RNA–Protein interactions for RNA: ENST00000608669.1

LINC00963-212, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 531 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-212ENST00000608669 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.23□□□□□ -0.29
LINC00963-212ENST00000608669 B3GAT3O94766 335 aa13.23□□□□□ -0.29
LINC00963-212ENST00000608669 SCP2P22307 547 aa13.23□□□□□ -0.29
LINC00963-212ENST00000608669 TKTP29401 623 aaKnown RBP13.23□□□□□ -0.29
LINC00963-212ENST00000608669 CYP24A1Q07973 514 aa13.23□□□□□ -0.29
LINC00963-212ENST00000608669 UPP1Q16831 310 aa13.23□□□□□ -0.29
LINC00963-212ENST00000608669 RTP2Q5QGT7 225 aa13.23□□□□□ -0.29
LINC00963-212ENST00000608669 LLGL2Q6P1M3 1020 aa13.23□□□□□ -0.29
LINC00963-212ENST00000608669 TMC7Q7Z402 723 aa13.23□□□□□ -0.29
LINC00963-212ENST00000608669 MAFAQ8NHW3 353 aaPredicted RBP13.23□□□□□ -0.29
LINC00963-212ENST00000608669 NELFBQ8WX92 580 aa13.23□□□□□ -0.29
LINC00963-212ENST00000608669 P2RX5Q93086 422 aa13.23□□□□□ -0.29
LINC00963-212ENST00000608669 MRPL38Q96DV4 380 aaKnown RBP13.23□□□□□ -0.29
LINC00963-212ENST00000608669 PLVAPQ9BX97 442 aa13.23□□□□□ -0.29
LINC00963-212ENST00000608669 ZBP1Q9H171 429 aa13.23□□□□□ -0.29
LINC00963-212ENST00000608669 ADAM28Q9UKQ2 775 aa13.23□□□□□ -0.29
LINC00963-212ENST00000608669 TIMM13Q9Y5L4 95 aaPredicted RBP13.23□□□□□ -0.29
LINC00963-212ENST00000608669 ZNF233A6NK53 670 aa13.22□□□□□ -0.29
LINC00963-212ENST00000608669 PDXKO00764 312 aa13.22□□□□□ -0.29
LINC00963-212ENST00000608669 SPTLC1O15269 473 aa13.22□□□□□ -0.29
LINC00963-212ENST00000608669 CALUO43852 315 aaPredicted RBP13.22□□□□□ -0.29
LINC00963-212ENST00000608669 TADA2AO75478 443 aa13.22□□□□□ -0.29
LINC00963-212ENST00000608669 AKAP3O75969 853 aa13.22□□□□□ -0.29
LINC00963-212ENST00000608669 CLSTN1O94985 981 aa13.22□□□□□ -0.29
LINC00963-212ENST00000608669 ITGB3P05106 788 aa13.22□□□□□ -0.29
LINC00963-212ENST00000608669 RB1P06400 928 aa13.22□□□□□ -0.29
LINC00963-212ENST00000608669 KRT19P08727 400 aa13.22□□□□□ -0.29
LINC00963-212ENST00000608669 POLR2BP30876 1174 aaKnown RBP13.22□□□□□ -0.29
LINC00963-212ENST00000608669 PPM1AP35813 382 aa13.22□□□□□ -0.29
LINC00963-212ENST00000608669 NRIP1P48552 1158 aa13.22□□□□□ -0.29
LINC00963-212ENST00000608669 CLUL1Q15846 466 aa13.22□□□□□ -0.29
LINC00963-212ENST00000608669 ZBTB6Q15916 424 aa13.22□□□□□ -0.29
LINC00963-212ENST00000608669 HSP90AA4PQ58FG1 418 aa13.22□□□□□ -0.29
LINC00963-212ENST00000608669 FAM171A1Q5VUB5 890 aa13.22□□□□□ -0.29
LINC00963-212ENST00000608669 COLEC11Q9BWP8 271 aa13.22□□□□□ -0.29
LINC00963-212ENST00000608669 APOL5Q9BWW9 433 aa13.22□□□□□ -0.29
LINC00963-212ENST00000608669 DPP3Q9NY33 737 aa13.22□□□□□ -0.29
LINC00963-212ENST00000608669 UBQLN1Q9UMX0 589 aaKnown RBP13.22□□□□□ -0.29
LINC00963-212ENST00000608669 COL6A3P12111 3177 aa13.22□□□□□ -0.29
LINC00963-212ENST00000608669 LRRIQ3A6PVS8 624 aaPredicted RBP13.21□□□□□ -0.29
LINC00963-212ENST00000608669 FSCN2O14926 492 aa13.21□□□□□ -0.29
LINC00963-212ENST00000608669 TNNI1P19237 187 aa13.21□□□□□ -0.29
LINC00963-212ENST00000608669 PLCB3Q01970 1234 aa13.21□□□□□ -0.29
LINC00963-212ENST00000608669 KRT17Q04695 432 aa13.21□□□□□ -0.29
LINC00963-212ENST00000608669 HYAL1Q12794 435 aa13.21□□□□□ -0.29
LINC00963-212ENST00000608669 PTPN14Q15678 1187 aa13.21□□□□□ -0.29
LINC00963-212ENST00000608669 TIGD5Q53EQ6 642 aa13.21□□□□□ -0.29
LINC00963-212ENST00000608669 SPATA1Q5VX52 437 aa13.21□□□□□ -0.29
LINC00963-212ENST00000608669 C9orf57Q5W0N0 161 aa13.21□□□□□ -0.29
LINC00963-212ENST00000608669 DDX53Q86TM3 631 aaKnown RBP13.21□□□□□ -0.29
LINC00963-212ENST00000608669 ELOA2Q8IYF1 753 aaPredicted RBP13.21□□□□□ -0.29
LINC00963-212ENST00000608669 C1orf127Q8N9H9 656 aa13.21□□□□□ -0.29
LINC00963-212ENST00000608669 BEST2Q8NFU1 509 aa13.21□□□□□ -0.29
LINC00963-212ENST00000608669 VN1R2Q8NFZ6 395 aa13.21□□□□□ -0.29
LINC00963-212ENST00000608669 RIN2Q8WYP3 895 aaPredicted RBP13.21□□□□□ -0.29
LINC00963-212ENST00000608669 ZNF516Q92618 1163 aa13.21□□□□□ -0.29
LINC00963-212ENST00000608669 FBXL18Q96ME1 805 aa13.21□□□□□ -0.29
LINC00963-212ENST00000608669 MED15Q96RN5 788 aa13.21□□□□□ -0.29
LINC00963-212ENST00000608669 DUSP9Q99956 384 aaKnown RBP13.21□□□□□ -0.29
LINC00963-212ENST00000608669 HERC2P3Q9BVR0 1158 aa13.21□□□□□ -0.29
LINC00963-212ENST00000608669 PLEKHA5Q9HAU0 1116 aa13.21□□□□□ -0.29
LINC00963-212ENST00000608669 SLC38A7Q9NVC3 462 aa13.21□□□□□ -0.29
LINC00963-212ENST00000608669 DMAC2Q9NW81 257 aa13.21□□□□□ -0.29
LINC00963-212ENST00000608669 SIX4Q9UIU6 781 aa13.21□□□□□ -0.29
LINC00963-212ENST00000608669 CDH22Q9UJ99 828 aa13.21□□□□□ -0.29
LINC00963-212ENST00000608669 NUB1Q9Y5A7 615 aa13.21□□□□□ -0.29
LINC00963-212ENST00000608669 PRUNE2Q8WUY3 3088 aa13.2□□□□□ -0.3
LINC00963-212ENST00000608669 ADAM12O43184 909 aa13.2□□□□□ -0.3
LINC00963-212ENST00000608669 HCRTO43612 131 aa13.2□□□□□ -0.3
LINC00963-212ENST00000608669 LRRN2O75325 713 aa13.2□□□□□ -0.3
LINC00963-212ENST00000608669 IL18RAPO95256 599 aa13.2□□□□□ -0.3
LINC00963-212ENST00000608669 CXCL14O95715 111 aa13.2□□□□□ -0.3
LINC00963-212ENST00000608669 LDHAP00338 332 aaKnown RBP13.2□□□□□ -0.3
LINC00963-212ENST00000608669 TMEM191BP0C7N4 346 aa13.2□□□□□ -0.3
LINC00963-212ENST00000608669 SPATA31D3P0C874 917 aa13.2□□□□□ -0.3
LINC00963-212ENST00000608669 CCNE1P24864 410 aa13.2□□□□□ -0.3
LINC00963-212ENST00000608669 TFF2Q03403 129 aa13.2□□□□□ -0.3
LINC00963-212ENST00000608669 DLX2Q07687 328 aaPredicted RBP13.2□□□□□ -0.3
LINC00963-212ENST00000608669 BFSP1Q12934 665 aa13.2□□□□□ -0.3
LINC00963-212ENST00000608669 PAK1Q13153 545 aa13.2□□□□□ -0.3
LINC00963-212ENST00000608669 ADAM9Q13443 819 aa13.2□□□□□ -0.3
LINC00963-212ENST00000608669 PTPROQ16827 1216 aa13.2□□□□□ -0.3
LINC00963-212ENST00000608669 DCAF17Q5H9S7 520 aaPredicted RBP13.2□□□□□ -0.3
LINC00963-212ENST00000608669 C1orf220Q5T0J3 134 aa13.2□□□□□ -0.3
LINC00963-212ENST00000608669 FAM43BQ6ZT52 329 aaPredicted RBP13.2□□□□□ -0.3
LINC00963-212ENST00000608669 SPATA31D4Q6ZUB0 917 aa13.2□□□□□ -0.3
LINC00963-212ENST00000608669 C11orf57Q6ZUT1 292 aaPredicted RBP13.2□□□□□ -0.3
LINC00963-212ENST00000608669 C12orf56Q8IXR9 622 aa13.2□□□□□ -0.3
LINC00963-212ENST00000608669 FAM186BQ8IYM0 893 aa13.2□□□□□ -0.3
LINC00963-212ENST00000608669 CGRRF1Q99675 332 aa13.2□□□□□ -0.3
LINC00963-212ENST00000608669 NSUN3Q9H649 340 aaKnown RBP13.2□□□□□ -0.3
LINC00963-212ENST00000608669 BARX2Q9UMQ3 279 aaPredicted RBP13.2□□□□□ -0.3
LINC00963-212ENST00000608669 AGAP1Q9UPQ3 857 aa13.2□□□□□ -0.3
LINC00963-212ENST00000608669 TRAF3IP3Q9Y228 551 aa13.2□□□□□ -0.3
LINC00963-212ENST00000608669 SF3B1O75533 1304 aaKnown RBP eCLIP13.19□□□□□ -0.3
LINC00963-212ENST00000608669 C2orf71A6NGG8 1288 aa13.19□□□□□ -0.3
LINC00963-212ENST00000608669 PSMA7O14818 248 aa13.19□□□□□ -0.3
LINC00963-212ENST00000608669 MBD3O95983 291 aa13.19□□□□□ -0.3
LINC00963-212ENST00000608669 SOD2P04179 222 aa13.19□□□□□ -0.3
LINC00963-212ENST00000608669 URODP06132 367 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms