RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 TXLNBQ8N3L3 684 aa13.24□□□□□ -0.29
CBWD1-220ENST00000612045 OLIG1Q8TAK6 271 aa13.24□□□□□ -0.29
CBWD1-220ENST00000612045 SH3TC2Q8TF17 1288 aa13.24□□□□□ -0.29
CBWD1-220ENST00000612045 GLT1D1Q96MS3 346 aa13.24□□□□□ -0.29
CBWD1-220ENST00000612045 WDR24Q96S15 920 aa13.24□□□□□ -0.29
CBWD1-220ENST00000612045 TSEN34Q9BSV6 310 aaKnown RBP13.24□□□□□ -0.29
CBWD1-220ENST00000612045 CCDC94Q9BW85 323 aaPredicted RBP13.24□□□□□ -0.29
CBWD1-220ENST00000612045 IMPG2Q9BZV3 1241 aa13.24□□□□□ -0.29
CBWD1-220ENST00000612045 LUC7LQ9NQ29 371 aaKnown RBP13.24□□□□□ -0.29
CBWD1-220ENST00000612045 MYO1AQ9UBC5 1043 aa13.24□□□□□ -0.29
CBWD1-220ENST00000612045 NOC2LQ9Y3T9 749 aaKnown RBP13.24□□□□□ -0.29
CBWD1-220ENST00000612045 NUB1Q9Y5A7 615 aa13.24□□□□□ -0.29
CBWD1-220ENST00000612045 DUSP10Q9Y6W6 482 aa13.24□□□□□ -0.29
CBWD1-220ENST00000612045 DDX3XO00571 662 aaKnown RBP eCLIP13.23□□□□□ -0.29
CBWD1-220ENST00000612045 PJA2O43164 708 aa13.23□□□□□ -0.29
CBWD1-220ENST00000612045 CYP26A1O43174 497 aa13.23□□□□□ -0.29
CBWD1-220ENST00000612045 CHRNA1P02708 482 aa13.23□□□□□ -0.29
CBWD1-220ENST00000612045 CTSHP09668 335 aa13.23□□□□□ -0.29
CBWD1-220ENST00000612045 PTPN11Q06124 597 aaPredicted RBP13.23□□□□□ -0.29
CBWD1-220ENST00000612045 TRPC3Q13507 836 aa13.23□□□□□ -0.29
CBWD1-220ENST00000612045 CUL2Q13617 745 aa13.23□□□□□ -0.29
CBWD1-220ENST00000612045 SGSM1Q2NKQ1 1148 aa13.23□□□□□ -0.29
CBWD1-220ENST00000612045 C10orf76Q5T2E6 689 aa13.23□□□□□ -0.29
CBWD1-220ENST00000612045 SLC30A5Q8TAD4 765 aa13.23□□□□□ -0.29
CBWD1-220ENST00000612045 DHX38Q92620 1227 aaKnown RBP13.23□□□□□ -0.29
CBWD1-220ENST00000612045 ARID3AQ99856 593 aa13.23□□□□□ -0.29
CBWD1-220ENST00000612045 TRIM6Q9C030 488 aaPredicted RBP13.23□□□□□ -0.29
CBWD1-220ENST00000612045 SENP6Q9GZR1 1112 aaPredicted RBP13.23□□□□□ -0.29
CBWD1-220ENST00000612045 SNTG2Q9NY99 539 aa13.23□□□□□ -0.29
CBWD1-220ENST00000612045 NAGPAQ9UK23 515 aa13.23□□□□□ -0.29
CBWD1-220ENST00000612045 NENFQ9UMX5 172 aa13.23□□□□□ -0.29
CBWD1-220ENST00000612045 C2CD2Q9Y426 696 aa13.23□□□□□ -0.29
CBWD1-220ENST00000612045 SGPL1O95470 568 aa13.23□□□□□ -0.29
CBWD1-220ENST00000612045 TBXAS1P24557 533 aaPredicted RBP13.23□□□□□ -0.29
CBWD1-220ENST00000612045 THPOP40225 353 aa13.23□□□□□ -0.29
CBWD1-220ENST00000612045 MYL6P60660 151 aa13.23□□□□□ -0.29
CBWD1-220ENST00000612045 MGAT3Q09327 533 aa13.23□□□□□ -0.29
CBWD1-220ENST00000612045 TMEM132DQ14C87 1099 aa13.23□□□□□ -0.29
CBWD1-220ENST00000612045 NAB2Q15742 525 aa13.23□□□□□ -0.29
CBWD1-220ENST00000612045 ZNF569Q5MCW4 686 aa13.23□□□□□ -0.29
CBWD1-220ENST00000612045 ALKBH5Q6P6C2 394 aaKnown RBP13.23□□□□□ -0.29
CBWD1-220ENST00000612045 SLC47A2Q86VL8 602 aa13.23□□□□□ -0.29
CBWD1-220ENST00000612045 GLYCTKQ8IVS8 523 aa13.23□□□□□ -0.29
CBWD1-220ENST00000612045 CD302Q8IX05 232 aa13.23□□□□□ -0.29
CBWD1-220ENST00000612045 C1orf127Q8N9H9 656 aa13.23□□□□□ -0.29
CBWD1-220ENST00000612045 ARRDC4Q8NCT1 418 aa13.23□□□□□ -0.29
CBWD1-220ENST00000612045 LNX1Q8TBB1 728 aaPredicted RBP13.23□□□□□ -0.29
CBWD1-220ENST00000612045 SLC20A1Q8WUM9 679 aa13.23□□□□□ -0.29
CBWD1-220ENST00000612045 AGPAT1Q99943 283 aa13.23□□□□□ -0.29
CBWD1-220ENST00000612045 PLEKHA5Q9HAU0 1116 aa13.23□□□□□ -0.29
CBWD1-220ENST00000612045 TRMT13Q9NUP7 481 aaKnown RBP13.23□□□□□ -0.29
CBWD1-220ENST00000612045 UMODL1Q5DID0 1318 aa13.22□□□□□ -0.29
CBWD1-220ENST00000612045 CITO14578 2027 aa13.22□□□□□ -0.29
CBWD1-220ENST00000612045 RPS6KA5O75582 802 aa13.22□□□□□ -0.29
CBWD1-220ENST00000612045 CLSTN1O94985 981 aa13.22□□□□□ -0.29
CBWD1-220ENST00000612045 KRT5P13647 590 aa13.22□□□□□ -0.29
CBWD1-220ENST00000612045 CASQ1P31415 396 aa13.22□□□□□ -0.29
CBWD1-220ENST00000612045 PTK7Q13308 1070 aa13.22□□□□□ -0.29
CBWD1-220ENST00000612045 UBXN11Q5T124 520 aa13.22□□□□□ -0.29
CBWD1-220ENST00000612045 NT5DC4Q86YG4 428 aa13.22□□□□□ -0.29
CBWD1-220ENST00000612045 EPS8L1Q8TE68 723 aa13.22□□□□□ -0.29
CBWD1-220ENST00000612045 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.22□□□□□ -0.29
CBWD1-220ENST00000612045 XYLT2Q9H1B5 865 aa13.22□□□□□ -0.29
CBWD1-220ENST00000612045 NXF3Q9H4D5 531 aaKnown RBP13.22□□□□□ -0.29
CBWD1-220ENST00000612045 ACP6Q9NPH0 428 aa13.22□□□□□ -0.29
CBWD1-220ENST00000612045 SIX4Q9UIU6 781 aa13.22□□□□□ -0.29
CBWD1-220ENST00000612045 ST3GAL5Q9UNP4 418 aa13.22□□□□□ -0.29
CBWD1-220ENST00000612045 NOD1Q9Y239 953 aa13.22□□□□□ -0.29
CBWD1-220ENST00000612045 PTPN22Q9Y2R2 807 aa13.22□□□□□ -0.29
CBWD1-220ENST00000612045 HES2Q9Y543 173 aa13.22□□□□□ -0.29
CBWD1-220ENST00000612045 FRMPD3Q5JV73 1810 aa13.21□□□□□ -0.29
CBWD1-220ENST00000612045 A0A1W2PQ45 241 aaPredicted RBP13.21□□□□□ -0.29
CBWD1-220ENST00000612045 A0A1W2PQY0 241 aa13.21□□□□□ -0.29
CBWD1-220ENST00000612045 MACROD2A1Z1Q3 448 aa13.21□□□□□ -0.29
CBWD1-220ENST00000612045 KRT19P08727 400 aa13.21□□□□□ -0.29
CBWD1-220ENST00000612045 CYP11B1P15538 503 aa13.21□□□□□ -0.29
CBWD1-220ENST00000612045 ACO1P21399 889 aaKnown RBP13.21□□□□□ -0.29
CBWD1-220ENST00000612045 TNFAIP3P21580 790 aa13.21□□□□□ -0.29
CBWD1-220ENST00000612045 YARSP54577 528 aaKnown RBP13.21□□□□□ -0.29
CBWD1-220ENST00000612045 ZNF699Q32M78 642 aa13.21□□□□□ -0.29
CBWD1-220ENST00000612045 NOP9Q86U38 636 aaKnown RBP13.21□□□□□ -0.29
CBWD1-220ENST00000612045 SLC35F6Q8N357 371 aa13.21□□□□□ -0.29
CBWD1-220ENST00000612045 CXorf38Q8TB03 319 aa13.21□□□□□ -0.29
CBWD1-220ENST00000612045 U2AF1L4Q8WU68 220 aaKnown RBP13.21□□□□□ -0.29
CBWD1-220ENST00000612045 SECISBP2LQ93073 1101 aaKnown RBP13.21□□□□□ -0.29
CBWD1-220ENST00000612045 SNX27Q96L92 541 aa13.21□□□□□ -0.29
CBWD1-220ENST00000612045 PACSIN1Q9BY11 444 aa13.21□□□□□ -0.29
CBWD1-220ENST00000612045 NOCTQ9UK39 431 aaKnown RBP13.21□□□□□ -0.29
CBWD1-220ENST00000612045 ITGB3P05106 788 aa13.2□□□□□ -0.3
CBWD1-220ENST00000612045 HSPA6P17066 643 aa13.2□□□□□ -0.3
CBWD1-220ENST00000612045 PDE6CP51160 858 aa13.2□□□□□ -0.3
CBWD1-220ENST00000612045 TWF2Q6IBS0 349 aaKnown RBP13.2□□□□□ -0.3
CBWD1-220ENST00000612045 ALKAL1Q6UXT8 129 aa13.2□□□□□ -0.3
CBWD1-220ENST00000612045 RPUSD2Q8IZ73 545 aaKnown RBP13.2□□□□□ -0.3
CBWD1-220ENST00000612045 TMEM130Q8N3G9 435 aa13.2□□□□□ -0.3
CBWD1-220ENST00000612045 SLC43A3Q8NBI5 491 aa13.2□□□□□ -0.3
CBWD1-220ENST00000612045 TAF4BQ92750 862 aa13.2□□□□□ -0.3
CBWD1-220ENST00000612045 KIF12Q96FN5 646 aa13.2□□□□□ -0.3
CBWD1-220ENST00000612045 NIF3L1Q9GZT8 377 aa13.2□□□□□ -0.3
CBWD1-220ENST00000612045 UNC93B1Q9H1C4 597 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms