RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 NECTIN4Q96NY8 510 aa13.4□□□□□ -0.26
CTSA-210ENST00000606000 STRA6Q9BX79 667 aa13.4□□□□□ -0.26
CTSA-210ENST00000606000 ST6GALNAC4Q9H4F1 302 aa13.4□□□□□ -0.26
CTSA-210ENST00000606000 MRPL44Q9H9J2 332 aaKnown RBP13.4□□□□□ -0.26
CTSA-210ENST00000606000 SLC38A7Q9NVC3 462 aa13.4□□□□□ -0.26
CTSA-210ENST00000606000 ZDHHC9Q9Y397 364 aa13.4□□□□□ -0.26
CTSA-210ENST00000606000 FRMD3A2A2Y4 597 aa13.39□□□□□ -0.27
CTSA-210ENST00000606000 PPEF2O14830 753 aa13.39□□□□□ -0.27
CTSA-210ENST00000606000 GPR37L1O60883 481 aa13.39□□□□□ -0.27
CTSA-210ENST00000606000 CUTAO60888 179 aa13.39□□□□□ -0.27
CTSA-210ENST00000606000 GCNT3O95395 438 aa13.39□□□□□ -0.27
CTSA-210ENST00000606000 ASGR2P07307 311 aa13.39□□□□□ -0.27
CTSA-210ENST00000606000 NFICP08651 508 aa13.39□□□□□ -0.27
CTSA-210ENST00000606000 CASP1P29466 404 aa13.39□□□□□ -0.27
CTSA-210ENST00000606000 MCM4P33991 863 aa13.39□□□□□ -0.27
CTSA-210ENST00000606000 WNT7BP56706 349 aa13.39□□□□□ -0.27
CTSA-210ENST00000606000 PPP2R3AQ06190 1150 aa13.39□□□□□ -0.27
CTSA-210ENST00000606000 ELAVL2Q12926 359 aaKnown RBP13.39□□□□□ -0.27
CTSA-210ENST00000606000 GPR65Q8IYL9 337 aa13.39□□□□□ -0.27
CTSA-210ENST00000606000 KREMEN2Q8NCW0 462 aa13.39□□□□□ -0.27
CTSA-210ENST00000606000 FAM212AQ96EL1 285 aa13.39□□□□□ -0.27
CTSA-210ENST00000606000 PANK4Q9NVE7 773 aa13.39□□□□□ -0.27
CTSA-210ENST00000606000 MTRRQ9UBK8 725 aa13.39□□□□□ -0.27
CTSA-210ENST00000606000 FBXW11Q9UKB1 542 aa13.39□□□□□ -0.27
CTSA-210ENST00000606000 CPSF3Q9UKF6 684 aaKnown RBP13.39□□□□□ -0.27
CTSA-210ENST00000606000 PCDHA7Q9UN72 937 aa13.39□□□□□ -0.27
CTSA-210ENST00000606000 CDY1Q9Y6F8 540 aa13.39□□□□□ -0.27
CTSA-210ENST00000606000 N4BP1O75113 896 aaKnown RBP13.38□□□□□ -0.27
CTSA-210ENST00000606000 GAP43P17677 238 aa13.38□□□□□ -0.27
CTSA-210ENST00000606000 ADSSP30520 456 aa13.38□□□□□ -0.27
CTSA-210ENST00000606000 OR1D2P34982 312 aa13.38□□□□□ -0.27
CTSA-210ENST00000606000 ME1P48163 572 aa13.38□□□□□ -0.27
CTSA-210ENST00000606000 CREMQ03060 361 aa13.38□□□□□ -0.27
CTSA-210ENST00000606000 ZBTB6Q15916 424 aa13.38□□□□□ -0.27
CTSA-210ENST00000606000 VARS2Q5ST30 1063 aaKnown RBP13.38□□□□□ -0.27
CTSA-210ENST00000606000 ADALQ6DHV7 355 aa13.38□□□□□ -0.27
CTSA-210ENST00000606000 JADE1Q6IE81 842 aa13.38□□□□□ -0.27
CTSA-210ENST00000606000 C15orf39Q6ZRI6 1047 aa13.38□□□□□ -0.27
CTSA-210ENST00000606000 CCDC149Q6ZUS6 474 aa13.38□□□□□ -0.27
CTSA-210ENST00000606000 TDRD5Q8NAT2 981 aaKnown RBP13.38□□□□□ -0.27
CTSA-210ENST00000606000 CMASQ8NFW8 434 aaPredicted RBP13.38□□□□□ -0.27
CTSA-210ENST00000606000 SMG7Q92540 1137 aaKnown RBP13.38□□□□□ -0.27
CTSA-210ENST00000606000 RPF1Q9H9Y2 349 aaKnown RBP13.38□□□□□ -0.27
CTSA-210ENST00000606000 PLEKHA5Q9HAU0 1116 aa13.38□□□□□ -0.27
CTSA-210ENST00000606000 NR2E1Q9Y466 385 aa13.38□□□□□ -0.27
CTSA-210ENST00000606000 NUB1Q9Y5A7 615 aa13.38□□□□□ -0.27
CTSA-210ENST00000606000 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.37□□□□□ -0.27
CTSA-210ENST00000606000 PRR33A8MZF0 331 aa13.37□□□□□ -0.27
CTSA-210ENST00000606000 ZMYND10O75800 440 aa13.37□□□□□ -0.27
CTSA-210ENST00000606000 PRPF6O94906 941 aaKnown RBP13.37□□□□□ -0.27
CTSA-210ENST00000606000 C8AP07357 584 aa13.37□□□□□ -0.27
CTSA-210ENST00000606000 ZXDAP98168 799 aa13.37□□□□□ -0.27
CTSA-210ENST00000606000 PTPN21Q16825 1174 aa13.37□□□□□ -0.27
CTSA-210ENST00000606000 L1TD1Q5T7N2 865 aaKnown RBP13.37□□□□□ -0.27
CTSA-210ENST00000606000 CRELD2Q6UXH1 353 aaPredicted RBP13.37□□□□□ -0.27
CTSA-210ENST00000606000 HFE2Q6ZVN8 426 aa13.37□□□□□ -0.27
CTSA-210ENST00000606000 ST13P5Q8NFI4 369 aaPredicted RBP13.37□□□□□ -0.27
CTSA-210ENST00000606000 SLC7A14Q8TBB6 771 aa13.37□□□□□ -0.27
CTSA-210ENST00000606000 KCNG4Q8TDN1 519 aa13.37□□□□□ -0.27
CTSA-210ENST00000606000 EDAQ92838 391 aa13.37□□□□□ -0.27
CTSA-210ENST00000606000 HVCN1Q96D96 273 aa13.37□□□□□ -0.27
CTSA-210ENST00000606000 SAAL1Q96ER3 474 aa13.37□□□□□ -0.27
CTSA-210ENST00000606000 FAM84AQ96KN4 292 aa13.37□□□□□ -0.27
CTSA-210ENST00000606000 TRIM9Q9C026 710 aa13.37□□□□□ -0.27
CTSA-210ENST00000606000 BLZF1Q9H2G9 400 aa13.37□□□□□ -0.27
CTSA-210ENST00000606000 TNMDQ9H2S6 317 aa13.37□□□□□ -0.27
CTSA-210ENST00000606000 OLFML3Q9NRN5 406 aa13.37□□□□□ -0.27
CTSA-210ENST00000606000 KBTBD4Q9NVX7 518 aa13.37□□□□□ -0.27
CTSA-210ENST00000606000 SEL1LQ9UBV2 794 aa13.37□□□□□ -0.27
CTSA-210ENST00000606000 LIMD1Q9UGP4 676 aa13.37□□□□□ -0.27
CTSA-210ENST00000606000 AGO2Q9UKV8 859 aaKnown RBP13.37□□□□□ -0.27
CTSA-210ENST00000606000 UBQLN1Q9UMX0 589 aaKnown RBP13.37□□□□□ -0.27
CTSA-210ENST00000606000 STYXL1Q9Y6J8 313 aa13.37□□□□□ -0.27
CTSA-210ENST00000606000 CLUHO75153 1309 aa13.37□□□□□ -0.27
CTSA-210ENST00000606000 CCL16O15467 120 aa13.36□□□□□ -0.27
CTSA-210ENST00000606000 POLR2DO15514 142 aaKnown RBP13.36□□□□□ -0.27
CTSA-210ENST00000606000 TRAPPC3O43617 180 aa13.36□□□□□ -0.27
CTSA-210ENST00000606000 ADRB2P07550 413 aa13.36□□□□□ -0.27
CTSA-210ENST00000606000 SCP2P22307 547 aa13.36□□□□□ -0.27
CTSA-210ENST00000606000 LRPAP1P30533 357 aa13.36□□□□□ -0.27
CTSA-210ENST00000606000 RPL9P32969 192 aaKnown RBP13.36□□□□□ -0.27
CTSA-210ENST00000606000 ARPP19P56211 112 aa13.36□□□□□ -0.27
CTSA-210ENST00000606000 ASIC1P78348 528 aa13.36□□□□□ -0.27
CTSA-210ENST00000606000 NTHL1P78549 312 aa13.36□□□□□ -0.27
CTSA-210ENST00000606000 ROR1Q01973 937 aa13.36□□□□□ -0.27
CTSA-210ENST00000606000 RAB33AQ14088 237 aa13.36□□□□□ -0.27
CTSA-210ENST00000606000 RESP18Q5W5W9 173 aa13.36□□□□□ -0.27
CTSA-210ENST00000606000 ANKS3Q6ZW76 656 aa13.36□□□□□ -0.27
CTSA-210ENST00000606000 EFCAB13Q8IY85 973 aa13.36□□□□□ -0.27
CTSA-210ENST00000606000 GRAMD1CQ8IYS0 662 aa13.36□□□□□ -0.27
CTSA-210ENST00000606000 HDAC7Q8WUI4 952 aa13.36□□□□□ -0.27
CTSA-210ENST00000606000 POMGNT1Q8WZA1 660 aa13.36□□□□□ -0.27
CTSA-210ENST00000606000 SUSD3Q96L08 255 aa13.36□□□□□ -0.27
CTSA-210ENST00000606000 ACCSQ96QU6 501 aa13.36□□□□□ -0.27
CTSA-210ENST00000606000 PRKD2Q9BZL6 878 aa13.36□□□□□ -0.27
CTSA-210ENST00000606000 PLEKHA4Q9H4M7 779 aa13.36□□□□□ -0.27
CTSA-210ENST00000606000 PIDD1Q9HB75 910 aa13.36□□□□□ -0.27
CTSA-210ENST00000606000 WDR6Q9NNW5 1121 aaKnown RBP13.36□□□□□ -0.27
CTSA-210ENST00000606000 ZDHHC7Q9NXF8 308 aa13.36□□□□□ -0.27
CTSA-210ENST00000606000 TIMM13Q9Y5L4 95 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms