RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 LRPAP1P30533 357 aa18.01■□□□□ 0.47
IRF1-211ENST00000613424 MYBPC2Q14324 1141 aa18.01■□□□□ 0.47
IRF1-211ENST00000613424 NFIL3Q16649 462 aa18.01■□□□□ 0.47
IRF1-211ENST00000613424 TIGD5Q53EQ6 642 aa18.01■□□□□ 0.47
IRF1-211ENST00000613424 PLPP4Q5VZY2 271 aa18.01■□□□□ 0.47
IRF1-211ENST00000613424 CENPPQ6IPU0 288 aa18.01■□□□□ 0.47
IRF1-211ENST00000613424 PDE12Q6L8Q7 609 aaKnown RBP18.01■□□□□ 0.47
IRF1-211ENST00000613424 NT5DC4Q86YG4 428 aa18.01■□□□□ 0.47
IRF1-211ENST00000613424 EFCAB13Q8IY85 973 aa18.01■□□□□ 0.47
IRF1-211ENST00000613424 RNF168Q8IYW5 571 aaPredicted RBP18.01■□□□□ 0.47
IRF1-211ENST00000613424 C3orf58Q8NDZ4 430 aa18.01■□□□□ 0.47
IRF1-211ENST00000613424 BEST2Q8NFU1 509 aa18.01■□□□□ 0.47
IRF1-211ENST00000613424 MAFAQ8NHW3 353 aaPredicted RBP18.01■□□□□ 0.47
IRF1-211ENST00000613424 ZBP1Q9H171 429 aa18.01■□□□□ 0.47
IRF1-211ENST00000613424 NUP62CLQ9H1M0 184 aa18.01■□□□□ 0.47
IRF1-211ENST00000613424 NSUN3Q9H649 340 aaKnown RBP18.01■□□□□ 0.47
IRF1-211ENST00000613424 NGRNQ9NPE2 291 aaKnown RBP18.01■□□□□ 0.47
IRF1-211ENST00000613424 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.01■□□□□ 0.47
IRF1-211ENST00000613424 COL6A3P12111 3177 aa18.01■□□□□ 0.47
IRF1-211ENST00000613424 PPP1R3GB7ZBB8 358 aa18■□□□□ 0.47
IRF1-211ENST00000613424 SOD2P04179 222 aa18■□□□□ 0.47
IRF1-211ENST00000613424 CTSAP10619 480 aa18■□□□□ 0.47
IRF1-211ENST00000613424 CASP4P49662 377 aa18■□□□□ 0.47
IRF1-211ENST00000613424 ZCWPW2Q504Y3 356 aa18■□□□□ 0.47
IRF1-211ENST00000613424 TCEAL5Q5H9L2 206 aa18■□□□□ 0.47
IRF1-211ENST00000613424 MRPL43Q8N983 215 aaKnown RBP18■□□□□ 0.47
IRF1-211ENST00000613424 TRIML1Q8N9V2 468 aa18■□□□□ 0.47
IRF1-211ENST00000613424 AUTS2Q8WXX7 1259 aa18■□□□□ 0.47
IRF1-211ENST00000613424 MFSD14AQ96MC6 490 aa18■□□□□ 0.47
IRF1-211ENST00000613424 REV3LO60673 3130 aa18■□□□□ 0.47
IRF1-211ENST00000613424 ATG2AQ2TAZ0 1938 aa18■□□□□ 0.47
IRF1-211ENST00000613424 SPTBN5Q9NRC6 3674 aaKnown RBP18■□□□□ 0.47
IRF1-211ENST00000613424 HIDE1A8MVS5 230 aa17.99■□□□□ 0.47
IRF1-211ENST00000613424 TFAMQ00059 246 aaKnown RBP17.99■□□□□ 0.47
IRF1-211ENST00000613424 CYP24A1Q07973 514 aa17.99■□□□□ 0.47
IRF1-211ENST00000613424 ADAM9Q13443 819 aa17.99■□□□□ 0.47
IRF1-211ENST00000613424 STIM1Q13586 685 aa17.99■□□□□ 0.47
IRF1-211ENST00000613424 SMC1AQ14683 1233 aaKnown RBP17.99■□□□□ 0.47
IRF1-211ENST00000613424 BMS1Q14692 1282 aaKnown RBP17.99■□□□□ 0.47
IRF1-211ENST00000613424 PSMD6Q15008 389 aa17.99■□□□□ 0.47
IRF1-211ENST00000613424 SURF1Q15526 300 aa17.99■□□□□ 0.47
IRF1-211ENST00000613424 ANKRD40Q6AI12 368 aa17.99■□□□□ 0.47
IRF1-211ENST00000613424 ADGRD2Q7Z7M1 963 aa17.99■□□□□ 0.47
IRF1-211ENST00000613424 CACTINQ8WUQ7 758 aaKnown RBP17.99■□□□□ 0.47
IRF1-211ENST00000613424 DHTKD1Q96HY7 919 aaPredicted RBP17.99■□□□□ 0.47
IRF1-211ENST00000613424 HERC2P3Q9BVR0 1158 aa17.99■□□□□ 0.47
IRF1-211ENST00000613424 CHST7Q9NS84 486 aa17.99■□□□□ 0.47
IRF1-211ENST00000613424 DPP3Q9NY33 737 aa17.99■□□□□ 0.47
IRF1-211ENST00000613424 SF3B1O75533 1304 aaKnown RBP eCLIP17.98■□□□□ 0.472e-6■■■■■ 130.2
IRF1-211ENST00000613424 C2orf71A6NGG8 1288 aa17.98■□□□□ 0.47
IRF1-211ENST00000613424 MBD3O95983 291 aa17.98■□□□□ 0.47
IRF1-211ENST00000613424 NR2F2P24468 414 aa17.98■□□□□ 0.47
IRF1-211ENST00000613424 RPL13P26373 211 aaKnown RBP17.98■□□□□ 0.47
IRF1-211ENST00000613424 CA8P35219 290 aa17.98■□□□□ 0.47
IRF1-211ENST00000613424 PPP1R2P41236 205 aa17.98■□□□□ 0.47
IRF1-211ENST00000613424 BRCC3P46736 316 aa17.98■□□□□ 0.47
IRF1-211ENST00000613424 PMS1P54277 932 aaKnown RBP17.98■□□□□ 0.47
IRF1-211ENST00000613424 EDRF1Q3B7T1 1238 aa17.98■□□□□ 0.47
IRF1-211ENST00000613424 USP41Q3LFD5 358 aa17.98■□□□□ 0.47
IRF1-211ENST00000613424 FAM171A1Q5VUB5 890 aa17.98■□□□□ 0.47
IRF1-211ENST00000613424 C9orf57Q5W0N0 161 aa17.98■□□□□ 0.47
IRF1-211ENST00000613424 CEP135Q66GS9 1140 aa17.98■□□□□ 0.47
IRF1-211ENST00000613424 LMBRD2Q68DH5 695 aaPredicted RBP17.98■□□□□ 0.47
IRF1-211ENST00000613424 RBM23Q86U06 439 aaKnown RBP17.98■□□□□ 0.47
IRF1-211ENST00000613424 CCDC127Q96BQ5 260 aa17.98■□□□□ 0.47
IRF1-211ENST00000613424 FAM84AQ96KN4 292 aa17.98■□□□□ 0.47
IRF1-211ENST00000613424 B3GALT6Q96L58 329 aa17.98■□□□□ 0.47
IRF1-211ENST00000613424 POP1Q99575 1024 aaKnown RBP17.98■□□□□ 0.47
IRF1-211ENST00000613424 INTS13Q9NVM9 706 aa17.98■□□□□ 0.47
IRF1-211ENST00000613424 FRMD4BQ9Y2L6 1034 aa17.98■□□□□ 0.47
IRF1-211ENST00000613424 IRAK3Q9Y616 596 aa17.98■□□□□ 0.47
IRF1-211ENST00000613424 ANO9A1A5B4 782 aa17.97■□□□□ 0.47
IRF1-211ENST00000613424 TRIM49BA6NDI0 452 aa17.97■□□□□ 0.47
IRF1-211ENST00000613424 I3L4J1 428 aa17.97■□□□□ 0.47
IRF1-211ENST00000613424 PIRO00625 290 aa17.97■□□□□ 0.47
IRF1-211ENST00000613424 C2CD2LO14523 706 aa17.97■□□□□ 0.47
IRF1-211ENST00000613424 PSMA7O14818 248 aa17.97■□□□□ 0.47
IRF1-211ENST00000613424 PPEF2O14830 753 aa17.97■□□□□ 0.47
IRF1-211ENST00000613424 PER2O15055 1255 aa17.97■□□□□ 0.47
IRF1-211ENST00000613424 TRAPPC3O43617 180 aa17.97■□□□□ 0.47
IRF1-211ENST00000613424 LILRB3O75022 631 aa17.97■□□□□ 0.47
IRF1-211ENST00000613424 DLATP10515 647 aaKnown RBP17.97■□□□□ 0.47
IRF1-211ENST00000613424 CCNE1P24864 410 aa17.97■□□□□ 0.47
IRF1-211ENST00000613424 DSG1Q02413 1049 aa17.97■□□□□ 0.47
IRF1-211ENST00000613424 ELAVL2Q12926 359 aaKnown RBP17.97■□□□□ 0.47
IRF1-211ENST00000613424 PTPN14Q15678 1187 aa17.97■□□□□ 0.47
IRF1-211ENST00000613424 KIAA0319Q5VV43 1072 aa17.97■□□□□ 0.47
IRF1-211ENST00000613424 KLHL10Q6JEL2 608 aa17.97■□□□□ 0.47
IRF1-211ENST00000613424 KIAA1841Q6NSI8 718 aa17.97■□□□□ 0.47
IRF1-211ENST00000613424 CEP57Q86XR8 500 aa17.97■□□□□ 0.47
IRF1-211ENST00000613424 OR5B17Q8NGF7 314 aa17.97■□□□□ 0.47
IRF1-211ENST00000613424 PLEKHO2Q8TD55 490 aa17.97■□□□□ 0.47
IRF1-211ENST00000613424 FNBP1Q96RU3 617 aa17.97■□□□□ 0.47
IRF1-211ENST00000613424 TSG101Q99816 390 aa17.97■□□□□ 0.47
IRF1-211ENST00000613424 GZF1Q9H116 711 aaPredicted RBP17.97■□□□□ 0.47
IRF1-211ENST00000613424 IGFLR1Q9H665 355 aa17.97■□□□□ 0.47
IRF1-211ENST00000613424 TLE6Q9H808 572 aa17.97■□□□□ 0.47
IRF1-211ENST00000613424 MRPL17Q9NRX2 175 aaKnown RBP17.97■□□□□ 0.47
IRF1-211ENST00000613424 NUB1Q9Y5A7 615 aa17.97■□□□□ 0.47
IRF1-211ENST00000613424 PTPRJQ12913 1337 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms