RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 TBC1D16Q8TBP0 767 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 AIDAQ96BJ3 306 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 TNIP3Q96KP6 325 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 SDF4Q9BRK5 362 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 LRRC1Q9BTT6 524 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 IFIH1Q9BYX4 1025 aaKnown RBP9.36□□□□□ -0.91
COMMD3-215ENST00000602574 KCNN2Q9H2S1 579 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 THAP9Q9H5L6 903 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 LIN7BQ9HAP6 207 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 TRNAU1APQ9NX07 287 aaKnown RBP9.36□□□□□ -0.91
COMMD3-215ENST00000602574 STMN3Q9NZ72 180 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 RNF14Q9UBS8 474 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 B3GNT3Q9Y2A9 372 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 TRIM77I1YAP6 450 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 TRDMT1O14717 391 aaKnown RBP9.36□□□□□ -0.91
COMMD3-215ENST00000602574 SLC9A3R1O14745 358 aaPredicted RBP9.36□□□□□ -0.91
COMMD3-215ENST00000602574 DKC1O60832 514 aaKnown RBP eCLIP9.36□□□□□ -0.91
COMMD3-215ENST00000602574 PLEKHA8P1O95397 391 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 ATP1A1P05023 1023 aaKnown RBP9.36□□□□□ -0.91
COMMD3-215ENST00000602574 ZCCHC18P0CG32 403 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 AXLP30530 894 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 GPD2P43304 727 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 CLK3P49761 638 aaKnown RBP9.36□□□□□ -0.91
COMMD3-215ENST00000602574 COG7P83436 770 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 FCHO2Q0JRZ9 810 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 SIM2Q14190 667 aaPredicted RBP9.36□□□□□ -0.91
COMMD3-215ENST00000602574 SF3B4Q15427 424 aaKnown RBP eCLIP9.36□□□□□ -0.91
COMMD3-215ENST00000602574 KIAA1614Q5VZ46 1190 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 CCDC28AQ8IWP9 274 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 PJA1Q8NG27 643 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 DDI1Q8WTU0 396 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 CLPBQ9H078 707 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 DIABLOQ9NR28 239 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 ANGPTL2Q9UKU9 493 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 SOX13Q9UN79 622 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 PCDHGA3Q9Y5H0 932 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 PTPRMP28827 1452 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 KRBA1A5PL33 1030 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 LACTBL1A8MY62 500 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 APOL1O14791 398 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 TLR2O60603 784 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 SNRPAP09012 282 aaKnown RBP9.35□□□□□ -0.91
COMMD3-215ENST00000602574 PRKCAP17252 672 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 GRIA2P42262 883 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 EIF3BP55884 814 aaKnown RBP9.35□□□□□ -0.91
COMMD3-215ENST00000602574 GRIN1Q05586 938 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 ZNF844Q08AG5 666 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 C2orf54Q08AI8 447 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 MKRN3Q13064 507 aaKnown RBP9.35□□□□□ -0.91
COMMD3-215ENST00000602574 DSC3Q14574 896 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 Q3ZCU0 254 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 RBM44Q6ZP01 1051 aaKnown RBP9.35□□□□□ -0.91
COMMD3-215ENST00000602574 LIMS2Q7Z4I7 341 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 CROCCP2Q86T23 111 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 NOP9Q86U38 636 aaKnown RBP9.35□□□□□ -0.91
COMMD3-215ENST00000602574 FAM124AQ86V42 546 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 SATL1Q86VE3 508 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 LRRC34Q8IZ02 419 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 CHPFQ8IZ52 775 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 TSPYL6Q8N831 410 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 NRG4Q8WWG1 115 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 TSGA13Q96PP4 275 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 ELAC2Q9BQ52 826 aaKnown RBP9.35□□□□□ -0.91
COMMD3-215ENST00000602574 CCDC113Q9H0I3 377 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 EMILIN3Q9NT22 766 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 PRKAG3Q9UGI9 489 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 PGAP2Q9UHJ9 254 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 TMEM131LA2VDJ0 1609 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 A0A1B0GTH6 734 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 FAM172BPA6NC97 362 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 F8W810 466 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 H3BQV1 296 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 PDE2AO00408 941 aaPredicted RBP9.35□□□□□ -0.91
COMMD3-215ENST00000602574 FYB1O15117 783 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 SIN3BO75182 1162 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 ADD1P35611 737 aaKnown RBP9.35□□□□□ -0.91
COMMD3-215ENST00000602574 PBX1P40424 430 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 ETV1P50549 477 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 CYP4F2P78329 520 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 CYP4F3Q08477 520 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 NR1I3Q14994 352 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 ANKRD1Q15327 319 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 TXNRD1Q16881 649 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 EDRF1Q3B7T1 1238 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 ZNF829Q3KNS6 432 aaPredicted RBP9.35□□□□□ -0.91
COMMD3-215ENST00000602574 TIGD2Q4W5G0 525 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 ATG9AQ7Z3C6 839 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 GLRX5Q86SX6 157 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 FERMT3Q86UX7 667 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 ZNF677Q86XU0 584 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 CENPSQ8N2Z9 138 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 SPATA4Q8NEY3 305 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 RIN3Q8TB24 985 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 ENKURQ8TC29 256 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 HSPH1Q92598 858 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 DYDC2Q96IM9 177 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 TRIM8Q9BZR9 551 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 TRIM15Q9C019 465 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 RAD21L1Q9H4I0 556 aa9.35□□□□□ -0.91
COMMD3-215ENST00000602574 DENND2DQ9H6A0 471 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms