RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 OLFML3Q9NRN5 406 aa9.46□□□□□ -0.9
SNCA-212ENST00000611107 CNTN3Q9P232 1028 aa9.46□□□□□ -0.9
SNCA-212ENST00000611107 LARSQ9P2J5 1176 aaKnown RBP9.46□□□□□ -0.9
SNCA-212ENST00000611107 ZDBF2Q9HCK1 2354 aa9.46□□□□□ -0.9
SNCA-212ENST00000611107 ZMYM2Q9UBW7 1377 aa9.46□□□□□ -0.9
SNCA-212ENST00000611107 COL4A3Q01955 1670 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 TTC26A0AVF1 554 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 TGM5O43548 720 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 TRAK2O60296 914 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 TADA2AO75478 443 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 TOM1L1O75674 476 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 URODP06132 367 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 KCNE1P15382 129 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 GAP43P17677 238 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 FGFR3P22607 806 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 CDR1P51861 262 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 UBE2HP62256 183 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 GTF2BQ00403 316 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 NOLC1Q14978 699 aaKnown RBP eCLIP9.45□□□□□ -0.9
SNCA-212ENST00000611107 ZBTB6Q15916 424 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 ZPBP2Q6X784 338 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 UNC13DQ70J99 1090 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 ZNF720Q7Z2F6 126 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 CEP57Q86XR8 500 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 MAP4K3Q8IVH8 894 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 RSPH1Q8WYR4 309 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 CASP10Q92851 521 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 PPP2R3CQ969Q6 453 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 DDX27Q96GQ7 796 aaKnown RBP9.45□□□□□ -0.9
SNCA-212ENST00000611107 ACAP3Q96P50 834 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 GBP4Q96PP9 640 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 TCHPQ9BT92 498 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 PHF7Q9BWX1 381 aaPredicted RBP9.45□□□□□ -0.9
SNCA-212ENST00000611107 ADAM7Q9H2U9 754 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 ST6GALNAC4Q9H4F1 302 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 MAN1C1Q9NR34 630 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 MRPL17Q9NRX2 175 aaKnown RBP9.45□□□□□ -0.9
SNCA-212ENST00000611107 LMBRD1Q9NUN5 540 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 PANK4Q9NVE7 773 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 SEL1LQ9UBV2 794 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 PRKAG3Q9UGI9 489 aa9.45□□□□□ -0.9
SNCA-212ENST00000611107 A0A0B4J269 797 aa9.44□□□□□ -0.9
SNCA-212ENST00000611107 TMEM189-UBE2V1I3L0A0 370 aa9.44□□□□□ -0.9
SNCA-212ENST00000611107 PODXLO00592 558 aa9.44□□□□□ -0.9
SNCA-212ENST00000611107 SPTLC1O15269 473 aa9.44□□□□□ -0.9
SNCA-212ENST00000611107 PRPF40AO75400 957 aaKnown RBP9.44□□□□□ -0.9
SNCA-212ENST00000611107 B3GAT3O94766 335 aa9.44□□□□□ -0.9
SNCA-212ENST00000611107 VNN2O95498 520 aa9.44□□□□□ -0.9
SNCA-212ENST00000611107 ASGR2P07307 311 aa9.44□□□□□ -0.9
SNCA-212ENST00000611107 ADRB2P07550 413 aa9.44□□□□□ -0.9
SNCA-212ENST00000611107 ACOT2P49753 483 aa9.44□□□□□ -0.9
SNCA-212ENST00000611107 SMTNP53814 917 aa9.44□□□□□ -0.9
SNCA-212ENST00000611107 NTHL1P78549 312 aa9.44□□□□□ -0.9
SNCA-212ENST00000611107 AMPD3Q01432 767 aa9.44□□□□□ -0.9
SNCA-212ENST00000611107 DPYDQ12882 1025 aa9.44□□□□□ -0.9
SNCA-212ENST00000611107 USP41Q3LFD5 358 aa9.44□□□□□ -0.9
SNCA-212ENST00000611107 HACE1Q8IYU2 909 aa9.44□□□□□ -0.9
SNCA-212ENST00000611107 PIK3R5Q8WYR1 880 aa9.44□□□□□ -0.9
SNCA-212ENST00000611107 CCDC94Q9BW85 323 aaPredicted RBP9.44□□□□□ -0.9
SNCA-212ENST00000611107 LRRC27Q9C0I9 530 aa9.44□□□□□ -0.9
SNCA-212ENST00000611107 STYXL1Q9Y6J8 313 aa9.44□□□□□ -0.9
SNCA-212ENST00000611107 PTPRDP23468 1912 aa9.44□□□□□ -0.9
SNCA-212ENST00000611107 MYH10P35580 1976 aa9.44□□□□□ -0.9
SNCA-212ENST00000611107 H0YCG3 227 aa9.43□□□□□ -0.9
SNCA-212ENST00000611107 OGTO15294 1046 aa9.43□□□□□ -0.9
SNCA-212ENST00000611107 CLDN3O15551 220 aa9.43□□□□□ -0.9
SNCA-212ENST00000611107 TBC1D4O60343 1298 aa9.43□□□□□ -0.9
SNCA-212ENST00000611107 PRPF6O94906 941 aaKnown RBP9.43□□□□□ -0.9
SNCA-212ENST00000611107 MYL1P05976 194 aa9.43□□□□□ -0.9
SNCA-212ENST00000611107 NFICP08651 508 aa9.43□□□□□ -0.9
SNCA-212ENST00000611107 LIG4P49917 911 aa9.43□□□□□ -0.9
SNCA-212ENST00000611107 STRN3Q13033 797 aa9.43□□□□□ -0.9
SNCA-212ENST00000611107 PNOCQ13519 176 aa9.43□□□□□ -0.9
SNCA-212ENST00000611107 POSTNQ15063 836 aa9.43□□□□□ -0.9
SNCA-212ENST00000611107 PSMD5Q16401 504 aa9.43□□□□□ -0.9
SNCA-212ENST00000611107 HERC4Q5GLZ8 1057 aaPredicted RBP9.43□□□□□ -0.9
SNCA-212ENST00000611107 FAM26FQ5R3K3 315 aa9.43□□□□□ -0.9
SNCA-212ENST00000611107 JADE1Q6IE81 842 aa9.43□□□□□ -0.9
SNCA-212ENST00000611107 KIAA1841Q6NSI8 718 aa9.43□□□□□ -0.9
SNCA-212ENST00000611107 DCLRE1AQ6PJP8 1040 aa9.43□□□□□ -0.9
SNCA-212ENST00000611107 EPM2AIP1Q7L775 607 aaPredicted RBP9.43□□□□□ -0.9
SNCA-212ENST00000611107 GPR149Q86SP6 731 aa9.43□□□□□ -0.9
SNCA-212ENST00000611107 CCDC65Q8IXS2 484 aa9.43□□□□□ -0.9
SNCA-212ENST00000611107 EFCAB13Q8IY85 973 aa9.43□□□□□ -0.9
SNCA-212ENST00000611107 KIAA0895Q8NCT3 520 aa9.43□□□□□ -0.9
SNCA-212ENST00000611107 ERCC4Q92889 916 aaPredicted RBP9.43□□□□□ -0.9
SNCA-212ENST00000611107 HVCN1Q96D96 273 aa9.43□□□□□ -0.9
SNCA-212ENST00000611107 SAAL1Q96ER3 474 aa9.43□□□□□ -0.9
SNCA-212ENST00000611107 BICD1Q96G01 975 aa9.43□□□□□ -0.9
SNCA-212ENST00000611107 TIGD1Q96MW7 591 aa9.43□□□□□ -0.9
SNCA-212ENST00000611107 TTPALQ9BTX7 342 aa9.43□□□□□ -0.9
SNCA-212ENST00000611107 MRPL44Q9H9J2 332 aaKnown RBP9.43□□□□□ -0.9
SNCA-212ENST00000611107 FNIP2Q9P278 1114 aa9.43□□□□□ -0.9
SNCA-212ENST00000611107 CPSF3Q9UKF6 684 aaKnown RBP9.43□□□□□ -0.9
SNCA-212ENST00000611107 TIMM13Q9Y5L4 95 aaPredicted RBP9.43□□□□□ -0.9
SNCA-212ENST00000611107 KMT2EQ8IZD2 1858 aa9.42□□□□□ -0.9
SNCA-212ENST00000611107 SF3B1O75533 1304 aaKnown RBP eCLIP9.42□□□□□ -0.93e-6■■■■■ 137.9
SNCA-212ENST00000611107 UBE4BO95155 1302 aa9.42□□□□□ -0.9
SNCA-212ENST00000611107 CCDC195A0A1B0GUA6 201 aa9.42□□□□□ -0.9
SNCA-212ENST00000611107 PVALEFA0A1B0GWK0 134 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms