RNA–Protein interactions for RNA: ENST00000601582.1

SYMPK-216, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 544 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-216ENST00000601582 SPECC1Q5M775 1068 aa12.76□□□□□ -0.37
SYMPK-216ENST00000601582 VARS2Q5ST30 1063 aaKnown RBP12.76□□□□□ -0.37
SYMPK-216ENST00000601582 CWF19L1Q69YN2 538 aaKnown RBP12.76□□□□□ -0.37
SYMPK-216ENST00000601582 ANKS3Q6ZW76 656 aa12.76□□□□□ -0.37
SYMPK-216ENST00000601582 USP49Q70CQ1 688 aa12.76□□□□□ -0.37
SYMPK-216ENST00000601582 SIX5Q8N196 739 aa12.76□□□□□ -0.37
SYMPK-216ENST00000601582 MYCT1Q8N699 235 aa12.76□□□□□ -0.37
SYMPK-216ENST00000601582 EPSTI1Q96J88 318 aa12.76□□□□□ -0.37
SYMPK-216ENST00000601582 HCFC1R1Q9NWW0 138 aa12.76□□□□□ -0.37
SYMPK-216ENST00000601582 DNMT3BQ9UBC3 853 aaKnown RBP12.76□□□□□ -0.37
SYMPK-216ENST00000601582 TUBGCP4Q9UGJ1 667 aa12.76□□□□□ -0.37
SYMPK-216ENST00000601582 FBXL21Q9UKT6 434 aa12.76□□□□□ -0.37
SYMPK-216ENST00000601582 ODF2LQ9ULJ1 636 aa12.76□□□□□ -0.37
SYMPK-216ENST00000601582 KRBA1A5PL33 1030 aa12.75□□□□□ -0.37
SYMPK-216ENST00000601582 ANHXE9PGG2 379 aa12.75□□□□□ -0.37
SYMPK-216ENST00000601582 SLC26A4O43511 780 aa12.75□□□□□ -0.37
SYMPK-216ENST00000601582 TBC1D4O60343 1298 aa12.75□□□□□ -0.37
SYMPK-216ENST00000601582 FAM13AO94988 1023 aa12.75□□□□□ -0.37
SYMPK-216ENST00000601582 BMP15O95972 392 aa12.75□□□□□ -0.37
SYMPK-216ENST00000601582 HOXA9P31269 272 aa12.75□□□□□ -0.37
SYMPK-216ENST00000601582 LONP1P36776 959 aaKnown RBP12.75□□□□□ -0.37
SYMPK-216ENST00000601582 CLCN5P51795 746 aa12.75□□□□□ -0.37
SYMPK-216ENST00000601582 ZNF131P52739 623 aa12.75□□□□□ -0.37
SYMPK-216ENST00000601582 ARPP19P56211 112 aa12.75□□□□□ -0.37
SYMPK-216ENST00000601582 ROR1Q01973 937 aa12.75□□□□□ -0.37
SYMPK-216ENST00000601582 HTR4Q13639 388 aa12.75□□□□□ -0.37
SYMPK-216ENST00000601582 PTPAQ15257 358 aa12.75□□□□□ -0.37
SYMPK-216ENST00000601582 UVSSAQ2YD98 709 aa12.75□□□□□ -0.37
SYMPK-216ENST00000601582 ZBTB41Q5SVQ8 909 aa12.75□□□□□ -0.37
SYMPK-216ENST00000601582 FAM173BQ6P4H8 233 aa12.75□□□□□ -0.37
SYMPK-216ENST00000601582 PARM1Q6UWI2 310 aa12.75□□□□□ -0.37
SYMPK-216ENST00000601582 ZNF461Q8TAF7 563 aa12.75□□□□□ -0.37
SYMPK-216ENST00000601582 ITFG1Q8TB96 612 aa12.75□□□□□ -0.37
SYMPK-216ENST00000601582 RAD54LQ92698 747 aa12.75□□□□□ -0.37
SYMPK-216ENST00000601582 ATOH1Q92858 354 aaPredicted RBP12.75□□□□□ -0.37
SYMPK-216ENST00000601582 FGF14Q92915 247 aa12.75□□□□□ -0.37
SYMPK-216ENST00000601582 NXPE3Q969Y0 559 aa12.75□□□□□ -0.37
SYMPK-216ENST00000601582 BICD1Q96G01 975 aa12.75□□□□□ -0.37
SYMPK-216ENST00000601582 WNT16Q9UBV4 365 aa12.75□□□□□ -0.37
SYMPK-216ENST00000601582 CDH7Q9ULB5 785 aa12.75□□□□□ -0.37
SYMPK-216ENST00000601582 TBX20Q9UMR3 447 aa12.75□□□□□ -0.37
SYMPK-216ENST00000601582 NUB1Q9Y5A7 615 aa12.75□□□□□ -0.37
SYMPK-216ENST00000601582 NUMBLQ9Y6R0 609 aa12.75□□□□□ -0.37
SYMPK-216ENST00000601582 TTC26A0AVF1 554 aa12.74□□□□□ -0.37
SYMPK-216ENST00000601582 WDR27A2RRH5 827 aa12.74□□□□□ -0.37
SYMPK-216ENST00000601582 H0YCG3 227 aa12.74□□□□□ -0.37
SYMPK-216ENST00000601582 K7ENM7 598 aa12.74□□□□□ -0.37
SYMPK-216ENST00000601582 SYN3O14994 580 aa12.74□□□□□ -0.37
SYMPK-216ENST00000601582 TRAK2O60296 914 aa12.74□□□□□ -0.37
SYMPK-216ENST00000601582 XYLBO75191 536 aa12.74□□□□□ -0.37
SYMPK-216ENST00000601582 ABLIM3O94929 683 aa12.74□□□□□ -0.37
SYMPK-216ENST00000601582 KRT18P05783 430 aaKnown RBP12.74□□□□□ -0.37
SYMPK-216ENST00000601582 SRFP11831 508 aa12.74□□□□□ -0.37
SYMPK-216ENST00000601582 SYT1P21579 422 aa12.74□□□□□ -0.37
SYMPK-216ENST00000601582 MARCKSP29966 332 aaPredicted RBP12.74□□□□□ -0.37
SYMPK-216ENST00000601582 NMT1P30419 496 aaKnown RBP12.74□□□□□ -0.37
SYMPK-216ENST00000601582 MCM4P33991 863 aa12.74□□□□□ -0.37
SYMPK-216ENST00000601582 DDIT3P35638 169 aa12.74□□□□□ -0.37
SYMPK-216ENST00000601582 NUBP1P53384 320 aa12.74□□□□□ -0.37
SYMPK-216ENST00000601582 MRPL58Q14197 206 aaKnown RBP12.74□□□□□ -0.37
SYMPK-216ENST00000601582 ZBTB6Q15916 424 aa12.74□□□□□ -0.37
SYMPK-216ENST00000601582 SLC8B1Q6J4K2 584 aa12.74□□□□□ -0.37
SYMPK-216ENST00000601582 RASSF8Q8NHQ8 419 aa12.74□□□□□ -0.37
SYMPK-216ENST00000601582 GPR152Q8TDT2 470 aa12.74□□□□□ -0.37
SYMPK-216ENST00000601582 FGF13Q92913 245 aa12.74□□□□□ -0.37
SYMPK-216ENST00000601582 KCNN1Q92952 543 aa12.74□□□□□ -0.37
SYMPK-216ENST00000601582 FIZ1Q96SL8 496 aa12.74□□□□□ -0.37
SYMPK-216ENST00000601582 CCSER1Q9C0I3 900 aa12.74□□□□□ -0.37
SYMPK-216ENST00000601582 ZHX3Q9H4I2 956 aa12.74□□□□□ -0.37
SYMPK-216ENST00000601582 PARVGQ9HBI0 331 aa12.74□□□□□ -0.37
SYMPK-216ENST00000601582 FBXL5Q9UKA1 691 aa12.74□□□□□ -0.37
SYMPK-216ENST00000601582 CA14Q9ULX7 337 aa12.74□□□□□ -0.37
SYMPK-216ENST00000601582 CACNA1HO95180 2353 aa12.73□□□□□ -0.37
SYMPK-216ENST00000601582 MYH15Q9Y2K3 1946 aa12.73□□□□□ -0.37
SYMPK-216ENST00000601582 LACTBL1A8MY62 500 aa12.73□□□□□ -0.37
SYMPK-216ENST00000601582 HNRNPDLO14979 420 aaKnown RBP12.73□□□□□ -0.37
SYMPK-216ENST00000601582 FAM189A1O60320 539 aa12.73□□□□□ -0.37
SYMPK-216ENST00000601582 SEC24AO95486 1093 aa12.73□□□□□ -0.37
SYMPK-216ENST00000601582 CLTAP09496 248 aa12.73□□□□□ -0.37
SYMPK-216ENST00000601582 AOC1P19801 751 aa12.73□□□□□ -0.37
SYMPK-216ENST00000601582 LIG4P49917 911 aa12.73□□□□□ -0.37
SYMPK-216ENST00000601582 GUCY2FP51841 1108 aa12.73□□□□□ -0.37
SYMPK-216ENST00000601582 CEBPZQ03701 1054 aaKnown RBP12.73□□□□□ -0.37
SYMPK-216ENST00000601582 RESTQ13127 1097 aa12.73□□□□□ -0.37
SYMPK-216ENST00000601582 CTXN3Q4LDR2 81 aa12.73□□□□□ -0.37
SYMPK-216ENST00000601582 PABPC1LQ4VXU2 614 aaKnown RBP12.73□□□□□ -0.37
SYMPK-216ENST00000601582 ZC2HC1CQ53FD0 456 aaPredicted RBP12.73□□□□□ -0.37
SYMPK-216ENST00000601582 SLC39A4Q6P5W5 647 aa12.73□□□□□ -0.37
SYMPK-216ENST00000601582 POTEHQ6S545 545 aa12.73□□□□□ -0.37
SYMPK-216ENST00000601582 ING5Q8WYH8 240 aa12.73□□□□□ -0.37
SYMPK-216ENST00000601582 LARP4BQ92615 738 aaKnown RBP12.73□□□□□ -0.37
SYMPK-216ENST00000601582 DDX12PQ92771 950 aa12.73□□□□□ -0.37
SYMPK-216ENST00000601582 KIF12Q96FN5 646 aa12.73□□□□□ -0.37
SYMPK-216ENST00000601582 SUSD3Q96L08 255 aa12.73□□□□□ -0.37
SYMPK-216ENST00000601582 CLIC6Q96NY7 704 aa12.73□□□□□ -0.37
SYMPK-216ENST00000601582 PLEKHA5Q9HAU0 1116 aa12.73□□□□□ -0.37
SYMPK-216ENST00000601582 FOXD4L1Q9NU39 408 aa12.73□□□□□ -0.37
SYMPK-216ENST00000601582 FBXO2Q9UK22 296 aaPredicted RBP12.73□□□□□ -0.37
SYMPK-216ENST00000601582 ZFP37Q9Y6Q3 630 aaPredicted RBP12.73□□□□□ -0.37
SYMPK-216ENST00000601582 A0A0B4J269 797 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms