RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 STX18Q9P2W9 335 aaKnown RBP12.7□□□□□ -0.38
TP53-220ENST00000610623 ZNF212Q9UDV6 495 aa12.7□□□□□ -0.38
TP53-220ENST00000610623 CCDC22O60826 627 aa12.69□□□□□ -0.38
TP53-220ENST00000610623 ASMTLO95671 621 aa12.69□□□□□ -0.38
TP53-220ENST00000610623 ECEL1O95672 775 aa12.69□□□□□ -0.38
TP53-220ENST00000610623 GOLGA8HP0CJ92 632 aa12.69□□□□□ -0.38
TP53-220ENST00000610623 MUTP22033 750 aa12.69□□□□□ -0.38
TP53-220ENST00000610623 SESN3P58005 492 aa12.69□□□□□ -0.38
TP53-220ENST00000610623 CAV1Q03135 178 aa12.69□□□□□ -0.38
TP53-220ENST00000610623 USP4Q13107 963 aa12.69□□□□□ -0.38
TP53-220ENST00000610623 NR1H3Q13133 447 aa12.69□□□□□ -0.38
TP53-220ENST00000610623 CNPY1Q3B7I2 92 aa12.69□□□□□ -0.38
TP53-220ENST00000610623 RHBDF2Q6PJF5 856 aa12.69□□□□□ -0.38
TP53-220ENST00000610623 CCDC125Q86Z20 511 aa12.69□□□□□ -0.38
TP53-220ENST00000610623 CCNJLQ8IV13 435 aa12.69□□□□□ -0.38
TP53-220ENST00000610623 ZDHHC14Q8IZN3 488 aa12.69□□□□□ -0.38
TP53-220ENST00000610623 STKLD1Q8NE28 680 aa12.69□□□□□ -0.38
TP53-220ENST00000610623 ZNF398Q8TD17 642 aa12.69□□□□□ -0.38
TP53-220ENST00000610623 C10orf82Q8WW14 230 aa12.69□□□□□ -0.38
TP53-220ENST00000610623 NRG4Q8WWG1 115 aa12.69□□□□□ -0.38
TP53-220ENST00000610623 ZDHHC15Q96MV8 337 aa12.69□□□□□ -0.38
TP53-220ENST00000610623 ZNF184Q99676 751 aaPredicted RBP12.69□□□□□ -0.38
TP53-220ENST00000610623 SYT11Q9BT88 431 aa12.69□□□□□ -0.38
TP53-220ENST00000610623 DHX36Q9H2U1 1008 aaKnown RBP12.69□□□□□ -0.38
TP53-220ENST00000610623 UBN1Q9NPG3 1134 aa12.69□□□□□ -0.38
TP53-220ENST00000610623 DDX4Q9NQI0 724 aaKnown RBP12.69□□□□□ -0.38
TP53-220ENST00000610623 GCNT4Q9P109 453 aa12.69□□□□□ -0.38
TP53-220ENST00000610623 AJAP1Q9UKB5 411 aaPredicted RBP12.69□□□□□ -0.38
TP53-220ENST00000610623 NAALADL1Q9UQQ1 740 aa12.69□□□□□ -0.38
TP53-220ENST00000610623 SLX4Q8IY92 1834 aa12.69□□□□□ -0.38
TP53-220ENST00000610623 SLC37A4O43826 429 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 EDF1O60869 148 aaKnown RBP12.68□□□□□ -0.38
TP53-220ENST00000610623 ZWINTO95229 277 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 CBX6O95503 412 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 SNHG28P0DPA3 235 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 CRKP46108 304 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 WDR4P57081 412 aaKnown RBP12.68□□□□□ -0.38
TP53-220ENST00000610623 MCL1Q07820 350 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 MYBPC3Q14896 1274 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 ECM1Q16610 540 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 CC2D2BQ6DHV5 1058 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 APOBEC3HQ6NTF7 200 aaKnown RBP12.68□□□□□ -0.38
TP53-220ENST00000610623 AADACL2Q6P093 401 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 USP17L2Q6R6M4 530 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 SRRM1Q8IYB3 904 aaKnown RBP12.68□□□□□ -0.38
TP53-220ENST00000610623 LZICQ8WZA0 190 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 ARHGEF26Q96DR7 871 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 CCDC17Q96LX7 622 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 STK33Q9BYT3 514 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 MIS12Q9H081 205 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 LRRC19Q9H756 370 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 SYNCQ9H7C4 482 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 TYW1Q9NV66 732 aaKnown RBP12.68□□□□□ -0.38
TP53-220ENST00000610623 IL1RAPL1Q9NZN1 696 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 BIN2Q9UBW5 565 aaPredicted RBP12.68□□□□□ -0.38
TP53-220ENST00000610623 ZFP69BQ9UJL9 534 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 GMEB1Q9Y692 573 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 C2CD2LO14523 706 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 CAPN9O14815 690 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 SLC16A3O15427 465 aaKnown RBP12.68□□□□□ -0.38
TP53-220ENST00000610623 SLC26A4O43511 780 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 CALUO43852 315 aaPredicted RBP12.68□□□□□ -0.38
TP53-220ENST00000610623 AKR1B1P15121 316 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 SCNN1DP51172 638 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 DNAJC3Q13217 504 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 CTTNQ14247 550 aaKnown RBP12.68□□□□□ -0.38
TP53-220ENST00000610623 SPARCL1Q14515 664 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 STAT4Q14765 748 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 TAF1BQ53T94 588 aaPredicted RBP12.68□□□□□ -0.38
TP53-220ENST00000610623 DCAF17Q5H9S7 520 aaPredicted RBP12.68□□□□□ -0.38
TP53-220ENST00000610623 PPP1R18Q6NYC8 613 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 CYP4X1Q8N118 509 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 SMC1BQ8NDV3 1235 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 CENPKQ9BS16 269 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 THAP2Q9H0W7 228 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 WNT8AQ9H1J5 351 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 DNAAF2Q9NVR5 837 aaKnown RBP12.68□□□□□ -0.38
TP53-220ENST00000610623 COG5Q9UP83 839 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 PTPN22Q9Y2R2 807 aa12.68□□□□□ -0.38
TP53-220ENST00000610623 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.68□□□□□ -0.38
TP53-220ENST00000610623 USP17L5A8MUK1 530 aa12.67□□□□□ -0.38
TP53-220ENST00000610623 PDXKO00764 312 aa12.67□□□□□ -0.38
TP53-220ENST00000610623 TP73O15350 636 aa12.67□□□□□ -0.38
TP53-220ENST00000610623 THAP12O43422 761 aa12.67□□□□□ -0.38
TP53-220ENST00000610623 PSMG1O95456 288 aa12.67□□□□□ -0.38
TP53-220ENST00000610623 TNFAIP3P21580 790 aa12.67□□□□□ -0.38
TP53-220ENST00000610623 RPL13P26373 211 aaKnown RBP12.67□□□□□ -0.38
TP53-220ENST00000610623 LSAMPQ13449 338 aa12.67□□□□□ -0.38
TP53-220ENST00000610623 PDK4Q16654 411 aa12.67□□□□□ -0.38
TP53-220ENST00000610623 KNOP1Q1ED39 458 aaKnown RBP12.67□□□□□ -0.38
TP53-220ENST00000610623 DAB2IPQ5VWQ8 1189 aa12.67□□□□□ -0.38
TP53-220ENST00000610623 SLC13A5Q86YT5 568 aaPredicted RBP12.67□□□□□ -0.38
TP53-220ENST00000610623 SLC35C1Q96A29 364 aa12.67□□□□□ -0.38
TP53-220ENST00000610623 BTBD10Q9BSF8 475 aa12.67□□□□□ -0.38
TP53-220ENST00000610623 CADM1Q9BY67 442 aaKnown RBP12.67□□□□□ -0.38
TP53-220ENST00000610623 MMADHCQ9H3L0 296 aaPredicted RBP12.67□□□□□ -0.38
TP53-220ENST00000610623 G3BP2Q9UN86 482 aaKnown RBP12.67□□□□□ -0.38
TP53-220ENST00000610623 SIPA1L1O43166 1804 aa12.67□□□□□ -0.38
TP53-220ENST00000610623 C19orf67A6NJJ6 358 aa12.67□□□□□ -0.38
TP53-220ENST00000610623 RASA4BC9J798 803 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms