RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 OR6B2Q6IFH4 312 aa7.28□□□□□ -1.24
SYNPO2-206ENST00000610556 CNPY4Q8N129 248 aa7.28□□□□□ -1.24
SYNPO2-206ENST00000610556 EPS8L1Q8TE68 723 aa7.28□□□□□ -1.24
SYNPO2-206ENST00000610556 RPAP3Q9H6T3 665 aaPredicted RBP7.28□□□□□ -1.24
SYNPO2-206ENST00000610556 ZFP69BQ9UJL9 534 aa7.28□□□□□ -1.24
SYNPO2-206ENST00000610556 POLRMTO00411 1230 aaKnown RBP7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 NR3C2P08235 984 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 ESRRAP11474 423 aaPredicted RBP7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 SFNP31947 248 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 RAD23BP54727 409 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 ARL4CP56559 192 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 OVGP1Q12889 678 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 PPP6R3Q5H9R7 873 aaPredicted RBP7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 DUPD1Q68J44 220 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 CPNE8Q86YQ8 564 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 PPM1NQ8N819 430 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 C7orf31Q8N865 590 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 STAMBPL1Q96FJ0 436 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 NUDCD1Q96RS6 583 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 GLIS2Q9BZE0 524 aaPredicted RBP7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 SEPT10Q9P0V9 454 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 SLC9A2Q9UBY0 812 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 COG5Q9UP83 839 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 TTLL3Q9Y4R7 772 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 DUOX1Q9NRD9 1551 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 CCDC195A0A1B0GUA6 201 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 ANKRD63C9JTQ0 380 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 GYG2O15488 501 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 PSMD10O75832 226 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 GZMAP12544 262 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 SAT1P21673 171 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 TARSP26639 723 aaKnown RBP7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 CDC25CP30307 473 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 PSMC1P62191 440 aaKnown RBP7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 HIF1AQ16665 826 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 SUGP1Q8IWZ8 645 aaKnown RBP7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 ARHGAP24Q8N264 748 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 TTLL6Q8N841 843 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 GMCL1P1Q8NEA9 526 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 CCHCR1Q8TD31 782 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 NSUN6Q8TEA1 469 aaKnown RBP7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 SPDL1Q96EA4 605 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 HEXIM2Q96MH2 286 aaKnown RBP7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 CYTH2Q99418 400 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 MPHOSPH6Q99547 160 aaKnown RBP7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 SLC13A1Q9BZW2 595 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 ROPN1BQ9BZX4 212 aaPredicted RBP7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 YIPF3Q9GZM5 350 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 ROPN1Q9HAT0 212 aaPredicted RBP7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 IP6K2Q9UHH9 426 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 TMX2Q9Y320 296 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 COL16A1Q07092 1604 aaPredicted RBP7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 FRMPD4Q14CM0 1322 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 P4HA2O15460 535 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 PPFIA2O75334 1257 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 DCTN3O75935 186 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 MAP3K6O95382 1288 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 TTC4O95801 387 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 DRD4P21917 467 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 CLK2P49760 499 aaKnown RBP7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 HMGCS2P54868 508 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 NCOA4Q13772 614 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 KCNT1Q5JUK3 1230 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 ERMARDQ5T6L9 678 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 CYP4A22Q5TCH4 519 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 ENOSF1Q7L5Y1 443 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 APBB1IPQ7Z5R6 666 aaPredicted RBP7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 HIPK4Q8NE63 616 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 DTX3LQ8TDB6 740 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 FAM151AQ8WW52 585 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 ZKSCAN4Q969J2 545 aaPredicted RBP7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 TSNARE1Q96NA8 513 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 TRIM55Q9BYV6 548 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 UBN1Q9NPG3 1134 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 PARVAQ9NVD7 372 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 PPARGC1AQ9UBK2 798 aaKnown RBP7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 VAV3Q9UKW4 847 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 NAALADL1Q9UQQ1 740 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 DISP2A7MBM2 1401 aa7.27□□□□□ -1.25
SYNPO2-206ENST00000610556 UBE4BO95155 1302 aa7.26□□□□□ -1.25
SYNPO2-206ENST00000610556 DNM1LO00429 736 aa7.26□□□□□ -1.25
SYNPO2-206ENST00000610556 TOM1L1O75674 476 aa7.26□□□□□ -1.25
SYNPO2-206ENST00000610556 ANP32DO95626 131 aa7.26□□□□□ -1.25
SYNPO2-206ENST00000610556 CIITAP33076 1130 aa7.26□□□□□ -1.25
SYNPO2-206ENST00000610556 SLC1A1P43005 524 aa7.26□□□□□ -1.25
SYNPO2-206ENST00000610556 COPS2P61201 443 aa7.26□□□□□ -1.25
SYNPO2-206ENST00000610556 TMPRSS15P98073 1019 aa7.26□□□□□ -1.25
SYNPO2-206ENST00000610556 PRKCEQ02156 737 aa7.26□□□□□ -1.25
SYNPO2-206ENST00000610556 ZNF699Q32M78 642 aa7.26□□□□□ -1.25
SYNPO2-206ENST00000610556 MDH1BQ5I0G3 518 aa7.26□□□□□ -1.25
SYNPO2-206ENST00000610556 SLFN12LQ6IEE8 588 aa7.26□□□□□ -1.25
SYNPO2-206ENST00000610556 C11orf63Q6NUN7 778 aa7.26□□□□□ -1.25
SYNPO2-206ENST00000610556 C15orf52Q6ZUT6 534 aaKnown RBP7.26□□□□□ -1.25
SYNPO2-206ENST00000610556 SDCCAG8Q86SQ7 713 aaPredicted RBP7.26□□□□□ -1.25
SYNPO2-206ENST00000610556 IL31RAQ8NI17 732 aa7.26□□□□□ -1.25
SYNPO2-206ENST00000610556 PRCCQ92733 491 aaPredicted RBP7.26□□□□□ -1.25
SYNPO2-206ENST00000610556 FAF2Q96CS3 445 aa7.26□□□□□ -1.25
SYNPO2-206ENST00000610556 ATG4CQ96DT6 458 aa7.26□□□□□ -1.25
SYNPO2-206ENST00000610556 ANKRD36BP1Q96IX9 119 aa7.26□□□□□ -1.25
SYNPO2-206ENST00000610556 CDHR1Q96JP9 859 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms