RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 ZNF577Q9BSK1 485 aa12.83□□□□□ -0.36
SHANK2-218ENST00000601538 NUP85Q9BW27 656 aa12.83□□□□□ -0.36
SHANK2-218ENST00000601538 EMILIN3Q9NT22 766 aa12.83□□□□□ -0.36
SHANK2-218ENST00000601538 TMED5Q9Y3A6 229 aa12.83□□□□□ -0.36
SHANK2-218ENST00000601538 OLR1P78380 273 aa12.83□□□□□ -0.36
SHANK2-218ENST00000601538 POU5F1BQ06416 359 aa12.83□□□□□ -0.36
SHANK2-218ENST00000601538 DCAF15Q66K64 600 aa12.83□□□□□ -0.36
SHANK2-218ENST00000601538 PLOD1Q02809 727 aaPredicted RBP12.83□□□□□ -0.36
SHANK2-218ENST00000601538 GCKRQ14397 625 aa12.83□□□□□ -0.36
SHANK2-218ENST00000601538 RHOT1Q8IXI2 618 aa12.83□□□□□ -0.36
SHANK2-218ENST00000601538 SH3TC2Q8TF17 1288 aa12.83□□□□□ -0.36
SHANK2-218ENST00000601538 FOPNLQ96NB1 174 aa12.83□□□□□ -0.36
SHANK2-218ENST00000601538 ADAMTS1Q9UHI8 967 aa12.83□□□□□ -0.36
SHANK2-218ENST00000601538 COPAP53621 1224 aa12.83□□□□□ -0.36
SHANK2-218ENST00000601538 KCNB1Q14721 858 aa12.83□□□□□ -0.36
SHANK2-218ENST00000601538 MAPRE1Q15691 268 aaKnown RBP12.83□□□□□ -0.36
SHANK2-218ENST00000601538 TRIQKQ629K1 86 aa12.83□□□□□ -0.36
SHANK2-218ENST00000601538 RBM12BQ8IXT5 1001 aaKnown RBP12.83□□□□□ -0.36
SHANK2-218ENST00000601538 ADGRF5Q8IZF2 1346 aa12.83□□□□□ -0.36
SHANK2-218ENST00000601538 BEST2Q8NFU1 509 aa12.83□□□□□ -0.36
SHANK2-218ENST00000601538 TMA16Q96EY4 203 aaKnown RBP12.83□□□□□ -0.36
SHANK2-218ENST00000601538 SUGCTQ9HAC7 445 aa12.83□□□□□ -0.36
SHANK2-218ENST00000601538 MED26O95402 600 aa12.82□□□□□ -0.36
SHANK2-218ENST00000601538 CHRM1P11229 460 aaPredicted RBP12.82□□□□□ -0.36
SHANK2-218ENST00000601538 ZNF18P17022 549 aa12.82□□□□□ -0.36
SHANK2-218ENST00000601538 CALB2P22676 271 aa12.82□□□□□ -0.36
SHANK2-218ENST00000601538 PDIA2Q13087 525 aaKnown RBP12.82□□□□□ -0.36
SHANK2-218ENST00000601538 COG2Q14746 738 aa12.82□□□□□ -0.36
SHANK2-218ENST00000601538 FUKQ8N0W3 1084 aa12.82□□□□□ -0.36
SHANK2-218ENST00000601538 TGFBRAP1Q8WUH2 860 aa12.82□□□□□ -0.36
SHANK2-218ENST00000601538 POP5Q969H6 163 aaKnown RBP12.82□□□□□ -0.36
SHANK2-218ENST00000601538 CITO14578 2027 aa12.82□□□□□ -0.36
SHANK2-218ENST00000601538 SRP72O76094 671 aaKnown RBP12.82□□□□□ -0.36
SHANK2-218ENST00000601538 TRIM25Q14258 630 aaKnown RBP12.82□□□□□ -0.36
SHANK2-218ENST00000601538 RCN1Q15293 331 aa12.82□□□□□ -0.36
SHANK2-218ENST00000601538 KYNUQ16719 465 aa12.82□□□□□ -0.36
SHANK2-218ENST00000601538 OTUD5Q96G74 571 aa12.82□□□□□ -0.36
SHANK2-218ENST00000601538 SPATA2Q9UM82 520 aa12.82□□□□□ -0.36
SHANK2-218ENST00000601538 EVPLLA8MZ36 301 aa12.82□□□□□ -0.36
SHANK2-218ENST00000601538 TMEM35BQ8NCS4 154 aa12.82□□□□□ -0.36
SHANK2-218ENST00000601538 OTUD7AQ8TE49 926 aaPredicted RBP12.82□□□□□ -0.36
SHANK2-218ENST00000601538 ADD3Q9UEY8 706 aaKnown RBP12.82□□□□□ -0.36
SHANK2-218ENST00000601538 UBAP1LF5GYI3 381 aa12.82□□□□□ -0.36
SHANK2-218ENST00000601538 PTPN12Q05209 780 aaKnown RBP12.82□□□□□ -0.36
SHANK2-218ENST00000601538 EGFL8Q99944 293 aa12.82□□□□□ -0.36
SHANK2-218ENST00000601538 HMG20AQ9NP66 347 aa12.82□□□□□ -0.36
SHANK2-218ENST00000601538 MAP2K7O14733 419 aa12.82□□□□□ -0.36
SHANK2-218ENST00000601538 C11orf88Q6PI97 169 aa12.82□□□□□ -0.36
SHANK2-218ENST00000601538 ZFAND2BQ8WV99 257 aa12.82□□□□□ -0.36
SHANK2-218ENST00000601538 ADARP55265 1226 aaKnown RBP12.82□□□□□ -0.36
SHANK2-218ENST00000601538 ITGA1P56199 1179 aa12.82□□□□□ -0.36
SHANK2-218ENST00000601538 DLG4P78352 724 aa12.82□□□□□ -0.36
SHANK2-218ENST00000601538 NFRKBQ6P4R8 1299 aa12.82□□□□□ -0.36
SHANK2-218ENST00000601538 LRRC59Q96AG4 307 aaKnown RBP12.82□□□□□ -0.36
SHANK2-218ENST00000601538 HEXIM2Q96MH2 286 aaKnown RBP12.82□□□□□ -0.36
SHANK2-218ENST00000601538 CD248Q9HCU0 757 aa12.82□□□□□ -0.36
SHANK2-218ENST00000601538 C6orf203Q9P0P8 240 aaPredicted RBP12.82□□□□□ -0.36
SHANK2-218ENST00000601538 FBXL5Q9UKA1 691 aa12.82□□□□□ -0.36
SHANK2-218ENST00000601538 RNF17Q9BXT8 1623 aaKnown RBP12.82□□□□□ -0.36
SHANK2-218ENST00000601538 EXOSC4Q9NPD3 245 aaKnown RBP12.82□□□□□ -0.36
SHANK2-218ENST00000601538 CASS4Q9NQ75 786 aa12.82□□□□□ -0.36
SHANK2-218ENST00000601538 SAMSN1Q9NSI8 373 aaKnown RBP12.82□□□□□ -0.36
SHANK2-218ENST00000601538 SF3B1O75533 1304 aaKnown RBP eCLIP12.82□□□□□ -0.36
SHANK2-218ENST00000601538 MAP3K4Q9Y6R4 1608 aa12.81□□□□□ -0.36
SHANK2-218ENST00000601538 SLC26A4O43511 780 aa12.81□□□□□ -0.36
SHANK2-218ENST00000601538 CHN1P15882 459 aa12.81□□□□□ -0.36
SHANK2-218ENST00000601538 FCHO2Q0JRZ9 810 aa12.81□□□□□ -0.36
SHANK2-218ENST00000601538 STXBP2Q15833 593 aa12.81□□□□□ -0.36
SHANK2-218ENST00000601538 RWDD4Q6NW29 188 aaKnown RBP12.81□□□□□ -0.36
SHANK2-218ENST00000601538 ZNF554Q86TJ5 538 aa12.81□□□□□ -0.36
SHANK2-218ENST00000601538 FAM9CQ8IZT9 166 aa12.81□□□□□ -0.36
SHANK2-218ENST00000601538 SMCR8Q8TEV9 937 aaPredicted RBP12.81□□□□□ -0.36
SHANK2-218ENST00000601538 RMND5BQ96G75 393 aaPredicted RBP12.81□□□□□ -0.36
SHANK2-218ENST00000601538 FAR2Q96K12 515 aa12.81□□□□□ -0.36
SHANK2-218ENST00000601538 C20orf96Q9NUD7 363 aaPredicted RBP12.81□□□□□ -0.36
SHANK2-218ENST00000601538 ABCB11O95342 1321 aa12.81□□□□□ -0.36
SHANK2-218ENST00000601538 PDS5AQ29RF7 1337 aaKnown RBP12.81□□□□□ -0.36
SHANK2-218ENST00000601538 TRPC5OSA6NMA1 111 aa12.81□□□□□ -0.36
SHANK2-218ENST00000601538 RNMTO43148 476 aaKnown RBP12.81□□□□□ -0.36
SHANK2-218ENST00000601538 KLHL41O60662 606 aa12.81□□□□□ -0.36
SHANK2-218ENST00000601538 ATP6V1C1P21283 382 aa12.81□□□□□ -0.36
SHANK2-218ENST00000601538 TGFBR2P37173 567 aa12.81□□□□□ -0.36
SHANK2-218ENST00000601538 SPANXN2Q5MJ10 180 aa12.81□□□□□ -0.36
SHANK2-218ENST00000601538 CWF19L1Q69YN2 538 aaKnown RBP12.81□□□□□ -0.36
SHANK2-218ENST00000601538 PRPF39Q86UA1 669 aaKnown RBP12.81□□□□□ -0.36
SHANK2-218ENST00000601538 DRAXINQ8NBI3 349 aaPredicted RBP12.81□□□□□ -0.36
SHANK2-218ENST00000601538 RPF1Q9H9Y2 349 aaKnown RBP12.81□□□□□ -0.36
SHANK2-218ENST00000601538 KRT84Q9NSB2 600 aa12.81□□□□□ -0.36
SHANK2-218ENST00000601538 CCDC88AQ3V6T2 1871 aa12.81□□□□□ -0.36
SHANK2-218ENST00000601538 CD2BP2O95400 341 aaKnown RBP12.81□□□□□ -0.36
SHANK2-218ENST00000601538 PIK3R1P27986 724 aa12.81□□□□□ -0.36
SHANK2-218ENST00000601538 RNF219Q5W0B1 726 aaPredicted RBP12.81□□□□□ -0.36
SHANK2-218ENST00000601538 GALNT15Q8N3T1 639 aa12.81□□□□□ -0.36
SHANK2-218ENST00000601538 KRT35Q92764 455 aa12.81□□□□□ -0.36
SHANK2-218ENST00000601538 CASZ1Q86V15 1759 aa12.81□□□□□ -0.36
SHANK2-218ENST00000601538 CES2O00748 559 aa12.81□□□□□ -0.36
SHANK2-218ENST00000601538 GSTT1P30711 240 aa12.81□□□□□ -0.36
SHANK2-218ENST00000601538 MTHFSDQ2M296 383 aaKnown RBP12.81□□□□□ -0.36
SHANK2-218ENST00000601538 FANCAO15360 1455 aa12.81□□□□□ -0.36
SHANK2-218ENST00000601538 hCG_1642624A0A1W2PR95 340 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms