ 0.97
SNX21-213ENST00000614929 TSPAN18Q96SJ8 248 aa21.08■□□□□ 0.97
SNX21-213ENST00000614929 FIZ1Q96SL8 496 aa21.08■□□□□ 0.97
SNX21-213ENST00000614929 HCFC1R1Q9NWW0 138 aa21.08■□□□□ 0.97
SNX21-213ENST00000614929 TUBGCP4Q9UGJ1 667 aa21.08■□□□□ 0.97
SNX21-213ENST00000614929 FBXL5Q9UKA1 691 aa21.08■□□□□ 0.97
SNX21-213ENST00000614929 FAM13AO94988 1023 aa21.07■□□□□ 0.96
SNX21-213ENST00000614929 CYP3A5P20815 502 aa21.07■□□□□ 0.96
SNX21-213ENST00000614929 ABCD1P33897 745 aa21.07■□□□□ 0.96
SNX21-213ENST00000614929 LIG4P49917 911 aa21.07■□□□□ 0.96
SNX21-213ENST00000614929 MCM6Q14566 821 aa21.07■□□□□ 0.96
SNX21-213ENST00000614929 PABPC1LQ4VXU2 614 aaKnown RBP21.07■□□□□ 0.96
SNX21-213ENST00000614929 TPGS2Q68CL5 300 aa21.07■□□□□ 0.96
SNX21-213ENST00000614929 PHLDB3Q6NSJ2 640 aa21.07■□□□□ 0.96
SNX21-213ENST00000614929 PARM1Q6UWI2 310 aa21.07■□□□□ 0.96
SNX21-213ENST00000614929 NPAS3Q8IXF0 933 aa21.07■□□□□ 0.96
SNX21-213ENST00000614929 TCEAL8Q8IYN2 117 aa21.07■□□□□ 0.96
SNX21-213ENST00000614929 MYCT1Q8N699 235 aa21.07■□□□□ 0.96
SNX21-213ENST00000614929 APPL2Q8NEU8 664 aa21.07■□□□□ 0.96
SNX21-213ENST00000614929 LARP4BQ92615 738 aaKnown RBP21.07■□□□□ 0.96
SNX21-213ENST00000614929 BICD1Q96G01 975 aa21.07■□□□□ 0.96
SNX21-213ENST00000614929 RPP25Q9BUL9 199 aaKnown RBP21.07■□□□□ 0.96
SNX21-213ENST00000614929 M0QZQ0 153 aa21.06■□□□□ 0.96
SNX21-213ENST00000614929 HNRNPDLO14979 420 aaKnown RBP21.06■□□□□ 0.96
SNX21-213ENST00000614929 OGTO15294 1046 aa21.06■□□□□ 0.96
SNX21-213ENST00000614929 TRAK2O60296 914 aa21.06■□□□□ 0.96
SNX21-213ENST00000614929 MCM4P33991 863 aa21.06■□□□□ 0.96
SNX21-213ENST00000614929 NBL1P41271 181 aa21.06■□□□□ 0.96
SNX21-213ENST00000614929 TNFSF9P41273 254 aa21.06■□□□□ 0.96
SNX21-213ENST00000614929 MATR3P43243 847 aaKnown RBP eCLIP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms