RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 C8AP07357 584 aa28.39■■■□□ 2.14
PNKP-216ENST00000601816 GBP2P32456 591 aaPredicted RBP28.39■■■□□ 2.14
PNKP-216ENST00000601816 NASPP49321 788 aaPredicted RBP28.39■■■□□ 2.14
PNKP-216ENST00000601816 PPP2R3AQ06190 1150 aa28.39■■■□□ 2.14
PNKP-216ENST00000601816 STK38Q15208 465 aa28.39■■■□□ 2.14
PNKP-216ENST00000601816 PPM1LQ5SGD2 360 aa28.39■■■□□ 2.14
PNKP-216ENST00000601816 CCDC73Q6ZRK6 1079 aa28.39■■■□□ 2.14
PNKP-216ENST00000601816 SV2BQ7L1I2 683 aa28.39■■■□□ 2.14
PNKP-216ENST00000601816 TUBGCP4Q9UGJ1 667 aa28.39■■■□□ 2.14
PNKP-216ENST00000601816 GTF3C5Q9Y5Q8 519 aaPredicted RBP28.39■■■□□ 2.14
PNKP-216ENST00000601816 CDY1Q9Y6F8 540 aa28.39■■■□□ 2.14
PNKP-216ENST00000601816 TTC26A0AVF1 554 aa28.38■■■□□ 2.13
PNKP-216ENST00000601816 SYN3O14994 580 aa28.38■■■□□ 2.13
PNKP-216ENST00000601816 HSP90AA1P07900 732 aaKnown RBP28.38■■■□□ 2.13
PNKP-216ENST00000601816 HNRNPA1P09651 372 aaKnown RBP eCLIP28.38■■■□□ 2.13
PNKP-216ENST00000601816 TNFSF9P41273 254 aa28.38■■■□□ 2.13
PNKP-216ENST00000601816 SFR1Q86XK3 245 aa28.38■■■□□ 2.13
PNKP-216ENST00000601816 FBXL6Q8N531 539 aa28.38■■■□□ 2.13
PNKP-216ENST00000601816 DDX12PQ92771 950 aa28.38■■■□□ 2.13
PNKP-216ENST00000601816 KIF12Q96FN5 646 aa28.38■■■□□ 2.13
PNKP-216ENST00000601816 MSTO1Q9BUK6 570 aa28.38■■■□□ 2.13
PNKP-216ENST00000601816 ST6GALNAC4Q9H4F1 302 aa28.38■■■□□ 2.13
PNKP-216ENST00000601816 RPF1Q9H9Y2 349 aaKnown RBP28.38■■■□□ 2.13
PNKP-216ENST00000601816 A0A0B4J269 797 aa28.37■■■□□ 2.13
PNKP-216ENST00000601816 HOXA9P31269 272 aa28.37■■■□□ 2.13
PNKP-216ENST00000601816 STAT6P42226 847 aa28.37■■■□□ 2.13
PNKP-216ENST00000601816 SPAG1Q07617 926 aa28.37■■■□□ 2.13
PNKP-216ENST00000601816 ZC2HC1CQ53FD0 456 aaPredicted RBP28.37■■■□□ 2.13
PNKP-216ENST00000601816 VARS2Q5ST30 1063 aaKnown RBP28.37■■■□□ 2.13
PNKP-216ENST00000601816 ZBTB41Q5SVQ8 909 aa28.37■■■□□ 2.13
PNKP-216ENST00000601816 RSPO2Q6UXX9 243 aaPredicted RBP28.37■■■□□ 2.13
PNKP-216ENST00000601816 ZNF396Q96N95 335 aaPredicted RBP28.37■■■□□ 2.13
PNKP-216ENST00000601816 KCNH6Q9H252 994 aa28.37■■■□□ 2.13
PNKP-216ENST00000601816 SMOC2Q9H3U7 446 aa28.37■■■□□ 2.13
PNKP-216ENST00000601816 MYMKA6NI61 221 aa28.36■■■□□ 2.13
PNKP-216ENST00000601816 FAM189A1O60320 539 aa28.36■■■□□ 2.13
PNKP-216ENST00000601816 N4BP1O75113 896 aaKnown RBP28.36■■■□□ 2.13
PNKP-216ENST00000601816 MCM4P33991 863 aa28.36■■■□□ 2.13
PNKP-216ENST00000601816 ENOX2Q16206 610 aaKnown RBP28.36■■■□□ 2.13
PNKP-216ENST00000601816 SLC39A4Q6P5W5 647 aa28.36■■■□□ 2.13
PNKP-216ENST00000601816 LINC00301Q8NCQ3 95 aa28.36■■■□□ 2.13
PNKP-216ENST00000601816 SLC7A14Q8TBB6 771 aa28.36■■■□□ 2.13
PNKP-216ENST00000601816 SUSD3Q96L08 255 aa28.36■■■□□ 2.13
PNKP-216ENST00000601816 SEL1LQ9UBV2 794 aa28.36■■■□□ 2.13
PNKP-216ENST00000601816 UBQLN1Q9UMX0 589 aaKnown RBP28.36■■■□□ 2.13
PNKP-216ENST00000601816 PDCD11Q14690 1871 aaKnown RBP28.36■■■□□ 2.13
PNKP-216ENST00000601816 LACTBL1A8MY62 500 aa28.35■■■□□ 2.13
PNKP-216ENST00000601816 XPOTO43592 962 aaKnown RBP28.35■■■□□ 2.13
PNKP-216ENST00000601816 GAP43P17677 238 aa28.35■■■□□ 2.13
PNKP-216ENST00000601816 AXDND1Q5T1B0 1012 aaPredicted RBP28.35■■■□□ 2.13
PNKP-216ENST00000601816 GET4Q7L5D6 327 aaPredicted RBP28.35■■■□□ 2.13
PNKP-216ENST00000601816 HVCN1Q96D96 273 aa28.35■■■□□ 2.13
PNKP-216ENST00000601816 MYADMQ96S97 322 aa28.35■■■□□ 2.13
PNKP-216ENST00000601816 PANK2Q9BZ23 570 aa28.35■■■□□ 2.13
PNKP-216ENST00000601816 IGSF9Q9P2J2 1179 aa28.35■■■□□ 2.13
PNKP-216ENST00000601816 EPS15L1Q9UBC2 864 aa28.35■■■□□ 2.13
PNKP-216ENST00000601816 H7C4K7 107 aa28.34■■■□□ 2.13
PNKP-216ENST00000601816 XYLBO75191 536 aa28.34■■■□□ 2.13
PNKP-216ENST00000601816 TDGQ13569 410 aa28.34■■■□□ 2.13
PNKP-216ENST00000601816 ZBTB6Q15916 424 aa28.34■■■□□ 2.13
PNKP-216ENST00000601816 UVSSAQ2YD98 709 aa28.34■■■□□ 2.13
PNKP-216ENST00000601816 SLC8B1Q6J4K2 584 aa28.34■■■□□ 2.13
PNKP-216ENST00000601816 ZNF720Q7Z2F6 126 aa28.34■■■□□ 2.13
PNKP-216ENST00000601816 GRASPQ7Z6J2 395 aaPredicted RBP28.34■■■□□ 2.13
PNKP-216ENST00000601816 DNAJC19Q96DA6 116 aa28.34■■■□□ 2.13
PNKP-216ENST00000601816 TSPAN18Q96SJ8 248 aa28.34■■■□□ 2.13
PNKP-216ENST00000601816 MRPL44Q9H9J2 332 aaKnown RBP28.34■■■□□ 2.13
PNKP-216ENST00000601816 KCNK12Q9HB15 430 aa28.34■■■□□ 2.13
PNKP-216ENST00000601816 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.34■■■□□ 2.13
PNKP-216ENST00000601816 TFIP11Q9UBB9 837 aaKnown RBP28.34■■■□□ 2.13
PNKP-216ENST00000601816 POLIQ9UNA4 740 aa28.34■■■□□ 2.13
PNKP-216ENST00000601816 GTF3C3Q9Y5Q9 886 aa28.34■■■□□ 2.13
PNKP-216ENST00000601816 MYO10Q9HD67 2058 aa28.34■■■□□ 2.13
PNKP-216ENST00000601816 A0A087X0B3 334 aa28.33■■■□□ 2.13
PNKP-216ENST00000601816 ANKRD63C9JTQ0 380 aa28.33■■■□□ 2.13
PNKP-216ENST00000601816 SPTLC2O15270 562 aa28.33■■■□□ 2.13
PNKP-216ENST00000601816 CCL16O15467 120 aa28.33■■■□□ 2.13
PNKP-216ENST00000601816 PDIA4P13667 645 aaKnown RBP28.33■■■□□ 2.13
PNKP-216ENST00000601816 CYP3A5P20815 502 aa28.33■■■□□ 2.13
PNKP-216ENST00000601816 LRPAP1P30533 357 aa28.33■■■□□ 2.13
PNKP-216ENST00000601816 ROR1Q01973 937 aa28.33■■■□□ 2.13
PNKP-216ENST00000601816 FOXD4L5Q5VV16 416 aaPredicted RBP28.33■■■□□ 2.13
PNKP-216ENST00000601816 SLFN12LQ6IEE8 588 aa28.33■■■□□ 2.13
PNKP-216ENST00000601816 RTL10Q7L3V2 364 aa28.33■■■□□ 2.13
PNKP-216ENST00000601816 CD302Q8IX05 232 aa28.33■■■□□ 2.13
PNKP-216ENST00000601816 APPL2Q8NEU8 664 aa28.33■■■□□ 2.13
PNKP-216ENST00000601816 FOXD4L4Q8WXT5 416 aaPredicted RBP28.33■■■□□ 2.13
PNKP-216ENST00000601816 FAM212AQ96EL1 285 aa28.33■■■□□ 2.13
PNKP-216ENST00000601816 CPSF3Q9UKF6 684 aaKnown RBP28.33■■■□□ 2.13
PNKP-216ENST00000601816 PPP6R2O75170 966 aa28.32■■■□□ 2.12
PNKP-216ENST00000601816 ADRB2P07550 413 aa28.32■■■□□ 2.12
PNKP-216ENST00000601816 POU2F2P09086 479 aa28.32■■■□□ 2.12
PNKP-216ENST00000601816 FSHRP23945 695 aa28.32■■■□□ 2.12
PNKP-216ENST00000601816 ADALQ6DHV7 355 aa28.32■■■□□ 2.12
PNKP-216ENST00000601816 PDILTQ8N807 584 aa28.32■■■□□ 2.12
PNKP-216ENST00000601816 PCDHB8Q9UN66 801 aa28.32■■■□□ 2.12
PNKP-216ENST00000601816 ZNF318Q5VUA4 2279 aa28.32■■■□□ 2.12
PNKP-216ENST00000601816 TISP43B9A030 160 aa28.31■■■□□ 2.12
PNKP-216ENST00000601816 PPP1R37O75864 691 aa28.31■■■□□ 2.12
PNKP-216ENST00000601816 YEATS4O95619 227 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms