RNA–Protein interactions for RNA: ENST00000606426.1

CUX2P1-201, Transcript of cut like homeobox 2 pseudogene 1, humanhuman

BASIC

Gene CUX2P1, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2P1-201ENST00000606426 GTF2H1P32780 548 aa8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 CLCNKBP51801 687 aa8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 VAMP7P51809 220 aa8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 MCCD1P59942 119 aaPredicted RBP8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 CLDN10P78369 228 aa8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 RBP5P82980 135 aa8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 TFAMQ00059 246 aaKnown RBP8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 CREMQ03060 361 aa8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 CETN1Q12798 172 aa8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 BFSP1Q12934 665 aa8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 MYO1EQ12965 1108 aa8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 UPP1Q16831 310 aa8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 DPCR1Q3MIW9 517 aa8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 CCDC40Q4G0X9 1142 aa8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 PDXDC1Q6P996 788 aa8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 FRMD5Q7Z6J6 570 aa8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 DDX53Q86TM3 631 aaKnown RBP8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 GPR65Q8IYL9 337 aa8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 LRRC52Q8N7C0 313 aa8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 ENOX1Q8TC92 643 aaKnown RBP8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 PARD3BQ8TEW8 1205 aa8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 CCDC127Q96BQ5 260 aa8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 LRCH3Q96II8 777 aa8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 GAS2L1Q99501 681 aaPredicted RBP8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 THAP9Q9H5L6 903 aa8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 PDE11AQ9HCR9 933 aa8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 NGRNQ9NPE2 291 aaKnown RBP8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 INTS13Q9NVM9 706 aa8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 DPP3Q9NY33 737 aa8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 MAGEC2Q9UBF1 373 aaPredicted RBP8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 DNAJB4Q9UDY4 337 aa8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 ARMCX3Q9UH62 379 aaPredicted RBP8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 ADAM28Q9UKQ2 775 aa8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 MTUS1Q9ULD2 1270 aa8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 PRG3Q9Y2Y8 225 aaPredicted RBP8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 NUB1Q9Y5A7 615 aa8.1□□□□□ -1.11
CUX2P1-201ENST00000606426 TRIM49BA6NDI0 452 aa8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 SMTNL1A8MU46 457 aa8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 MEFVO15553 781 aaPredicted RBP8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 N4BP1O75113 896 aaKnown RBP8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 ARHGEF15O94989 841 aa8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 SOD2P04179 222 aa8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 ITGB1P05556 798 aa8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 POU3F3P20264 500 aaPredicted RBP8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 CASP4P49662 377 aa8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 PMS1P54277 932 aaKnown RBP8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 MARSP56192 900 aaKnown RBP8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 STX17P56962 302 aa8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 TYRO3Q06418 890 aa8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 SPAG1Q07617 926 aa8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 TRPC3Q13507 836 aa8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 TIGD5Q53EQ6 642 aa8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 FUT10Q6P4F1 479 aa8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 EFCAB13Q8IY85 973 aa8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 DEFB123Q8N688 67 aa8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 ZSWIM2Q8NEG5 633 aa8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 SPPL3Q8TCT6 385 aa8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 POF1BQ8WVV4 589 aa8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 C18orf25Q96B23 403 aaPredicted RBP8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 MRPL38Q96DV4 380 aaKnown RBP8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 DUSP9Q99956 384 aaKnown RBP8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 BPIFA3Q9BQP9 254 aa8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 ANP32EQ9BTT0 268 aa8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 HERC2P3Q9BVR0 1158 aa8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 SRRTQ9BXP5 876 aaKnown RBP8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 TTYH1Q9H313 450 aaPredicted RBP8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 TLR9Q9NR96 1032 aa8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 TUBGCP4Q9UGJ1 667 aa8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 DSEQ9UL01 958 aa8.09□□□□□ -1.11
CUX2P1-201ENST00000606426 TRIOBPQ9H2D6 2365 aa8.08□□□□□ -1.12
CUX2P1-201ENST00000606426 ANO9A1A5B4 782 aa8.08□□□□□ -1.12
CUX2P1-201ENST00000606426 SYCE3A1L190 88 aa8.08□□□□□ -1.12
CUX2P1-201ENST00000606426 LRRIQ3A6PVS8 624 aaPredicted RBP8.08□□□□□ -1.12
CUX2P1-201ENST00000606426 NT5C1B-RDH14C9J2C7 533 aa8.08□□□□□ -1.12
CUX2P1-201ENST00000606426 RBAK-RBAKDNI3L0D1 243 aa8.08□□□□□ -1.12
CUX2P1-201ENST00000606426 PIRO00625 290 aa8.08□□□□□ -1.12
CUX2P1-201ENST00000606426 SYN3O14994 580 aa8.08□□□□□ -1.12
CUX2P1-201ENST00000606426 NCK2O43639 380 aa8.08□□□□□ -1.12
CUX2P1-201ENST00000606426 PHACTR2O75167 634 aa8.08□□□□□ -1.12
CUX2P1-201ENST00000606426 KIF4AO95239 1232 aa8.08□□□□□ -1.12
CUX2P1-201ENST00000606426 URODP06132 367 aa8.08□□□□□ -1.12
CUX2P1-201ENST00000606426 TPM2P07951 284 aa8.08□□□□□ -1.12
CUX2P1-201ENST00000606426 KRT19P08727 400 aa8.08□□□□□ -1.12
CUX2P1-201ENST00000606426 FAM163BP0C2L3 166 aa8.08□□□□□ -1.12
CUX2P1-201ENST00000606426 CTSAP10619 480 aa8.08□□□□□ -1.12
CUX2P1-201ENST00000606426 ATICP31939 592 aa8.08□□□□□ -1.12
CUX2P1-201ENST00000606426 PBX3P40426 434 aa8.08□□□□□ -1.12
CUX2P1-201ENST00000606426 AARSP49588 968 aaKnown RBP eCLIP8.08□□□□□ -1.12
CUX2P1-201ENST00000606426 TAF6P49848 677 aa8.08□□□□□ -1.12
CUX2P1-201ENST00000606426 SOX4Q06945 474 aaPredicted RBP8.08□□□□□ -1.12
CUX2P1-201ENST00000606426 BIRC3Q13489 604 aa8.08□□□□□ -1.12
CUX2P1-201ENST00000606426 SMC1AQ14683 1233 aaKnown RBP8.08□□□□□ -1.12
CUX2P1-201ENST00000606426 GRIN2CQ14957 1233 aa8.08□□□□□ -1.12
CUX2P1-201ENST00000606426 USP41Q3LFD5 358 aa8.08□□□□□ -1.12
CUX2P1-201ENST00000606426 ZSCAN23Q3MJ62 389 aa8.08□□□□□ -1.12
CUX2P1-201ENST00000606426 ZACNQ401N2 412 aa8.08□□□□□ -1.12
CUX2P1-201ENST00000606426 SV2CQ496J9 727 aa8.08□□□□□ -1.12
CUX2P1-201ENST00000606426 C9orf57Q5W0N0 161 aa8.08□□□□□ -1.12
CUX2P1-201ENST00000606426 KRT39Q6A163 491 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms