RNA–Protein interactions for RNA: ENST00000602708.1

DENND4C-208, Transcript of DENN domain containing 4C, human

TSL 4

Gene DENND4C, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND4C-208	ENST00000602708	ZNF778	Q96MU6	729 aa		5	□□□□□ -1.61
DENND4C-208	ENST00000602708	SENP6	Q9GZR1	1112 aa	Predicted RBP	5	□□□□□ -1.61
DENND4C-208	ENST00000602708	REXO4	Q9GZR2	422 aa	Known RBP	5	□□□□□ -1.61
DENND4C-208	ENST00000602708	GREM2	Q9H772	168 aa		5	□□□□□ -1.61
DENND4C-208	ENST00000602708	MOCS1	Q9NZB8	636 aa		5	□□□□□ -1.61
DENND4C-208	ENST00000602708	MTO1	Q9Y2Z2	717 aa	Known RBP	5	□□□□□ -1.61
DENND4C-208	ENST00000602708	AMY1A	P04745	511 aa		4.99	□□□□□ -1.61
DENND4C-208	ENST00000602708	CKB	P12277	381 aa		4.99	□□□□□ -1.61
DENND4C-208	ENST00000602708	IL2RB	P14784	551 aa		4.99	□□□□□ -1.61
DENND4C-208	ENST00000602708	PER3	P56645	1201 aa		4.99	□□□□□ -1.61
DENND4C-208	ENST00000602708	SESN3	P58005	492 aa		4.99	□□□□□ -1.61
DENND4C-208	ENST00000602708	DHCR24	Q15392	516 aa		4.99	□□□□□ -1.61
DENND4C-208	ENST00000602708	SEM1	Q6ZVN7	128 aa		4.99	□□□□□ -1.61
DENND4C-208	ENST00000602708	RNF180	Q86T96	592 aa		4.99	□□□□□ -1.61
DENND4C-208	ENST00000602708	ZGPAT	Q8N5A5	531 aa	Known RBP	4.99	□□□□□ -1.61
DENND4C-208	ENST00000602708	OR2I1P	Q8NGU4	316 aa		4.99	□□□□□ -1.61
DENND4C-208	ENST00000602708	ORAI2	Q96SN7	254 aa		4.99	□□□□□ -1.61
DENND4C-208	ENST00000602708	LANCL2	Q9NS86	450 aa		4.99	□□□□□ -1.61
DENND4C-208	ENST00000602708	RBM12	Q9NTZ6	932 aa	Known RBP	4.99	□□□□□ -1.61
DENND4C-208	ENST00000602708	SLC17A6	Q9P2U8	582 aa		4.99	□□□□□ -1.61
DENND4C-208	ENST00000602708	RUVBL1	Q9Y265	456 aa	Known RBP	4.99	□□□□□ -1.61
DENND4C-208	ENST00000602708	PROP1	O75360	226 aa		4.98	□□□□□ -1.61
DENND4C-208	ENST00000602708	FCER1A	P12319	257 aa		4.98	□□□□□ -1.61
DENND4C-208	ENST00000602708	MCAM	P43121	646 aa		4.98	□□□□□ -1.61
DENND4C-208	ENST00000602708	SRSF2	Q01130	221 aa	Known RBP	4.98	□□□□□ -1.61
DENND4C-208	ENST00000602708	SF3B3	Q15393	1217 aa	Known RBP	4.98	□□□□□ -1.61
DENND4C-208	ENST00000602708	MUM1L1	Q5H9M0	696 aa		4.98	□□□□□ -1.61
DENND4C-208	ENST00000602708	TOR2A	Q5JU69	321 aa		4.98	□□□□□ -1.61
DENND4C-208	ENST00000602708	KIAA0895L	Q68EN5	471 aa		4.98	□□□□□ -1.61
DENND4C-208	ENST00000602708	THNSL2	Q86YJ6	484 aa		4.98	□□□□□ -1.61
DENND4C-208	ENST00000602708	UBR7	Q8N806	425 aa		4.98	□□□□□ -1.61
DENND4C-208	ENST00000602708	DDB2	Q92466	427 aa		4.98	□□□□□ -1.61
DENND4C-208	ENST00000602708	UBXN4	Q92575	508 aa		4.98	□□□□□ -1.61
DENND4C-208	ENST00000602708	DPF1	Q92782	380 aa		4.98	□□□□□ -1.61
DENND4C-208	ENST00000602708	FATE1	Q969F0	183 aa		4.98	□□□□□ -1.61
DENND4C-208	ENST00000602708	ACE2	Q9BYF1	805 aa	Predicted RBP	4.98	□□□□□ -1.61
DENND4C-208	ENST00000602708	IFT22	Q9H7X7	185 aa		4.98	□□□□□ -1.61
DENND4C-208	ENST00000602708	MAPRE3	Q9UPY8	281 aa		4.98	□□□□□ -1.61
DENND4C-208	ENST00000602708	TCRBV7S2A1N4T	A0A589	114 aa		4.97	□□□□□ -1.61
DENND4C-208	ENST00000602708	CDHR4	A6H8M9	788 aa		4.97	□□□□□ -1.61
DENND4C-208	ENST00000602708	GOLGA8A	A7E2F4	631 aa		4.97	□□□□□ -1.61
DENND4C-208	ENST00000602708	SCAND1	P57086	179 aa		4.97	□□□□□ -1.61
DENND4C-208	ENST00000602708	SRSF4	Q08170	494 aa	Known RBP	4.97	□□□□□ -1.61
DENND4C-208	ENST00000602708	STRN3	Q13033	797 aa		4.97	□□□□□ -1.61
DENND4C-208	ENST00000602708	MTM1	Q13496	603 aa		4.97	□□□□□ -1.61
DENND4C-208	ENST00000602708	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	4.97	□□□□□ -1.61
DENND4C-208	ENST00000602708	CASKIN2	Q8WXE0	1202 aa		4.97	□□□□□ -1.61
DENND4C-208	ENST00000602708	C1QTNF7	Q9BXJ2	289 aa		4.97	□□□□□ -1.61
DENND4C-208	ENST00000602708	SLC29A3	Q9BZD2	475 aa		4.97	□□□□□ -1.61
DENND4C-208	ENST00000602708	GSTO2	Q9H4Y5	243 aa		4.97	□□□□□ -1.61
DENND4C-208	ENST00000602708	ULK1	O75385	1050 aa		4.96	□□□□□ -1.62
DENND4C-208	ENST00000602708	ERN1	O75460	977 aa	Known RBP	4.96	□□□□□ -1.62
DENND4C-208	ENST00000602708	GSPT1	P15170	499 aa	Known RBP	4.96	□□□□□ -1.62
DENND4C-208	ENST00000602708	SLC6A4	P31645	630 aa		4.96	□□□□□ -1.62
DENND4C-208	ENST00000602708	ZNF81	P51508	661 aa		4.96	□□□□□ -1.62
DENND4C-208	ENST00000602708	MAPK10	P53779	464 aa		4.96	□□□□□ -1.62
DENND4C-208	ENST00000602708	ATP8B2	P98198	1209 aa		4.96	□□□□□ -1.62
DENND4C-208	ENST00000602708	AKNAD1	Q5T1N1	836 aa		4.96	□□□□□ -1.62
DENND4C-208	ENST00000602708	FOXR2	Q6PJQ5	311 aa		4.96	□□□□□ -1.62
DENND4C-208	ENST00000602708	PEG10	Q86TG7	708 aa	Known RBP	4.96	□□□□□ -1.62
DENND4C-208	ENST00000602708	SMG7	Q92540	1137 aa	Known RBP	4.96	□□□□□ -1.62
DENND4C-208	ENST00000602708	DRC1	Q96MC2	740 aa		4.96	□□□□□ -1.62
DENND4C-208	ENST00000602708	UROC1	Q96N76	676 aa		4.96	□□□□□ -1.62
DENND4C-208	ENST00000602708	PEX1	O43933	1283 aa		4.95	□□□□□ -1.62
DENND4C-208	ENST00000602708	ZEB2	O60315	1214 aa		4.95	□□□□□ -1.62
DENND4C-208	ENST00000602708	GPR32	O75388	356 aa		4.95	□□□□□ -1.62
DENND4C-208	ENST00000602708	FOLR3	P41439	243 aa		4.95	□□□□□ -1.62
DENND4C-208	ENST00000602708	MALL	Q13021	153 aa		4.95	□□□□□ -1.62
DENND4C-208	ENST00000602708	TSHZ1	Q6ZSZ6	1077 aa		4.95	□□□□□ -1.62
DENND4C-208	ENST00000602708	DCBLD1	Q8N8Z6	715 aa		4.95	□□□□□ -1.62
DENND4C-208	ENST00000602708	TBC1D15	Q8TC07	691 aa		4.95	□□□□□ -1.62
DENND4C-208	ENST00000602708	CCHCR1	Q8TD31	782 aa		4.95	□□□□□ -1.62
DENND4C-208	ENST00000602708	TTC1	Q99614	292 aa		4.95	□□□□□ -1.62
DENND4C-208	ENST00000602708	TLR10	Q9BXR5	811 aa		4.95	□□□□□ -1.62
DENND4C-208	ENST00000602708	TMEM140	Q9NV12	185 aa		4.95	□□□□□ -1.62
DENND4C-208	ENST00000602708	DMTF1	Q9Y222	760 aa		4.95	□□□□□ -1.62
DENND4C-208	ENST00000602708	PCDHGA2	Q9Y5H1	932 aa		4.95	□□□□□ -1.62
DENND4C-208	ENST00000602708	ENTPD2	Q9Y5L3	495 aa		4.95	□□□□□ -1.62
DENND4C-208	ENST00000602708	TRGV11	A0A075B6L2	103 aa		4.94	□□□□□ -1.62
DENND4C-208	ENST00000602708	WDR91	A4D1P6	747 aa		4.94	□□□□□ -1.62
DENND4C-208	ENST00000602708	MANSC4	A6NHS7	340 aa	Predicted RBP	4.94	□□□□□ -1.62
DENND4C-208	ENST00000602708	YY2	O15391	372 aa		4.94	□□□□□ -1.62
DENND4C-208	ENST00000602708	GPR3	P46089	330 aa		4.94	□□□□□ -1.62
DENND4C-208	ENST00000602708	MGAT2	Q10469	447 aa		4.94	□□□□□ -1.62
DENND4C-208	ENST00000602708	VWA1	Q6PCB0	445 aa		4.94	□□□□□ -1.62
DENND4C-208	ENST00000602708	MICALCL	Q6ZW33	695 aa		4.94	□□□□□ -1.62
DENND4C-208	ENST00000602708	COLGALT2	Q8IYK4	626 aa		4.94	□□□□□ -1.62
DENND4C-208	ENST00000602708	FITM2	Q8N6M3	262 aa		4.94	□□□□□ -1.62
DENND4C-208	ENST00000602708	C9orf106	Q8NAJ2	232 aa		4.94	□□□□□ -1.62
DENND4C-208	ENST00000602708	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	4.94	□□□□□ -1.62
DENND4C-208	ENST00000602708	NUP133	Q8WUM0	1156 aa		4.94	□□□□□ -1.62
DENND4C-208	ENST00000602708	TFAP2B	Q92481	460 aa		4.94	□□□□□ -1.62
DENND4C-208	ENST00000602708	SARAF	Q96BY9	339 aa		4.94	□□□□□ -1.62
DENND4C-208	ENST00000602708	PNKP	Q96T60	521 aa		4.94	□□□□□ -1.62
DENND4C-208	ENST00000602708	TIMP4	Q99727	224 aa		4.94	□□□□□ -1.62
DENND4C-208	ENST00000602708	CPNE5	Q9HCH3	593 aa		4.94	□□□□□ -1.62
DENND4C-208	ENST00000602708	ADAM21	Q9UKJ8	722 aa		4.94	□□□□□ -1.62
DENND4C-208	ENST00000602708	APOBEC2	Q9Y235	224 aa	Known RBP	4.94	□□□□□ -1.62
DENND4C-208	ENST00000602708	KIAA0391	O15091	583 aa	Known RBP	4.93	□□□□□ -1.62
DENND4C-208	ENST00000602708	OSM	P13725	252 aa		4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms