RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 SEL1LQ9UBV2 794 aa13.8□□□□□ -0.2
CSTF1-208ENST00000613138 KCNG1Q9UIX4 513 aa13.8□□□□□ -0.2
CSTF1-208ENST00000613138 FAM50BQ9Y247 325 aa13.8□□□□□ -0.2
CSTF1-208ENST00000613138 TSC2P49815 1807 aa13.8□□□□□ -0.2
CSTF1-208ENST00000613138 TNFRSF10AO00220 468 aa13.79□□□□□ -0.2
CSTF1-208ENST00000613138 RFPL2O75678 378 aa13.79□□□□□ -0.2
CSTF1-208ENST00000613138 CMA1P23946 247 aa13.79□□□□□ -0.2
CSTF1-208ENST00000613138 ZP2Q05996 745 aa13.79□□□□□ -0.2
CSTF1-208ENST00000613138 EHHADHQ08426 723 aa13.79□□□□□ -0.2
CSTF1-208ENST00000613138 TMC5Q6UXY8 1006 aa13.79□□□□□ -0.2
CSTF1-208ENST00000613138 NELFCDQ8IXH7 590 aa13.79□□□□□ -0.2
CSTF1-208ENST00000613138 TMEM87AQ8NBN3 555 aa13.79□□□□□ -0.2
CSTF1-208ENST00000613138 LNX1Q8TBB1 728 aaPredicted RBP13.79□□□□□ -0.2
CSTF1-208ENST00000613138 POMGNT1Q8WZA1 660 aa13.79□□□□□ -0.2
CSTF1-208ENST00000613138 SUSD6Q92537 303 aa13.79□□□□□ -0.2
CSTF1-208ENST00000613138 CLSTN3Q9BQT9 956 aa13.79□□□□□ -0.2
CSTF1-208ENST00000613138 TTPALQ9BTX7 342 aa13.79□□□□□ -0.2
CSTF1-208ENST00000613138 CUEDC2Q9H467 287 aa13.79□□□□□ -0.2
CSTF1-208ENST00000613138 RXFP1Q9HBX9 757 aa13.79□□□□□ -0.2
CSTF1-208ENST00000613138 SLC39A2Q9NP94 309 aa13.79□□□□□ -0.2
CSTF1-208ENST00000613138 AGO2Q9UKV8 859 aaKnown RBP13.79□□□□□ -0.2
CSTF1-208ENST00000613138 STYXL1Q9Y6J8 313 aa13.79□□□□□ -0.2
CSTF1-208ENST00000613138 SF3B1O75533 1304 aaKnown RBP eCLIP13.79□□□□□ -0.2
CSTF1-208ENST00000613138 NOTCH4Q99466 2003 aa13.79□□□□□ -0.2
CSTF1-208ENST00000613138 DOCK8Q8NF50 2099 aa13.79□□□□□ -0.2
CSTF1-208ENST00000613138 SSTR3P32745 418 aaPredicted RBP13.78□□□□□ -0.2
CSTF1-208ENST00000613138 CDR1P51861 262 aa13.78□□□□□ -0.2
CSTF1-208ENST00000613138 PPP2R3AQ06190 1150 aa13.78□□□□□ -0.2
CSTF1-208ENST00000613138 ZBTB6Q15916 424 aa13.78□□□□□ -0.2
CSTF1-208ENST00000613138 PSMD5Q16401 504 aa13.78□□□□□ -0.2
CSTF1-208ENST00000613138 FAM26FQ5R3K3 315 aa13.78□□□□□ -0.2
CSTF1-208ENST00000613138 DCLRE1AQ6PJP8 1040 aa13.78□□□□□ -0.2
CSTF1-208ENST00000613138 UNC13DQ70J99 1090 aa13.78□□□□□ -0.2
CSTF1-208ENST00000613138 EPM2AIP1Q7L775 607 aaPredicted RBP13.78□□□□□ -0.2
CSTF1-208ENST00000613138 EFCAB13Q8IY85 973 aa13.78□□□□□ -0.2
CSTF1-208ENST00000613138 SYCP3Q8IZU3 236 aa13.78□□□□□ -0.2
CSTF1-208ENST00000613138 CASP10Q92851 521 aa13.78□□□□□ -0.2
CSTF1-208ENST00000613138 HVCN1Q96D96 273 aa13.78□□□□□ -0.2
CSTF1-208ENST00000613138 DDX27Q96GQ7 796 aaKnown RBP13.78□□□□□ -0.2
CSTF1-208ENST00000613138 FBXL18Q96ME1 805 aa13.78□□□□□ -0.2
CSTF1-208ENST00000613138 FAM213AQ9BRX8 229 aa13.78□□□□□ -0.2
CSTF1-208ENST00000613138 EMILIN2Q9BXX0 1053 aa13.78□□□□□ -0.2
CSTF1-208ENST00000613138 POMKQ9H5K3 350 aa13.78□□□□□ -0.2
CSTF1-208ENST00000613138 EPHX3Q9H6B9 360 aa13.78□□□□□ -0.2
CSTF1-208ENST00000613138 MAN1C1Q9NR34 630 aa13.78□□□□□ -0.2
CSTF1-208ENST00000613138 TIMM13Q9Y5L4 95 aaPredicted RBP13.78□□□□□ -0.2
CSTF1-208ENST00000613138 TMEM189-UBE2V1I3L0A0 370 aa13.77□□□□□ -0.21
CSTF1-208ENST00000613138 CLIC2O15247 247 aa13.77□□□□□ -0.21
CSTF1-208ENST00000613138 TGM5O43548 720 aa13.77□□□□□ -0.21
CSTF1-208ENST00000613138 ADRB2P07550 413 aa13.77□□□□□ -0.21
CSTF1-208ENST00000613138 SLFN14P0C7P3 912 aa13.77□□□□□ -0.21
CSTF1-208ENST00000613138 FGFR3P22607 806 aa13.77□□□□□ -0.21
CSTF1-208ENST00000613138 LMBRD2Q68DH5 695 aaPredicted RBP13.77□□□□□ -0.21
CSTF1-208ENST00000613138 CNNM4Q6P4Q7 775 aa13.77□□□□□ -0.21
CSTF1-208ENST00000613138 CEP57L1Q8IYX8 460 aa13.77□□□□□ -0.21
CSTF1-208ENST00000613138 GJD3Q8N144 294 aa13.77□□□□□ -0.21
CSTF1-208ENST00000613138 SCFD1Q8WVM8 642 aa13.77□□□□□ -0.21
CSTF1-208ENST00000613138 RPGRIP1Q96KN7 1286 aa13.77□□□□□ -0.21
CSTF1-208ENST00000613138 PCDHB13Q9Y5F0 798 aa13.77□□□□□ -0.21
CSTF1-208ENST00000613138 SPTLC1O15269 473 aa13.76□□□□□ -0.21
CSTF1-208ENST00000613138 TGFB1I1O43294 461 aa13.76□□□□□ -0.21
CSTF1-208ENST00000613138 MCM4P33991 863 aa13.76□□□□□ -0.21
CSTF1-208ENST00000613138 SYKP43405 635 aa13.76□□□□□ -0.21
CSTF1-208ENST00000613138 STK4Q13043 487 aa13.76□□□□□ -0.21
CSTF1-208ENST00000613138 KMT5BQ4FZB7 885 aa13.76□□□□□ -0.21
CSTF1-208ENST00000613138 ADHFE1Q8IWW8 467 aa13.76□□□□□ -0.21
CSTF1-208ENST00000613138 KIAA0895Q8NCT3 520 aa13.76□□□□□ -0.21
CSTF1-208ENST00000613138 PIK3R5Q8WYR1 880 aa13.76□□□□□ -0.21
CSTF1-208ENST00000613138 ERCC4Q92889 916 aaPredicted RBP13.76□□□□□ -0.21
CSTF1-208ENST00000613138 UROC1Q96N76 676 aa13.76□□□□□ -0.21
CSTF1-208ENST00000613138 PLEKHA5Q9HAU0 1116 aa13.76□□□□□ -0.21
CSTF1-208ENST00000613138 SLC38A7Q9NVC3 462 aa13.76□□□□□ -0.21
CSTF1-208ENST00000613138 PTPRJQ12913 1337 aa13.75□□□□□ -0.21
CSTF1-208ENST00000613138 FAM237AA0A1B0GTK4 181 aa13.75□□□□□ -0.21
CSTF1-208ENST00000613138 C19orf67A6NJJ6 358 aa13.75□□□□□ -0.21
CSTF1-208ENST00000613138 SPDYE4A6NLX3 237 aa13.75□□□□□ -0.21
CSTF1-208ENST00000613138 GLUD1P00367 558 aa13.75□□□□□ -0.21
CSTF1-208ENST00000613138 ADH1AP07327 375 aa13.75□□□□□ -0.21
CSTF1-208ENST00000613138 SRGAP2BP0DMP2 458 aa13.75□□□□□ -0.21
CSTF1-208ENST00000613138 OR1D2P34982 312 aa13.75□□□□□ -0.21
CSTF1-208ENST00000613138 AMPD3Q01432 767 aa13.75□□□□□ -0.21
CSTF1-208ENST00000613138 CBX2Q14781 532 aaPredicted RBP13.75□□□□□ -0.21
CSTF1-208ENST00000613138 TMEM132DQ14C87 1099 aa13.75□□□□□ -0.21
CSTF1-208ENST00000613138 VARS2Q5ST30 1063 aaKnown RBP13.75□□□□□ -0.21
CSTF1-208ENST00000613138 SPATA1Q5VX52 437 aa13.75□□□□□ -0.21
CSTF1-208ENST00000613138 SLFN12LQ6IEE8 588 aa13.75□□□□□ -0.21
CSTF1-208ENST00000613138 ARMCX5Q6P1M9 558 aa13.75□□□□□ -0.21
CSTF1-208ENST00000613138 LILRA6Q6PI73 481 aa13.75□□□□□ -0.21
CSTF1-208ENST00000613138 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.75□□□□□ -0.21
CSTF1-208ENST00000613138 CBWD2Q8IUF1 395 aa13.75□□□□□ -0.21
CSTF1-208ENST00000613138 ST13P5Q8NFI4 369 aaPredicted RBP13.75□□□□□ -0.21
CSTF1-208ENST00000613138 ZNF507Q8TCN5 953 aa13.75□□□□□ -0.21
CSTF1-208ENST00000613138 SCAND2PQ9GZW5 306 aaPredicted RBP13.75□□□□□ -0.21
CSTF1-208ENST00000613138 ADAM7Q9H2U9 754 aa13.75□□□□□ -0.21
CSTF1-208ENST00000613138 MAGEF1Q9HAY2 307 aa13.75□□□□□ -0.21
CSTF1-208ENST00000613138 PDE11AQ9HCR9 933 aa13.75□□□□□ -0.21
CSTF1-208ENST00000613138 FNIP2Q9P278 1114 aa13.75□□□□□ -0.21
CSTF1-208ENST00000613138 UBQLN1Q9UMX0 589 aaKnown RBP13.75□□□□□ -0.21
CSTF1-208ENST00000613138 EXOC7Q9UPT5 735 aa13.75□□□□□ -0.21
CSTF1-208ENST00000613138 NUB1Q9Y5A7 615 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms