RNA–Protein interactions for RNA: ENST00000603439.1

AC078880.3-201, humanhuman

BASIC

Gene AC078880.3, Length 1,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078880.3-201ENST00000603439 CCL16O15467 120 aa13.06□□□□□ -0.32
AC078880.3-201ENST00000603439 CLDN3O15551 220 aa13.06□□□□□ -0.32
AC078880.3-201ENST00000603439 FAM189A1O60320 539 aa13.06□□□□□ -0.32
AC078880.3-201ENST00000603439 PIGRP01833 764 aa13.06□□□□□ -0.32
AC078880.3-201ENST00000603439 HNRNPA1P09651 372 aaKnown RBP eCLIP13.06□□□□□ -0.32
AC078880.3-201ENST00000603439 MARCKSP29966 332 aaPredicted RBP13.06□□□□□ -0.32
AC078880.3-201ENST00000603439 HOXA9P31269 272 aa13.06□□□□□ -0.32
AC078880.3-201ENST00000603439 OR1D2P34982 312 aa13.06□□□□□ -0.32
AC078880.3-201ENST00000603439 TNFSF9P41273 254 aa13.06□□□□□ -0.32
AC078880.3-201ENST00000603439 MATR3P43243 847 aaKnown RBP eCLIP13.06□□□□□ -0.32
AC078880.3-201ENST00000603439 LIG4P49917 911 aa13.06□□□□□ -0.32
AC078880.3-201ENST00000603439 TDGQ13569 410 aa13.06□□□□□ -0.32
AC078880.3-201ENST00000603439 RAB33AQ14088 237 aa13.06□□□□□ -0.32
AC078880.3-201ENST00000603439 SLC10A6Q3KNW5 377 aa13.06□□□□□ -0.32
AC078880.3-201ENST00000603439 SPECC1Q5M775 1068 aa13.06□□□□□ -0.32
AC078880.3-201ENST00000603439 PPM1LQ5SGD2 360 aa13.06□□□□□ -0.32
AC078880.3-201ENST00000603439 VARS2Q5ST30 1063 aaKnown RBP13.06□□□□□ -0.32
AC078880.3-201ENST00000603439 ZBTB41Q5SVQ8 909 aa13.06□□□□□ -0.32
AC078880.3-201ENST00000603439 CWF19L1Q69YN2 538 aaKnown RBP13.06□□□□□ -0.32
AC078880.3-201ENST00000603439 USP49Q70CQ1 688 aa13.06□□□□□ -0.32
AC078880.3-201ENST00000603439 MYCT1Q8N699 235 aa13.06□□□□□ -0.32
AC078880.3-201ENST00000603439 EPSTI1Q96J88 318 aa13.06□□□□□ -0.32
AC078880.3-201ENST00000603439 FIZ1Q96SL8 496 aa13.06□□□□□ -0.32
AC078880.3-201ENST00000603439 CCSER1Q9C0I3 900 aa13.06□□□□□ -0.32
AC078880.3-201ENST00000603439 KCNG1Q9UIX4 513 aa13.06□□□□□ -0.32
AC078880.3-201ENST00000603439 TBX20Q9UMR3 447 aa13.06□□□□□ -0.32
AC078880.3-201ENST00000603439 MTMR6Q9Y217 621 aa13.06□□□□□ -0.32
AC078880.3-201ENST00000603439 BACE2Q9Y5Z0 518 aa13.06□□□□□ -0.32
AC078880.3-201ENST00000603439 K7ELQ4 463 aaPredicted RBP13.05□□□□□ -0.32
AC078880.3-201ENST00000603439 SYN3O14994 580 aa13.05□□□□□ -0.32
AC078880.3-201ENST00000603439 TRAPPC3O43617 180 aa13.05□□□□□ -0.32
AC078880.3-201ENST00000603439 NARSO43776 548 aaKnown RBP13.05□□□□□ -0.32
AC078880.3-201ENST00000603439 POU2F2P09086 479 aa13.05□□□□□ -0.32
AC078880.3-201ENST00000603439 MCM4P33991 863 aa13.05□□□□□ -0.32
AC078880.3-201ENST00000603439 NTHL1P78549 312 aa13.05□□□□□ -0.32
AC078880.3-201ENST00000603439 ROR1Q01973 937 aa13.05□□□□□ -0.32
AC078880.3-201ENST00000603439 PPP2R3AQ06190 1150 aa13.05□□□□□ -0.32
AC078880.3-201ENST00000603439 SPAG1Q07617 926 aa13.05□□□□□ -0.32
AC078880.3-201ENST00000603439 TCF15Q12870 199 aa13.05□□□□□ -0.32
AC078880.3-201ENST00000603439 AXDND1Q5T1B0 1012 aaPredicted RBP13.05□□□□□ -0.32
AC078880.3-201ENST00000603439 SLC39A4Q6P5W5 647 aa13.05□□□□□ -0.32
AC078880.3-201ENST00000603439 ANKS3Q6ZW76 656 aa13.05□□□□□ -0.32
AC078880.3-201ENST00000603439 GRASPQ7Z6J2 395 aaPredicted RBP13.05□□□□□ -0.32
AC078880.3-201ENST00000603439 MAP4K3Q8IVH8 894 aa13.05□□□□□ -0.32
AC078880.3-201ENST00000603439 RSAD2Q8WXG1 361 aa13.05□□□□□ -0.32
AC078880.3-201ENST00000603439 INTS4Q96HW7 963 aaKnown RBP13.05□□□□□ -0.32
AC078880.3-201ENST00000603439 ZHX3Q9H4I2 956 aa13.05□□□□□ -0.32
AC078880.3-201ENST00000603439 IGSF9Q9P2J2 1179 aa13.05□□□□□ -0.32
AC078880.3-201ENST00000603439 NUB1Q9Y5A7 615 aa13.05□□□□□ -0.32
AC078880.3-201ENST00000603439 COL4A2P08572 1712 aa13.05□□□□□ -0.32
AC078880.3-201ENST00000603439 TTC26A0AVF1 554 aa13.04□□□□□ -0.32
AC078880.3-201ENST00000603439 WDR27A2RRH5 827 aa13.04□□□□□ -0.32
AC078880.3-201ENST00000603439 TRAK2O60296 914 aa13.04□□□□□ -0.32
AC078880.3-201ENST00000603439 FSHRP23945 695 aa13.04□□□□□ -0.32
AC078880.3-201ENST00000603439 NMT1P30419 496 aaKnown RBP13.04□□□□□ -0.32
AC078880.3-201ENST00000603439 AVPR2P30518 371 aa13.04□□□□□ -0.32
AC078880.3-201ENST00000603439 RPL9P32969 192 aaKnown RBP13.04□□□□□ -0.32
AC078880.3-201ENST00000603439 PTPN5P54829 565 aa13.04□□□□□ -0.32
AC078880.3-201ENST00000603439 CEBPZQ03701 1054 aaKnown RBP13.04□□□□□ -0.32
AC078880.3-201ENST00000603439 HTR4Q13639 388 aa13.04□□□□□ -0.32
AC078880.3-201ENST00000603439 ENOX2Q16206 610 aaKnown RBP13.04□□□□□ -0.32
AC078880.3-201ENST00000603439 SLC8B1Q6J4K2 584 aa13.04□□□□□ -0.32
AC078880.3-201ENST00000603439 TMEM105Q8N8V8 129 aa13.04□□□□□ -0.32
AC078880.3-201ENST00000603439 SUSD3Q96L08 255 aa13.04□□□□□ -0.32
AC078880.3-201ENST00000603439 CLIC6Q96NY7 704 aa13.04□□□□□ -0.32
AC078880.3-201ENST00000603439 USP28Q96RU2 1077 aa13.04□□□□□ -0.32
AC078880.3-201ENST00000603439 HCFC1R1Q9NWW0 138 aa13.04□□□□□ -0.32
AC078880.3-201ENST00000603439 STK17AQ9UEE5 414 aa13.04□□□□□ -0.32
AC078880.3-201ENST00000603439 POLIQ9UNA4 740 aa13.04□□□□□ -0.32
AC078880.3-201ENST00000603439 MIA3Q5JRA6 1907 aa13.03□□□□□ -0.32
AC078880.3-201ENST00000603439 PIEZO1Q92508 2521 aa13.03□□□□□ -0.32
AC078880.3-201ENST00000603439 MYO15AQ9UKN7 3530 aa13.03□□□□□ -0.32
AC078880.3-201ENST00000603439 TISP43B9A030 160 aa13.03□□□□□ -0.32
AC078880.3-201ENST00000603439 OGTO15294 1046 aa13.03□□□□□ -0.32
AC078880.3-201ENST00000603439 XYLBO75191 536 aa13.03□□□□□ -0.32
AC078880.3-201ENST00000603439 CLTAP09496 248 aa13.03□□□□□ -0.32
AC078880.3-201ENST00000603439 LAMP2P13473 410 aa13.03□□□□□ -0.32
AC078880.3-201ENST00000603439 SCP2P22307 547 aa13.03□□□□□ -0.32
AC078880.3-201ENST00000603439 TXLNAP40222 546 aa13.03□□□□□ -0.32
AC078880.3-201ENST00000603439 GUCY2FP51841 1108 aa13.03□□□□□ -0.32
AC078880.3-201ENST00000603439 ZNF280DQ6N043 979 aa13.03□□□□□ -0.32
AC078880.3-201ENST00000603439 SFR1Q86XK3 245 aa13.03□□□□□ -0.32
AC078880.3-201ENST00000603439 ST13P5Q8NFI4 369 aaPredicted RBP13.03□□□□□ -0.32
AC078880.3-201ENST00000603439 KIF12Q96FN5 646 aa13.03□□□□□ -0.32
AC078880.3-201ENST00000603439 PRRX2Q99811 253 aa13.03□□□□□ -0.32
AC078880.3-201ENST00000603439 MSTO1Q9BUK6 570 aa13.03□□□□□ -0.32
AC078880.3-201ENST00000603439 MFSD1Q9H3U5 465 aa13.03□□□□□ -0.32
AC078880.3-201ENST00000603439 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.03□□□□□ -0.32
AC078880.3-201ENST00000603439 UBQLN1Q9UMX0 589 aaKnown RBP13.03□□□□□ -0.32
AC078880.3-201ENST00000603439 SRPRBQ9Y5M8 271 aaKnown RBP13.03□□□□□ -0.32
AC078880.3-201ENST00000603439 NUMBLQ9Y6R0 609 aa13.03□□□□□ -0.32
AC078880.3-201ENST00000603439 SCN1AP35498 2009 aa13.03□□□□□ -0.32
AC078880.3-201ENST00000603439 PATJQ8NI35 1801 aa13.02□□□□□ -0.32
AC078880.3-201ENST00000603439 ANHXE9PGG2 379 aa13.02□□□□□ -0.33
AC078880.3-201ENST00000603439 STX6O43752 255 aa13.02□□□□□ -0.33
AC078880.3-201ENST00000603439 TBC1D4O60343 1298 aa13.02□□□□□ -0.33
AC078880.3-201ENST00000603439 CFHP08603 1231 aa13.02□□□□□ -0.33
AC078880.3-201ENST00000603439 NFICP08651 508 aa13.02□□□□□ -0.33
AC078880.3-201ENST00000603439 LRPAP1P30533 357 aa13.02□□□□□ -0.33
AC078880.3-201ENST00000603439 GTF2BQ00403 316 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms