RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 NEPROQ6NW34 567 aa13.31□□□□□ -0.28
CTCFL-218ENST00000608440 ALKBH5Q6P6C2 394 aaKnown RBP13.31□□□□□ -0.28
CTCFL-218ENST00000608440 RIPOR1Q6ZS17 1223 aa13.31□□□□□ -0.28
CTCFL-218ENST00000608440 ZNF571Q7Z3V5 609 aaPredicted RBP13.31□□□□□ -0.28
CTCFL-218ENST00000608440 NSL1Q96IY1 281 aa13.31□□□□□ -0.28
CTCFL-218ENST00000608440 SPATA17Q96L03 361 aa13.31□□□□□ -0.28
CTCFL-218ENST00000608440 EPB41L1Q9H4G0 881 aa13.31□□□□□ -0.28
CTCFL-218ENST00000608440 OSGEPQ9NPF4 335 aa13.31□□□□□ -0.28
CTCFL-218ENST00000608440 SAR1AQ9NR31 198 aa13.31□□□□□ -0.28
CTCFL-218ENST00000608440 RREB1Q92766 1687 aa13.31□□□□□ -0.28
CTCFL-218ENST00000608440 COL5A3P25940 1745 aaPredicted RBP13.31□□□□□ -0.28
CTCFL-218ENST00000608440 C15orf38-AP3S2A0A0A6YYH1 394 aa13.31□□□□□ -0.28
CTCFL-218ENST00000608440 H3BSA7 217 aa13.31□□□□□ -0.28
CTCFL-218ENST00000608440 ADCY6O43306 1168 aa13.31□□□□□ -0.28
CTCFL-218ENST00000608440 ZWINTO95229 277 aa13.31□□□□□ -0.28
CTCFL-218ENST00000608440 ESRRAP11474 423 aaPredicted RBP13.31□□□□□ -0.28
CTCFL-218ENST00000608440 KPNA1P52294 538 aaPredicted RBP13.31□□□□□ -0.28
CTCFL-218ENST00000608440 PFKPQ01813 784 aa13.31□□□□□ -0.28
CTCFL-218ENST00000608440 ARPINQ7Z6K5 226 aa13.31□□□□□ -0.28
CTCFL-218ENST00000608440 LRRC6Q86X45 466 aa13.31□□□□□ -0.28
CTCFL-218ENST00000608440 PDSS2Q86YH6 399 aa13.31□□□□□ -0.28
CTCFL-218ENST00000608440 PPP4R1Q8TF05 950 aa13.31□□□□□ -0.28
CTCFL-218ENST00000608440 RUNDC3BQ96NL0 473 aa13.31□□□□□ -0.28
CTCFL-218ENST00000608440 GBA3Q9H227 469 aa13.31□□□□□ -0.28
CTCFL-218ENST00000608440 FBXO6Q9NRD1 293 aaPredicted RBP13.31□□□□□ -0.28
CTCFL-218ENST00000608440 HEY2Q9UBP5 337 aa13.31□□□□□ -0.28
CTCFL-218ENST00000608440 GRID1Q9ULK0 1009 aa13.31□□□□□ -0.28
CTCFL-218ENST00000608440 NAALADL1Q9UQQ1 740 aa13.31□□□□□ -0.28
CTCFL-218ENST00000608440 STXBP5LQ9Y2K9 1186 aa13.31□□□□□ -0.28
CTCFL-218ENST00000608440 FUOMA2VDF0 154 aa13.3□□□□□ -0.28
CTCFL-218ENST00000608440 NDC80O14777 642 aa13.3□□□□□ -0.28
CTCFL-218ENST00000608440 STRNO43815 780 aa13.3□□□□□ -0.28
CTCFL-218ENST00000608440 ZBTB16Q05516 673 aa13.3□□□□□ -0.28
CTCFL-218ENST00000608440 TMEM132AQ24JP5 1023 aa13.3□□□□□ -0.28
CTCFL-218ENST00000608440 HSP90AA5PQ58FG0 334 aa13.3□□□□□ -0.28
CTCFL-218ENST00000608440 PACS1Q6VY07 963 aa13.3□□□□□ -0.28
CTCFL-218ENST00000608440 OTOAQ7RTW8 1153 aa13.3□□□□□ -0.28
CTCFL-218ENST00000608440 ZNF654Q8IZM8 581 aa13.3□□□□□ -0.28
CTCFL-218ENST00000608440 SAMD3Q8N6K7 520 aa13.3□□□□□ -0.28
CTCFL-218ENST00000608440 RFWD2Q8NHY2 731 aa13.3□□□□□ -0.28
CTCFL-218ENST00000608440 GFM2Q969S9 779 aaKnown RBP13.3□□□□□ -0.28
CTCFL-218ENST00000608440 PTCD3Q96EY7 689 aaKnown RBP13.3□□□□□ -0.28
CTCFL-218ENST00000608440 CCT7Q99832 543 aa13.3□□□□□ -0.28
CTCFL-218ENST00000608440 MRPL1Q9BYD6 325 aaKnown RBP13.3□□□□□ -0.28
CTCFL-218ENST00000608440 ADAM33Q9BZ11 813 aa13.3□□□□□ -0.28
CTCFL-218ENST00000608440 TRNAU1APQ9NX07 287 aaKnown RBP13.3□□□□□ -0.28
CTCFL-218ENST00000608440 COQ6Q9Y2Z9 468 aa13.3□□□□□ -0.28
CTCFL-218ENST00000608440 WDR91A4D1P6 747 aa13.3□□□□□ -0.28
CTCFL-218ENST00000608440 FAM47DPA6NHR8 397 aa13.3□□□□□ -0.28
CTCFL-218ENST00000608440 GNPATO15228 680 aa13.3□□□□□ -0.28
CTCFL-218ENST00000608440 LONP1P36776 959 aaKnown RBP13.3□□□□□ -0.28
CTCFL-218ENST00000608440 TRPC1P48995 793 aa13.3□□□□□ -0.28
CTCFL-218ENST00000608440 MSLNQ13421 630 aaPredicted RBP13.3□□□□□ -0.28
CTCFL-218ENST00000608440 DHX34Q14147 1143 aaKnown RBP13.3□□□□□ -0.28
CTCFL-218ENST00000608440 TMED2Q15363 201 aa13.3□□□□□ -0.28
CTCFL-218ENST00000608440 FBXL19Q6PCT2 694 aa13.3□□□□□ -0.28
CTCFL-218ENST00000608440 CLEC4GQ6UXB4 293 aa13.3□□□□□ -0.28
CTCFL-218ENST00000608440 PEX5LQ8IYB4 626 aa13.3□□□□□ -0.28
CTCFL-218ENST00000608440 SIX5Q8N196 739 aa13.3□□□□□ -0.28
CTCFL-218ENST00000608440 RNF169Q8NCN4 708 aa13.3□□□□□ -0.28
CTCFL-218ENST00000608440 HES6Q96HZ4 224 aa13.3□□□□□ -0.28
CTCFL-218ENST00000608440 POP1Q99575 1024 aaKnown RBP13.3□□□□□ -0.28
CTCFL-218ENST00000608440 KBTBD4Q9NVX7 518 aa13.3□□□□□ -0.28
CTCFL-218ENST00000608440 NAGPAQ9UK23 515 aa13.3□□□□□ -0.28
CTCFL-218ENST00000608440 LZTS1Q9Y250 596 aa13.3□□□□□ -0.28
CTCFL-218ENST00000608440 PRELID1Q9Y255 219 aa13.3□□□□□ -0.28
CTCFL-218ENST00000608440 CNTNAP4Q9C0A0 1308 aa13.3□□□□□ -0.28
CTCFL-218ENST00000608440 A8MXQ7 604 aa13.29□□□□□ -0.28
CTCFL-218ENST00000608440 BUD23O43709 281 aaKnown RBP13.29□□□□□ -0.28
CTCFL-218ENST00000608440 HNRNPCL1O60812 293 aaKnown RBP13.29□□□□□ -0.28
CTCFL-218ENST00000608440 ZBED4O75132 1171 aa13.29□□□□□ -0.28
CTCFL-218ENST00000608440 ZBED1O96006 694 aa13.29□□□□□ -0.28
CTCFL-218ENST00000608440 S100A1P23297 94 aa13.29□□□□□ -0.28
CTCFL-218ENST00000608440 KCNJ1P48048 391 aa13.29□□□□□ -0.28
CTCFL-218ENST00000608440 NSUN2Q08J23 767 aaKnown RBP eCLIP13.29□□□□□ -0.28
CTCFL-218ENST00000608440 CTTNQ14247 550 aaKnown RBP13.29□□□□□ -0.28
CTCFL-218ENST00000608440 LLGL1Q15334 1064 aa13.29□□□□□ -0.28
CTCFL-218ENST00000608440 TXNRD1Q16881 649 aa13.29□□□□□ -0.28
CTCFL-218ENST00000608440 TTC27Q6P3X3 843 aa13.29□□□□□ -0.28
CTCFL-218ENST00000608440 ZNF34Q8IZ26 560 aa13.29□□□□□ -0.28
CTCFL-218ENST00000608440 SYT2Q8N9I0 419 aaPredicted RBP13.29□□□□□ -0.28
CTCFL-218ENST00000608440 PYDC1Q8WXC3 89 aa13.29□□□□□ -0.28
CTCFL-218ENST00000608440 PANX3Q96QZ0 392 aa13.29□□□□□ -0.28
CTCFL-218ENST00000608440 TRIM9Q9C026 710 aa13.29□□□□□ -0.28
CTCFL-218ENST00000608440 PCDHGB4Q9UN71 923 aa13.29□□□□□ -0.28
CTCFL-218ENST00000608440 PCDHGB5Q9Y5G0 923 aa13.29□□□□□ -0.28
CTCFL-218ENST00000608440 SPECC1L-ADORA2AF8WAN1 911 aa13.29□□□□□ -0.28
CTCFL-218ENST00000608440 IRS4O14654 1257 aaPredicted RBP13.29□□□□□ -0.28
CTCFL-218ENST00000608440 PLEKHA8P1O95397 391 aa13.29□□□□□ -0.28
CTCFL-218ENST00000608440 RCVRNP35243 200 aa13.29□□□□□ -0.28
CTCFL-218ENST00000608440 CHKAP35790 457 aa13.29□□□□□ -0.28
CTCFL-218ENST00000608440 PTGIRP43119 386 aa13.29□□□□□ -0.28
CTCFL-218ENST00000608440 DRG2P55039 364 aaKnown RBP13.29□□□□□ -0.28
CTCFL-218ENST00000608440 VCPP55072 806 aaKnown RBP13.29□□□□□ -0.28
CTCFL-218ENST00000608440 FAAH2Q6GMR7 532 aa13.29□□□□□ -0.28
CTCFL-218ENST00000608440 UGT2A3Q6UWM9 527 aa13.29□□□□□ -0.28
CTCFL-218ENST00000608440 FBXO27Q8NI29 283 aa13.29□□□□□ -0.28
CTCFL-218ENST00000608440 PLEKHO2Q8TD55 490 aa13.29□□□□□ -0.28
CTCFL-218ENST00000608440 RBM38Q9H0Z9 239 aaKnown RBP13.29□□□□□ -0.28
CTCFL-218ENST00000608440 ARMCX1Q9P291 453 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms