RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 NR1H3Q13133 447 aa16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 KLF1Q13351 362 aaPredicted RBP16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 PDK4Q16654 411 aa16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 LMNTD2Q8IXW0 634 aa16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 PARD3BQ8TEW8 1205 aa16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 CBX6O95503 412 aa16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 PTDSS1P48651 473 aaKnown RBP16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 TUBP50607 506 aa16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 SLC18A1P54219 525 aa16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 MRPS35P82673 323 aaKnown RBP16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 CLEC16AQ2KHT3 1053 aa16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 CYP4F22Q6NT55 531 aa16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 ZNF449Q6P9G9 518 aa16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 ZCCHC9Q8N567 271 aaKnown RBP16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 GMCL1P1Q8NEA9 526 aa16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 SUPT20HQ8NEM7 779 aa16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 HELQQ8TDG4 1101 aa16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 ZBTB10Q96DT7 871 aa16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 RBM17Q96I25 401 aaKnown RBP16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 ACCSQ96QU6 501 aa16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 RBM15Q96T37 977 aaKnown RBP eCLIP16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 LXNQ9BS40 222 aa16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 HEMGNQ9BXL5 484 aa16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 DENND2DQ9H6A0 471 aaPredicted RBP16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 TLE6Q9H808 572 aa16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 KIAA1586Q9HCI6 787 aa16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 RBBP6Q7Z6E9 1792 aaKnown RBP16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 GSTTP1A0A1W2PQM5 241 aa16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 RIMBP2O15034 1052 aa16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 AHCYL1O43865 530 aa16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 BBOX1O75936 387 aa16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 ACADSP16219 412 aa16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 ADSSP30520 456 aa16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 THEMIS2Q5TEJ8 643 aa16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 ZNF365Q70YC5 407 aa16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 TDRPQ86YL5 185 aa16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 CCDC89Q8N998 374 aa16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 FAM118BQ9BPY3 351 aa16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 TRABDQ9H4I3 376 aa16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 RPL26L1Q9UNX3 145 aaKnown RBP16.21■□□□□ 0.19
LYSMD4-211ENST00000604213 MROH7Q68CQ1 1323 aa16.21■□□□□ 0.18
LYSMD4-211ENST00000604213 EXOC1LA0A1B0GW35 172 aa16.2■□□□□ 0.18
LYSMD4-211ENST00000604213 ENTPD5O75356 428 aa16.2■□□□□ 0.18
LYSMD4-211ENST00000604213 ADRB2P07550 413 aa16.2■□□□□ 0.18
LYSMD4-211ENST00000604213 RALAP11233 206 aa16.2■□□□□ 0.18
LYSMD4-211ENST00000604213 BMP3P12645 472 aa16.2■□□□□ 0.18
LYSMD4-211ENST00000604213 KLRC2P26717 231 aa16.2■□□□□ 0.18
LYSMD4-211ENST00000604213 RASSF2P50749 326 aa16.2■□□□□ 0.18
LYSMD4-211ENST00000604213 CCNG2Q16589 344 aa16.2■□□□□ 0.18
LYSMD4-211ENST00000604213 GRIPAP1Q4V328 841 aa16.2■□□□□ 0.18
LYSMD4-211ENST00000604213 SPDYAQ5MJ70 313 aa16.2■□□□□ 0.18
LYSMD4-211ENST00000604213 PADI6Q6TGC4 694 aa16.2■□□□□ 0.18
LYSMD4-211ENST00000604213 CYLDQ9NQC7 956 aa16.2■□□□□ 0.18
LYSMD4-211ENST00000604213 CCNL1Q9UK58 526 aaPredicted RBP16.2■□□□□ 0.18
LYSMD4-211ENST00000604213 QSER1Q2KHR3 1735 aa16.2■□□□□ 0.18
LYSMD4-211ENST00000604213 SPDYE5A6NIY4 337 aa16.2■□□□□ 0.18
LYSMD4-211ENST00000604213 H0Y3Z8 333 aa16.2■□□□□ 0.18
LYSMD4-211ENST00000604213 NPTXRO95502 500 aa16.2■□□□□ 0.18
LYSMD4-211ENST00000604213 PDHA1P08559 390 aa16.2■□□□□ 0.18
LYSMD4-211ENST00000604213 MAPTP10636 758 aaKnown RBP16.2■□□□□ 0.18
LYSMD4-211ENST00000604213 RPA3P35244 121 aaPredicted RBP16.2■□□□□ 0.18
LYSMD4-211ENST00000604213 SLC1A1P43005 524 aa16.2■□□□□ 0.18
LYSMD4-211ENST00000604213 LBRQ14739 615 aaKnown RBP16.2■□□□□ 0.18
LYSMD4-211ENST00000604213 PKN2Q16513 984 aaKnown RBP16.2■□□□□ 0.18
LYSMD4-211ENST00000604213 B3GNT9Q6UX72 402 aa16.2■□□□□ 0.18
LYSMD4-211ENST00000604213 CFAP57Q96MR6 1250 aa16.2■□□□□ 0.18
LYSMD4-211ENST00000604213 SYT15Q9BQS2 421 aa16.2■□□□□ 0.18
LYSMD4-211ENST00000604213 COA1Q9GZY4 146 aa16.2■□□□□ 0.18
LYSMD4-211ENST00000604213 SMG5Q9UPR3 1016 aaKnown RBP16.2■□□□□ 0.18
LYSMD4-211ENST00000604213 ZNFX1Q9P2E3 1918 aaKnown RBP16.19■□□□□ 0.18
LYSMD4-211ENST00000604213 ADAMTSL1Q8N6G6 1762 aa16.19■□□□□ 0.18
LYSMD4-211ENST00000604213 ARP10275 920 aa16.19■□□□□ 0.18
LYSMD4-211ENST00000604213 MCCD1P59942 119 aaPredicted RBP16.19■□□□□ 0.18
LYSMD4-211ENST00000604213 UBXN2AP68543 259 aa16.19■□□□□ 0.18
LYSMD4-211ENST00000604213 PTP4A2Q12974 167 aa16.19■□□□□ 0.18
LYSMD4-211ENST00000604213 ALCAMQ13740 583 aa16.19■□□□□ 0.18
LYSMD4-211ENST00000604213 SLC1A5Q15758 541 aa16.19■□□□□ 0.18
LYSMD4-211ENST00000604213 SGSM1Q2NKQ1 1148 aa16.19■□□□□ 0.18
LYSMD4-211ENST00000604213 TAF1BQ53T94 588 aaPredicted RBP16.19■□□□□ 0.18
LYSMD4-211ENST00000604213 LRRC8CQ8TDW0 803 aa16.19■□□□□ 0.18
LYSMD4-211ENST00000604213 FBXO41Q8TF61 875 aa16.19■□□□□ 0.18
LYSMD4-211ENST00000604213 DNAJC9Q8WXX5 260 aa16.19■□□□□ 0.18
LYSMD4-211ENST00000604213 DHX38Q92620 1227 aaKnown RBP16.19■□□□□ 0.18
LYSMD4-211ENST00000604213 WDR11Q9BZH6 1224 aa16.19■□□□□ 0.18
LYSMD4-211ENST00000604213 FOXP3Q9BZS1 431 aa16.19■□□□□ 0.18
LYSMD4-211ENST00000604213 SAYSD1Q9NPB0 183 aa16.19■□□□□ 0.18
LYSMD4-211ENST00000604213 LRRD1A4D1F6 860 aa16.19■□□□□ 0.18
LYSMD4-211ENST00000604213 GOLGA8IPA6NC78 632 aa16.19■□□□□ 0.18
LYSMD4-211ENST00000604213 DDTLA6NHG4 134 aaPredicted RBP16.19■□□□□ 0.18
LYSMD4-211ENST00000604213 GOLGA8JA6NMD2 632 aa16.19■□□□□ 0.18
LYSMD4-211ENST00000604213 CALCAP01258 141 aa16.19■□□□□ 0.18
LYSMD4-211ENST00000604213 FDX1P10109 184 aa16.19■□□□□ 0.18
LYSMD4-211ENST00000604213 PTPN4P29074 926 aa16.19■□□□□ 0.18
LYSMD4-211ENST00000604213 TRAPPC3LQ5T215 181 aa16.19■□□□□ 0.18
LYSMD4-211ENST00000604213 HHIPL2Q6UWX4 724 aa16.19■□□□□ 0.18
LYSMD4-211ENST00000604213 CCDC125Q86Z20 511 aa16.19■□□□□ 0.18
LYSMD4-211ENST00000604213 MCOLN2Q8IZK6 566 aa16.19■□□□□ 0.18
LYSMD4-211ENST00000604213 LARGE2Q8N3Y3 721 aa16.19■□□□□ 0.18
LYSMD4-211ENST00000604213 KIFAP3Q92845 792 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms