RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 SLC27A1Q6PCB7 646 aa12.39□□□□□ -0.43
SLIRP-212ENST00000613856 FAM43BQ6ZT52 329 aaPredicted RBP12.39□□□□□ -0.43
SLIRP-212ENST00000613856 TMC6Q7Z403 805 aa12.39□□□□□ -0.43
SLIRP-212ENST00000613856 ZBTB33Q86T24 672 aa12.39□□□□□ -0.43
SLIRP-212ENST00000613856 RDH13Q8NBN7 331 aa12.39□□□□□ -0.43
SLIRP-212ENST00000613856 PLEKHO2Q8TD55 490 aa12.39□□□□□ -0.43
SLIRP-212ENST00000613856 PARD3BQ8TEW8 1205 aa12.39□□□□□ -0.43
SLIRP-212ENST00000613856 MRPL38Q96DV4 380 aaKnown RBP12.39□□□□□ -0.43
SLIRP-212ENST00000613856 IQCDQ96DY2 449 aa12.39□□□□□ -0.43
SLIRP-212ENST00000613856 CPB2Q96IY4 423 aa12.39□□□□□ -0.43
SLIRP-212ENST00000613856 RBAKQ9NYW8 714 aaPredicted RBP12.39□□□□□ -0.43
SLIRP-212ENST00000613856 NOC2LQ9Y3T9 749 aaKnown RBP12.39□□□□□ -0.43
SLIRP-212ENST00000613856 TRIP11Q15643 1979 aa12.39□□□□□ -0.43
SLIRP-212ENST00000613856 ABHD14A-ACY1A0A1B0GW23 586 aa12.38□□□□□ -0.43
SLIRP-212ENST00000613856 LRRIQ3A6PVS8 624 aaPredicted RBP12.38□□□□□ -0.43
SLIRP-212ENST00000613856 GOLGA6L6A8MZA4 724 aa12.38□□□□□ -0.43
SLIRP-212ENST00000613856 PES1O00541 588 aaKnown RBP12.38□□□□□ -0.43
SLIRP-212ENST00000613856 GPR182O15218 404 aa12.38□□□□□ -0.43
SLIRP-212ENST00000613856 RPS6KA5O75582 802 aa12.38□□□□□ -0.43
SLIRP-212ENST00000613856 CLTAP09496 248 aa12.38□□□□□ -0.43
SLIRP-212ENST00000613856 TRIM49P0CI25 452 aa12.38□□□□□ -0.43
SLIRP-212ENST00000613856 TRIM49CP0CI26 452 aa12.38□□□□□ -0.43
SLIRP-212ENST00000613856 HARSP12081 509 aaKnown RBP12.38□□□□□ -0.43
SLIRP-212ENST00000613856 GTF2F1P35269 517 aaKnown RBP eCLIP12.38□□□□□ -0.43
SLIRP-212ENST00000613856 GRM5P41594 1212 aa12.38□□□□□ -0.43
SLIRP-212ENST00000613856 FMO5P49326 533 aa12.38□□□□□ -0.43
SLIRP-212ENST00000613856 ACOT2P49753 483 aa12.38□□□□□ -0.43
SLIRP-212ENST00000613856 HTRA4P83105 476 aaPredicted RBP12.38□□□□□ -0.43
SLIRP-212ENST00000613856 TBX2Q13207 712 aaPredicted RBP12.38□□□□□ -0.43
SLIRP-212ENST00000613856 FIGNQ5HY92 759 aa12.38□□□□□ -0.43
SLIRP-212ENST00000613856 ZBTB41Q5SVQ8 909 aa12.38□□□□□ -0.43
SLIRP-212ENST00000613856 TCERG1LQ5VWI1 586 aa12.38□□□□□ -0.43
SLIRP-212ENST00000613856 DBF4BQ8NFT6 615 aa12.38□□□□□ -0.43
SLIRP-212ENST00000613856 SP7Q8TDD2 431 aaPredicted RBP12.38□□□□□ -0.43
SLIRP-212ENST00000613856 ERVK-5Q9HDB9 667 aa12.38□□□□□ -0.43
SLIRP-212ENST00000613856 CHST12Q9NRB3 414 aa12.38□□□□□ -0.43
SLIRP-212ENST00000613856 PIN4Q9Y237 131 aaKnown RBP12.38□□□□□ -0.43
SLIRP-212ENST00000613856 SIK3Q9Y2K2 1263 aa12.38□□□□□ -0.43
SLIRP-212ENST00000613856 COL4A6Q14031 1691 aa12.38□□□□□ -0.43
SLIRP-212ENST00000613856 KIAA1671Q9BY89 1806 aa12.37□□□□□ -0.43
SLIRP-212ENST00000613856 IL18RAPO95256 599 aa12.37□□□□□ -0.43
SLIRP-212ENST00000613856 TNFSF9P41273 254 aa12.37□□□□□ -0.43
SLIRP-212ENST00000613856 DLG4P78352 724 aa12.37□□□□□ -0.43
SLIRP-212ENST00000613856 MYL7Q01449 175 aa12.37□□□□□ -0.43
SLIRP-212ENST00000613856 PAK2Q13177 524 aa12.37□□□□□ -0.43
SLIRP-212ENST00000613856 IKBKEQ14164 716 aa12.37□□□□□ -0.43
SLIRP-212ENST00000613856 LPIN1Q14693 890 aa12.37□□□□□ -0.43
SLIRP-212ENST00000613856 COL19A1Q14993 1142 aa12.37□□□□□ -0.43
SLIRP-212ENST00000613856 SYCP1Q15431 976 aa12.37□□□□□ -0.43
SLIRP-212ENST00000613856 CDR2LQ86X02 465 aaPredicted RBP12.37□□□□□ -0.43
SLIRP-212ENST00000613856 DRC7Q8IY82 874 aa12.37□□□□□ -0.43
SLIRP-212ENST00000613856 PABPC5Q96DU9 382 aaKnown RBP12.37□□□□□ -0.43
SLIRP-212ENST00000613856 CGRRF1Q99675 332 aa12.37□□□□□ -0.43
SLIRP-212ENST00000613856 TRAIPQ9BWF2 469 aa12.37□□□□□ -0.43
SLIRP-212ENST00000613856 TMEM8AQ9HCN3 771 aa12.37□□□□□ -0.43
SLIRP-212ENST00000613856 CLDND1Q9NY35 253 aa12.37□□□□□ -0.43
SLIRP-212ENST00000613856 ST3GAL5Q9UNP4 418 aa12.37□□□□□ -0.43
SLIRP-212ENST00000613856 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.37□□□□□ -0.436e-18■□□□□ 8
SLIRP-212ENST00000613856 LINC01565O15544 149 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 UPP2O95045 317 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 NPTXRO95502 500 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 STAG3L1P0CL83 205 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 GHRP10912 638 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 MXI1P50539 228 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 AP3M2P53677 418 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 GSDMDP57764 484 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 PPP3CAQ08209 521 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 GPM6BQ13491 265 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 ENOX2Q16206 610 aaKnown RBP12.36□□□□□ -0.43
SLIRP-212ENST00000613856 CBWD6Q4V339 395 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 CBWD3Q5JTY5 395 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 CBWD5Q5RIA9 395 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 UBXN11Q5T124 520 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 GBP6Q6ZN66 633 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 C15orf39Q6ZRI6 1047 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 WDR49Q8IV35 697 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 ADHFE1Q8IWW8 467 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 CD302Q8IX05 232 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 THNSL1Q8IYQ7 743 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 CEP120Q8N960 986 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 SPC24Q8NBT2 197 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 CCDC127Q96BQ5 260 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 FNBP1Q96RU3 617 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 NUP58Q9BVL2 599 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 CCDC94Q9BW85 323 aaPredicted RBP12.36□□□□□ -0.43
SLIRP-212ENST00000613856 TTYH3Q9C0H2 523 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 AGO3Q9H9G7 860 aaKnown RBP12.36□□□□□ -0.43
SLIRP-212ENST00000613856 RPF1Q9H9Y2 349 aaKnown RBP12.36□□□□□ -0.43
SLIRP-212ENST00000613856 ALG13Q9NP73 1137 aaKnown RBP12.36□□□□□ -0.43
SLIRP-212ENST00000613856 PLCB1Q9NQ66 1216 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 FAM86C1Q9NVL1 165 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 COQ4Q9Y3A0 265 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 DAAM1Q9Y4D1 1078 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 INSL6Q9Y581 213 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 PLXNA3P51805 1871 aa12.36□□□□□ -0.43
SLIRP-212ENST00000613856 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.35□□□□□ -0.43
SLIRP-212ENST00000613856 A0A1W2PQJ5 194 aa12.35□□□□□ -0.43
SLIRP-212ENST00000613856 H3BNC9 293 aa12.35□□□□□ -0.43
SLIRP-212ENST00000613856 TBX10O75333 385 aa12.35□□□□□ -0.43
SLIRP-212ENST00000613856 PARNO95453 639 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms