RNA–Protein interactions for RNA: ENST00000614000.4

SYNRG-220, Transcript of synergin gamma, humanhuman

TSL 2

Gene SYNRG, Length 4,234 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-220ENST00000614000 PIK3CDO00329 1044 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 WBP4O75554 376 aaKnown RBP5.87□□□□□ -1.47
SYNRG-220ENST00000614000 SERPING1P05155 500 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 KRT19P08727 400 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 HOXC6P09630 235 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 DSG3P32926 999 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 SOX11P35716 441 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 RFC5P40937 340 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 PSMD7P51665 324 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 USH1GQ495M9 461 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 C4orf33Q8N1A6 199 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 INPP5DQ92835 1189 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 CFAP36Q96G28 342 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 DHTKD1Q96HY7 919 aaPredicted RBP5.87□□□□□ -1.47
SYNRG-220ENST00000614000 C9orf72Q96LT7 481 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 PTPN18Q99952 460 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 UPF3AQ9H1J1 476 aaKnown RBP5.87□□□□□ -1.47
SYNRG-220ENST00000614000 ATP6V0A4Q9HBG4 840 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 SH3GLB2Q9NR46 395 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 ZSWIM5Q9P217 1185 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 STX18Q9P2W9 335 aaKnown RBP5.87□□□□□ -1.47
SYNRG-220ENST00000614000 GINS2Q9Y248 185 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 CSADQ9Y600 493 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 ARHGEF9O43307 516 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 UBOX5O94941 541 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 PRCPP42785 496 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 NSFP46459 744 aaKnown RBP5.87□□□□□ -1.47
SYNRG-220ENST00000614000 ADCY7P51828 1080 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 ZNF543Q08ER8 600 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 THOC5Q13769 683 aaKnown RBP5.87□□□□□ -1.47
SYNRG-220ENST00000614000 NCAPHQ15003 741 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 TRIM16LQ309B1 348 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 KIAA1755Q5JYT7 1200 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 TEX9Q8N6V9 391 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 PPP1R36Q96LQ0 422 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 SERPINI1Q99574 410 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 POLR3CQ9BUI4 534 aaPredicted RBP5.87□□□□□ -1.47
SYNRG-220ENST00000614000 SLC13A1Q9BZW2 595 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 SNX25Q9H3E2 840 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 FAM217BQ9NTX9 383 aaPredicted RBP5.87□□□□□ -1.47
SYNRG-220ENST00000614000 ANKFY1Q9P2R3 1169 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 HAO1Q9UJM8 370 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 APOBEC2Q9Y235 224 aaKnown RBP5.87□□□□□ -1.47
SYNRG-220ENST00000614000 NOC2LQ9Y3T9 749 aaKnown RBP5.87□□□□□ -1.47
SYNRG-220ENST00000614000 ZNF536O15090 1300 aa5.87□□□□□ -1.47
SYNRG-220ENST00000614000 USP17L15C9J2P7 530 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 USP17L10C9JJH3 530 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 USP17L13C9JLJ4 530 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 USP17L11C9JVI0 530 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 USP17L18D6R9N7 530 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 USP17L22D6RA61 530 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 USP17L17D6RBQ6 530 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 USP17L19D6RCP7 530 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 USP17L20D6RJB6 530 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 SMAPO00193 183 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 COPEO14579 308 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 TMCC1O94876 653 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 ATP6V1G2O95670 118 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 SCG2P13521 617 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 NQO1P15559 274 aaKnown RBP5.86□□□□□ -1.47
SYNRG-220ENST00000614000 CACNB3P54284 484 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 CACNA2D1P54289 1103 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 ALDH18A1P54886 795 aaKnown RBP5.86□□□□□ -1.47
SYNRG-220ENST00000614000 MAP3K7CLP57077 242 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 OCRLQ01968 901 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 USP17L24Q0WX57 530 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 DNAJC3Q13217 504 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 BYSLQ13895 437 aaKnown RBP5.86□□□□□ -1.47
SYNRG-220ENST00000614000 NTRK3Q16288 839 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 RINT1Q6NUQ1 792 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 IYDQ6PHW0 289 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 CDR2LQ86X02 465 aaPredicted RBP5.86□□□□□ -1.47
SYNRG-220ENST00000614000 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.86□□□□□ -1.47
SYNRG-220ENST00000614000 HNRNPLLQ8WVV9 542 aaKnown RBP5.86□□□□□ -1.47
SYNRG-220ENST00000614000 SEPT8Q92599 483 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 PRCCQ92733 491 aaPredicted RBP5.86□□□□□ -1.47
SYNRG-220ENST00000614000 CEP95Q96GE4 821 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 KLF6Q99612 283 aaPredicted RBP5.86□□□□□ -1.47
SYNRG-220ENST00000614000 COQ7Q99807 217 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 CCT7Q99832 543 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 SH3GL2Q99962 352 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 CALN1Q9BXU9 219 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 SLC38A10Q9HBR0 1119 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 GCNT4Q9P109 453 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 PNMA3Q9UL41 463 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 KIAA1024Q9UPX6 916 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 C15orf41Q9Y2V0 281 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 TAF6LQ9Y6J9 622 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 DOCK5Q9H7D0 1870 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 DNAJC25-GNG10A0A024R161 153 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 LOC100653049A0A140TA62 436 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 LINC00854A0A1B0GVQ3 168 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 B2RBV5 119 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 M0R2N6 131 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 KRT34O76011 436 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 MARK3P27448 753 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 ATP1A4Q13733 1029 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 KRT81Q14533 505 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 FAM110CQ1W6H9 321 aa5.86□□□□□ -1.47
SYNRG-220ENST00000614000 DEFB115Q30KQ5 88 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms