RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 SLC10A6Q3KNW5 377 aa13.4□□□□□ -0.26
CBWD3-208ENST00000612050 RESP18Q5W5W9 173 aa13.4□□□□□ -0.26
CBWD3-208ENST00000612050 TMC5Q6UXY8 1006 aa13.4□□□□□ -0.26
CBWD3-208ENST00000612050 CCDC149Q6ZUS6 474 aa13.4□□□□□ -0.26
CBWD3-208ENST00000612050 PLCD3Q8N3E9 789 aa13.4□□□□□ -0.26
CBWD3-208ENST00000612050 TDRD5Q8NAT2 981 aaKnown RBP13.4□□□□□ -0.26
CBWD3-208ENST00000612050 SUSD6Q92537 303 aa13.4□□□□□ -0.26
CBWD3-208ENST00000612050 B3GALT6Q96L58 329 aa13.4□□□□□ -0.26
CBWD3-208ENST00000612050 TRIM9Q9C026 710 aa13.4□□□□□ -0.26
CBWD3-208ENST00000612050 S1PR5Q9H228 398 aa13.4□□□□□ -0.26
CBWD3-208ENST00000612050 ASB7Q9H672 318 aa13.4□□□□□ -0.26
CBWD3-208ENST00000612050 GOLGA2P5Q9HBQ8 144 aa13.4□□□□□ -0.26
CBWD3-208ENST00000612050 ZDHHC7Q9NXF8 308 aa13.4□□□□□ -0.26
CBWD3-208ENST00000612050 DERAQ9Y315 318 aa13.4□□□□□ -0.26
CBWD3-208ENST00000612050 PDCD11Q14690 1871 aaKnown RBP13.4□□□□□ -0.26
CBWD3-208ENST00000612050 A0A087X0B3 334 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 TTC26A0AVF1 554 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 C19orf67A6NJJ6 358 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 IL18RAPO95256 599 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 EFEMP2O95967 443 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 GARTP22102 1010 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 ELF1P32519 619 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 TMEM132DQ14C87 1099 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 RTP2Q5QGT7 225 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 ARMCX5Q6P1M9 558 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 PRSS55Q6UWB4 352 aaPredicted RBP13.39□□□□□ -0.27
CBWD3-208ENST00000612050 DSTYKQ6XUX3 929 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 USP37Q86T82 979 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 NT5DC4Q86YG4 428 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 KREMEN2Q8NCW0 462 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 CMASQ8NFW8 434 aaPredicted RBP13.39□□□□□ -0.27
CBWD3-208ENST00000612050 NOC3LQ8WTT2 800 aaKnown RBP13.39□□□□□ -0.27
CBWD3-208ENST00000612050 ZMAT2Q96NC0 199 aaKnown RBP13.39□□□□□ -0.27
CBWD3-208ENST00000612050 OXCT2Q9BYC2 517 aaPredicted RBP13.39□□□□□ -0.27
CBWD3-208ENST00000612050 CCDC195A0A1B0GUA6 201 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 FRMD3A2A2Y4 597 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 LACTBL1A8MY62 500 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 EIF3DO15371 548 aaKnown RBP eCLIP13.39□□□□□ -0.27
CBWD3-208ENST00000612050 TGM5O43548 720 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 XYLBO75191 536 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 MYL1P05976 194 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 FGFR3P22607 806 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 TNFSF9P41273 254 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 ACOT2P49753 483 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 ENOX2Q16206 610 aaKnown RBP13.39□□□□□ -0.27
CBWD3-208ENST00000612050 E2F4Q16254 413 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 FAM26FQ5R3K3 315 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 PPM1LQ5SGD2 360 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 AXDND1Q5T1B0 1012 aaPredicted RBP13.39□□□□□ -0.27
CBWD3-208ENST00000612050 ZNF280DQ6N043 979 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 UNC13DQ70J99 1090 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 RTL10Q7L3V2 364 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 HS2ST1Q7LGA3 356 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 OTOP3Q7RTS5 596 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 GPR149Q86SP6 731 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 C12orf76Q8N812 135 aaPredicted RBP13.39□□□□□ -0.27
CBWD3-208ENST00000612050 LNX1Q8TBB1 728 aaPredicted RBP13.39□□□□□ -0.27
CBWD3-208ENST00000612050 CACTINQ8WUQ7 758 aaKnown RBP13.39□□□□□ -0.27
CBWD3-208ENST00000612050 LEO1Q8WVC0 666 aaPredicted RBP13.39□□□□□ -0.27
CBWD3-208ENST00000612050 FIZ1Q96SL8 496 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 C7orf25Q9BPX7 421 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 CPSF3Q9UKF6 684 aaKnown RBP13.39□□□□□ -0.27
CBWD3-208ENST00000612050 BACE2Q9Y5Z0 518 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 STYXL1Q9Y6J8 313 aa13.39□□□□□ -0.27
CBWD3-208ENST00000612050 UBE4BO95155 1302 aa13.38□□□□□ -0.27
CBWD3-208ENST00000612050 PVALEFA0A1B0GWK0 134 aa13.38□□□□□ -0.27
CBWD3-208ENST00000612050 LOC730098B7Z3J9 87 aa13.38□□□□□ -0.27
CBWD3-208ENST00000612050 ANKRD63C9JTQ0 380 aa13.38□□□□□ -0.27
CBWD3-208ENST00000612050 PI4K2BG5E9Z4 385 aa13.38□□□□□ -0.27
CBWD3-208ENST00000612050 PPP1R37O75864 691 aa13.38□□□□□ -0.27
CBWD3-208ENST00000612050 SLFN14P0C7P3 912 aa13.38□□□□□ -0.27
CBWD3-208ENST00000612050 MYBP10242 640 aa13.38□□□□□ -0.27
CBWD3-208ENST00000612050 RPL17P18621 184 aaKnown RBP13.38□□□□□ -0.27
CBWD3-208ENST00000612050 CMA1P23946 247 aa13.38□□□□□ -0.27
CBWD3-208ENST00000612050 LRPAP1P30533 357 aa13.38□□□□□ -0.27
CBWD3-208ENST00000612050 AFMP43652 599 aa13.38□□□□□ -0.27
CBWD3-208ENST00000612050 BRCC3P46736 316 aa13.38□□□□□ -0.27
CBWD3-208ENST00000612050 SOX4Q06945 474 aaPredicted RBP13.38□□□□□ -0.27
CBWD3-208ENST00000612050 SPAG1Q07617 926 aa13.38□□□□□ -0.27
CBWD3-208ENST00000612050 SURF1Q15526 300 aa13.38□□□□□ -0.27
CBWD3-208ENST00000612050 TMEM31Q5JXX7 168 aa13.38□□□□□ -0.27
CBWD3-208ENST00000612050 CNNM4Q6P4Q7 775 aa13.38□□□□□ -0.27
CBWD3-208ENST00000612050 RNF135Q8IUD6 432 aa13.38□□□□□ -0.27
CBWD3-208ENST00000612050 SMG7Q92540 1137 aaKnown RBP13.38□□□□□ -0.27
CBWD3-208ENST00000612050 C18orf25Q96B23 403 aaPredicted RBP13.38□□□□□ -0.27
CBWD3-208ENST00000612050 FAM213AQ9BRX8 229 aa13.38□□□□□ -0.27
CBWD3-208ENST00000612050 CXCL16Q9H2A7 254 aa13.38□□□□□ -0.27
CBWD3-208ENST00000612050 POMKQ9H5K3 350 aa13.38□□□□□ -0.27
CBWD3-208ENST00000612050 KIAA1586Q9HCI6 787 aa13.38□□□□□ -0.27
CBWD3-208ENST00000612050 EXOC1Q9NV70 894 aa13.38□□□□□ -0.27
CBWD3-208ENST00000612050 MTRRQ9UBK8 725 aa13.38□□□□□ -0.27
CBWD3-208ENST00000612050 TUBGCP4Q9UGJ1 667 aa13.38□□□□□ -0.27
CBWD3-208ENST00000612050 USTQ9Y2C2 406 aa13.38□□□□□ -0.27
CBWD3-208ENST00000612050 C2CD2Q9Y426 696 aa13.38□□□□□ -0.27
CBWD3-208ENST00000612050 MTCL1Q9Y4B5 1905 aaKnown RBP13.38□□□□□ -0.27
CBWD3-208ENST00000612050 PLXNA3P51805 1871 aa13.37□□□□□ -0.27
CBWD3-208ENST00000612050 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.37□□□□□ -0.27
CBWD3-208ENST00000612050 PRPF6O94906 941 aaKnown RBP13.37□□□□□ -0.27
CBWD3-208ENST00000612050 KIF20AO95235 890 aa13.37□□□□□ -0.27
CBWD3-208ENST00000612050 HNRNPA1P09651 372 aaKnown RBP eCLIP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms