RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 SPIRE2Q8WWL2 714 aa19.52■□□□□ 0.72
SHKBP1-227ENST00000602011 KIFC3Q9BVG8 833 aa19.52■□□□□ 0.72
SHKBP1-227ENST00000602011 OXCT2Q9BYC2 517 aaPredicted RBP19.52■□□□□ 0.72
SHKBP1-227ENST00000602011 KCND2Q9NZV8 630 aa19.52■□□□□ 0.72
SHKBP1-227ENST00000602011 DNMT3BQ9UBC3 853 aaKnown RBP19.52■□□□□ 0.72
SHKBP1-227ENST00000602011 FBXO4Q9UKT5 387 aa19.52■□□□□ 0.72
SHKBP1-227ENST00000602011 MRPS17Q9Y2R5 130 aaKnown RBP19.52■□□□□ 0.72
SHKBP1-227ENST00000602011 CACNA1IQ9P0X4 2223 aa19.52■□□□□ 0.71
SHKBP1-227ENST00000602011 DNAH14Q0VDD8 3507 aa19.51■□□□□ 0.71
SHKBP1-227ENST00000602011 H0YCG3 227 aa19.51■□□□□ 0.71
SHKBP1-227ENST00000602011 LRG1P02750 347 aa19.51■□□□□ 0.71
SHKBP1-227ENST00000602011 EDN1P05305 212 aa19.51■□□□□ 0.71
SHKBP1-227ENST00000602011 SP9P0CG40 484 aa19.51■□□□□ 0.71
SHKBP1-227ENST00000602011 PROZP22891 400 aa19.51■□□□□ 0.71
SHKBP1-227ENST00000602011 STRN3Q13033 797 aa19.51■□□□□ 0.71
SHKBP1-227ENST00000602011 GLRA4Q5JXX5 417 aa19.51■□□□□ 0.71
SHKBP1-227ENST00000602011 TCEAL8Q8IYN2 117 aa19.51■□□□□ 0.71
SHKBP1-227ENST00000602011 APPL2Q8NEU8 664 aa19.51■□□□□ 0.71
SHKBP1-227ENST00000602011 HINFPQ9BQA5 517 aa19.51■□□□□ 0.71
SHKBP1-227ENST00000602011 CDT1Q9H211 546 aa19.51■□□□□ 0.71
SHKBP1-227ENST00000602011 CXCL16Q9H2A7 254 aa19.51■□□□□ 0.71
SHKBP1-227ENST00000602011 USP20Q9Y2K6 914 aa19.51■□□□□ 0.71
SHKBP1-227ENST00000602011 NUB1Q9Y5A7 615 aa19.51■□□□□ 0.71
SHKBP1-227ENST00000602011 GPR179Q6PRD1 2367 aa19.51■□□□□ 0.71
SHKBP1-227ENST00000602011 OTOGLQ3ZCN5 2332 aa19.51■□□□□ 0.71
SHKBP1-227ENST00000602011 PODXLO00592 558 aa19.5■□□□□ 0.71
SHKBP1-227ENST00000602011 TBC1D4O60343 1298 aa19.5■□□□□ 0.71
SHKBP1-227ENST00000602011 HIP1RO75146 1068 aa19.5■□□□□ 0.71
SHKBP1-227ENST00000602011 TOM1L1O75674 476 aa19.5■□□□□ 0.71
SHKBP1-227ENST00000602011 GUCY2CP25092 1073 aa19.5■□□□□ 0.71
SHKBP1-227ENST00000602011 TKTP29401 623 aaKnown RBP19.5■□□□□ 0.71
SHKBP1-227ENST00000602011 SNW1Q13573 536 aaKnown RBP19.5■□□□□ 0.71
SHKBP1-227ENST00000602011 MRPL58Q14197 206 aaKnown RBP19.5■□□□□ 0.71
SHKBP1-227ENST00000602011 RINT1Q6NUQ1 792 aa19.5■□□□□ 0.71
SHKBP1-227ENST00000602011 MPZL3Q6UWV2 235 aa19.5■□□□□ 0.71
SHKBP1-227ENST00000602011 C1orf186Q6ZWK4 172 aa19.5■□□□□ 0.71
SHKBP1-227ENST00000602011 NPAS3Q8IXF0 933 aa19.5■□□□□ 0.71
SHKBP1-227ENST00000602011 LEMD2Q8NC56 503 aa19.5■□□□□ 0.71
SHKBP1-227ENST00000602011 ITFG1Q8TB96 612 aa19.5■□□□□ 0.71
SHKBP1-227ENST00000602011 TSPAN18Q96SJ8 248 aa19.5■□□□□ 0.71
SHKBP1-227ENST00000602011 PLEKHA5Q9HAU0 1116 aa19.5■□□□□ 0.71
SHKBP1-227ENST00000602011 CNTN3Q9P232 1028 aa19.5■□□□□ 0.71
SHKBP1-227ENST00000602011 PRRG1O14668 218 aa19.49■□□□□ 0.71
SHKBP1-227ENST00000602011 SLC26A4O43511 780 aa19.49■□□□□ 0.71
SHKBP1-227ENST00000602011 RHOP08100 348 aa19.49■□□□□ 0.71
SHKBP1-227ENST00000602011 ROR1Q01973 937 aa19.49■□□□□ 0.71
SHKBP1-227ENST00000602011 KYAT1Q16773 422 aa19.49■□□□□ 0.71
SHKBP1-227ENST00000602011 RILPL1Q5EBL4 403 aa19.49■□□□□ 0.71
SHKBP1-227ENST00000602011 VARS2Q5ST30 1063 aaKnown RBP19.49■□□□□ 0.71
SHKBP1-227ENST00000602011 ZBTB41Q5SVQ8 909 aa19.49■□□□□ 0.71
SHKBP1-227ENST00000602011 ZPBP2Q6X784 338 aa19.49■□□□□ 0.71
SHKBP1-227ENST00000602011 ELMOD1Q8N336 334 aa19.49■□□□□ 0.71
SHKBP1-227ENST00000602011 ELSPBP1Q96BH3 223 aa19.49■□□□□ 0.71
SHKBP1-227ENST00000602011 TARS2Q9BW92 718 aaKnown RBP19.49■□□□□ 0.71
SHKBP1-227ENST00000602011 CEP250Q9BV73 2442 aa19.49■□□□□ 0.71
SHKBP1-227ENST00000602011 FAM170BA6NMN3 283 aa19.48■□□□□ 0.71
SHKBP1-227ENST00000602011 E9PMD0 336 aa19.48■□□□□ 0.71
SHKBP1-227ENST00000602011 LAMTOR5O43504 91 aa19.48■□□□□ 0.71
SHKBP1-227ENST00000602011 PAX3P23760 479 aa19.48■□□□□ 0.71
SHKBP1-227ENST00000602011 MARCKSP29966 332 aaPredicted RBP19.48■□□□□ 0.71
SHKBP1-227ENST00000602011 TOB1P50616 345 aaPredicted RBP19.48■□□□□ 0.71
SHKBP1-227ENST00000602011 HYIQ5T013 277 aa19.48■□□□□ 0.71
SHKBP1-227ENST00000602011 CYP4A22Q5TCH4 519 aa19.48■□□□□ 0.71
SHKBP1-227ENST00000602011 IQCEQ6IPM2 695 aa19.48■□□□□ 0.71
SHKBP1-227ENST00000602011 ZNF852Q6ZMS4 543 aa19.48■□□□□ 0.71
SHKBP1-227ENST00000602011 MAML2Q8IZL2 1156 aaPredicted RBP19.48■□□□□ 0.71
SHKBP1-227ENST00000602011 DAW1Q8N136 415 aa19.48■□□□□ 0.71
SHKBP1-227ENST00000602011 RUBCNQ92622 972 aa19.48■□□□□ 0.71
SHKBP1-227ENST00000602011 DNASE1L2Q92874 299 aa19.48■□□□□ 0.71
SHKBP1-227ENST00000602011 KCNN1Q92952 543 aa19.48■□□□□ 0.71
SHKBP1-227ENST00000602011 SUSD3Q96L08 255 aa19.48■□□□□ 0.71
SHKBP1-227ENST00000602011 POLD4Q9HCU8 107 aa19.48■□□□□ 0.71
SHKBP1-227ENST00000602011 MTF2Q9Y483 593 aaPredicted RBP19.48■□□□□ 0.71
SHKBP1-227ENST00000602011 PCDHB6Q9Y5E3 794 aa19.48■□□□□ 0.71
SHKBP1-227ENST00000602011 MYH15Q9Y2K3 1946 aa19.48■□□□□ 0.71
SHKBP1-227ENST00000602011 NCOR2Q9Y618 2525 aa19.47■□□□□ 0.71
SHKBP1-227ENST00000602011 MAN2B1O00754 1011 aa19.47■□□□□ 0.71
SHKBP1-227ENST00000602011 KINO60870 393 aaKnown RBP19.47■□□□□ 0.71
SHKBP1-227ENST00000602011 SEC24BO95487 1268 aa19.47■□□□□ 0.71
SHKBP1-227ENST00000602011 PLS3P13797 630 aa19.47■□□□□ 0.71
SHKBP1-227ENST00000602011 BRCC3P46736 316 aa19.47■□□□□ 0.71
SHKBP1-227ENST00000602011 RPS9P46781 194 aaKnown RBP19.47■□□□□ 0.71
SHKBP1-227ENST00000602011 SOX4Q06945 474 aaPredicted RBP19.47■□□□□ 0.71
SHKBP1-227ENST00000602011 ZNF280DQ6N043 979 aa19.47■□□□□ 0.71
SHKBP1-227ENST00000602011 GPR161Q8N6U8 529 aaKnown RBP19.47■□□□□ 0.71
SHKBP1-227ENST00000602011 CEP120Q8N960 986 aa19.47■□□□□ 0.71
SHKBP1-227ENST00000602011 SYT2Q8N9I0 419 aaPredicted RBP19.47■□□□□ 0.71
SHKBP1-227ENST00000602011 C3orf58Q8NDZ4 430 aa19.47■□□□□ 0.71
SHKBP1-227ENST00000602011 CLDN23Q96B33 292 aa19.47■□□□□ 0.71
SHKBP1-227ENST00000602011 ZNF512Q96ME7 567 aaPredicted RBP19.47■□□□□ 0.71
SHKBP1-227ENST00000602011 GPR88Q9GZN0 384 aa19.47■□□□□ 0.71
SHKBP1-227ENST00000602011 CYP4F11Q9HBI6 524 aa19.47■□□□□ 0.71
SHKBP1-227ENST00000602011 GOLGA2P5Q9HBQ8 144 aa19.47■□□□□ 0.71
SHKBP1-227ENST00000602011 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.47■□□□□ 0.71
SHKBP1-227ENST00000602011 HCFC1R1Q9NWW0 138 aa19.47■□□□□ 0.71
SHKBP1-227ENST00000602011 LARSQ9P2J5 1176 aaKnown RBP19.47■□□□□ 0.71
SHKBP1-227ENST00000602011 AFF4Q9UHB7 1163 aaKnown RBP19.47■□□□□ 0.71
SHKBP1-227ENST00000602011 SPTLC1O15269 473 aa19.46■□□□□ 0.71
SHKBP1-227ENST00000602011 CLDN3O15551 220 aa19.46■□□□□ 0.71
SHKBP1-227ENST00000602011 CD72P21854 359 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms