RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 C8AP07357 584 aa24.71■■□□□ 1.55
SSBP4-209ENST00000601357 TNFSF9P41273 254 aa24.71■■□□□ 1.55
SSBP4-209ENST00000601357 TDGQ13569 410 aa24.71■■□□□ 1.55
SSBP4-209ENST00000601357 IER5LQ5T953 404 aa24.71■■□□□ 1.55
SSBP4-209ENST00000601357 LIN9Q5TKA1 542 aa24.71■■□□□ 1.55
SSBP4-209ENST00000601357 SLC8B1Q6J4K2 584 aa24.71■■□□□ 1.55
SSBP4-209ENST00000601357 USP28Q96RU2 1077 aa24.71■■□□□ 1.55
SSBP4-209ENST00000601357 ZSCAN16Q9H4T2 348 aaPredicted RBP24.71■■□□□ 1.55
SSBP4-209ENST00000601357 FOXD4L1Q9NU39 408 aa24.71■■□□□ 1.55
SSBP4-209ENST00000601357 IGSF9Q9P2J2 1179 aa24.71■■□□□ 1.55
SSBP4-209ENST00000601357 TUBGCP4Q9UGJ1 667 aa24.71■■□□□ 1.55
SSBP4-209ENST00000601357 SYN3O14994 580 aa24.7■■□□□ 1.54
SSBP4-209ENST00000601357 TBC1D4O60343 1298 aa24.7■■□□□ 1.54
SSBP4-209ENST00000601357 TBCAO75347 108 aaKnown RBP24.7■■□□□ 1.54
SSBP4-209ENST00000601357 ADRB2P07550 413 aa24.7■■□□□ 1.54
SSBP4-209ENST00000601357 POU2F2P09086 479 aa24.7■■□□□ 1.54
SSBP4-209ENST00000601357 GBP2P32456 591 aaPredicted RBP24.7■■□□□ 1.54
SSBP4-209ENST00000601357 ABCD1P33897 745 aa24.7■■□□□ 1.54
SSBP4-209ENST00000601357 MATR3P43243 847 aaKnown RBP eCLIP24.7■■□□□ 1.54
SSBP4-209ENST00000601357 VCPP55072 806 aaKnown RBP24.7■■□□□ 1.54
SSBP4-209ENST00000601357 CEBPZQ03701 1054 aaKnown RBP24.7■■□□□ 1.54
SSBP4-209ENST00000601357 SLC39A14Q15043 492 aa24.7■■□□□ 1.54
SSBP4-209ENST00000601357 ZBTB6Q15916 424 aa24.7■■□□□ 1.54
SSBP4-209ENST00000601357 KYAT1Q16773 422 aa24.7■■□□□ 1.54
SSBP4-209ENST00000601357 SLC39A4Q6P5W5 647 aa24.7■■□□□ 1.54
SSBP4-209ENST00000601357 MAP4K3Q8IVH8 894 aa24.7■■□□□ 1.54
SSBP4-209ENST00000601357 SNX21Q969T3 373 aa24.7■■□□□ 1.54
SSBP4-209ENST00000601357 ST6GALNAC4Q9H4F1 302 aa24.7■■□□□ 1.54
SSBP4-209ENST00000601357 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.7■■□□□ 1.549e-7■■■■□ 19.7
SSBP4-209ENST00000601357 A0A0B4J269 797 aa24.69■■□□□ 1.54
SSBP4-209ENST00000601357 OGTO15294 1046 aa24.69■■□□□ 1.54
SSBP4-209ENST00000601357 NMT1P30419 496 aaKnown RBP24.69■■□□□ 1.54
SSBP4-209ENST00000601357 HOXD11P31277 338 aaPredicted RBP24.69■■□□□ 1.54
SSBP4-209ENST00000601357 MRPL58Q14197 206 aaKnown RBP24.69■■□□□ 1.54
SSBP4-209ENST00000601357 UVSSAQ2YD98 709 aa24.69■■□□□ 1.54
SSBP4-209ENST00000601357 PPM1LQ5SGD2 360 aa24.69■■□□□ 1.54
SSBP4-209ENST00000601357 VARS2Q5ST30 1063 aaKnown RBP24.69■■□□□ 1.54
SSBP4-209ENST00000601357 ZBTB41Q5SVQ8 909 aa24.69■■□□□ 1.54
SSBP4-209ENST00000601357 AXDND1Q5T1B0 1012 aaPredicted RBP24.69■■□□□ 1.54
SSBP4-209ENST00000601357 RTL10Q7L3V2 364 aa24.69■■□□□ 1.54
SSBP4-209ENST00000601357 SLC7A14Q8TBB6 771 aa24.69■■□□□ 1.54
SSBP4-209ENST00000601357 SUSD3Q96L08 255 aa24.69■■□□□ 1.54
SSBP4-209ENST00000601357 ZHX3Q9H4I2 956 aa24.69■■□□□ 1.54
SSBP4-209ENST00000601357 CCDC39Q9UFE4 941 aa24.69■■□□□ 1.54
SSBP4-209ENST00000601357 DUSP12Q9UNI6 340 aa24.69■■□□□ 1.54
SSBP4-209ENST00000601357 DOCK6Q96HP0 2047 aa24.69■■□□□ 1.54
SSBP4-209ENST00000601357 ZDBF2Q9HCK1 2354 aa24.68■■□□□ 1.54
SSBP4-209ENST00000601357 LRPAP1P30533 357 aa24.68■■□□□ 1.54
SSBP4-209ENST00000601357 NHLH1Q02575 133 aa24.68■■□□□ 1.54
SSBP4-209ENST00000601357 ENOX2Q16206 610 aaKnown RBP24.68■■□□□ 1.54
SSBP4-209ENST00000601357 GRASPQ7Z6J2 395 aaPredicted RBP24.68■■□□□ 1.54
SSBP4-209ENST00000601357 KRI1Q8N9T8 703 aaKnown RBP24.68■■□□□ 1.54
SSBP4-209ENST00000601357 PRSS33Q8NF86 280 aa24.68■■□□□ 1.54
SSBP4-209ENST00000601357 NUB1Q9Y5A7 615 aa24.68■■□□□ 1.54
SSBP4-209ENST00000601357 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.68■■□□□ 1.54
SSBP4-209ENST00000601357 ABLIM3O94929 683 aa24.67■■□□□ 1.54
SSBP4-209ENST00000601357 LAMP2P13473 410 aa24.67■■□□□ 1.54
SSBP4-209ENST00000601357 AVPR2P30518 371 aa24.67■■□□□ 1.54
SSBP4-209ENST00000601357 NASPP49321 788 aaPredicted RBP24.67■■□□□ 1.54
SSBP4-209ENST00000601357 ROR1Q01973 937 aa24.67■■□□□ 1.54
SSBP4-209ENST00000601357 SPAG1Q07617 926 aa24.67■■□□□ 1.54
SSBP4-209ENST00000601357 ZC2HC1CQ53FD0 456 aaPredicted RBP24.67■■□□□ 1.54
SSBP4-209ENST00000601357 RRAGBQ5VZM2 374 aa24.67■■□□□ 1.54
SSBP4-209ENST00000601357 GET4Q7L5D6 327 aaPredicted RBP24.67■■□□□ 1.54
SSBP4-209ENST00000601357 DYMQ7RTS9 669 aa24.67■■□□□ 1.54
SSBP4-209ENST00000601357 TMEM130Q8N3G9 435 aa24.67■■□□□ 1.54
SSBP4-209ENST00000601357 ZNF461Q8TAF7 563 aa24.67■■□□□ 1.54
SSBP4-209ENST00000601357 RSAD2Q8WXG1 361 aa24.67■■□□□ 1.54
SSBP4-209ENST00000601357 DDX12PQ92771 950 aa24.67■■□□□ 1.54
SSBP4-209ENST00000601357 NOTCH4Q99466 2003 aa24.66■■□□□ 1.54
SSBP4-209ENST00000601357 LACTBL1A8MY62 500 aa24.66■■□□□ 1.54
SSBP4-209ENST00000601357 CCL16O15467 120 aa24.66■■□□□ 1.54
SSBP4-209ENST00000601357 CYP3A5P20815 502 aa24.66■■□□□ 1.54
SSBP4-209ENST00000601357 FSHRP23945 695 aa24.66■■□□□ 1.54
SSBP4-209ENST00000601357 TXLNAP40222 546 aa24.66■■□□□ 1.54
SSBP4-209ENST00000601357 PPP2R3AQ06190 1150 aa24.66■■□□□ 1.54
SSBP4-209ENST00000601357 ZNF720Q7Z2F6 126 aa24.66■■□□□ 1.54
SSBP4-209ENST00000601357 SFR1Q86XK3 245 aa24.66■■□□□ 1.54
SSBP4-209ENST00000601357 NXPE3Q969Y0 559 aa24.66■■□□□ 1.54
SSBP4-209ENST00000601357 DNAJC19Q96DA6 116 aa24.66■■□□□ 1.54
SSBP4-209ENST00000601357 KIF12Q96FN5 646 aa24.66■■□□□ 1.54
SSBP4-209ENST00000601357 TSPAN18Q96SJ8 248 aa24.66■■□□□ 1.54
SSBP4-209ENST00000601357 PRRX2Q99811 253 aa24.66■■□□□ 1.54
SSBP4-209ENST00000601357 STRA6Q9BX79 667 aa24.66■■□□□ 1.54
SSBP4-209ENST00000601357 CPSF3Q9UKF6 684 aaKnown RBP24.66■■□□□ 1.54
SSBP4-209ENST00000601357 UBQLN1Q9UMX0 589 aaKnown RBP24.66■■□□□ 1.54
SSBP4-209ENST00000601357 STYXL1Q9Y6J8 313 aa24.66■■□□□ 1.54
SSBP4-209ENST00000601357 ZFP37Q9Y6Q3 630 aaPredicted RBP24.66■■□□□ 1.54
SSBP4-209ENST00000601357 ANK1P16157 1881 aa24.66■■□□□ 1.54
SSBP4-209ENST00000601357 A0A087X0B3 334 aa24.65■■□□□ 1.54
SSBP4-209ENST00000601357 WDR27A2RRH5 827 aa24.65■■□□□ 1.54
SSBP4-209ENST00000601357 MYMKA6NI61 221 aa24.65■■□□□ 1.54
SSBP4-209ENST00000601357 ANKRD63C9JTQ0 380 aa24.65■■□□□ 1.54
SSBP4-209ENST00000601357 ANHXE9PGG2 379 aa24.65■■□□□ 1.54
SSBP4-209ENST00000601357 XYLBO75191 536 aa24.65■■□□□ 1.54
SSBP4-209ENST00000601357 PPP1R37O75864 691 aa24.65■■□□□ 1.54
SSBP4-209ENST00000601357 MCM4P33991 863 aa24.65■■□□□ 1.54
SSBP4-209ENST00000601357 AARSP49588 968 aaKnown RBP eCLIP24.65■■□□□ 1.544e-6■■■■■ 38
SSBP4-209ENST00000601357 NTHL1P78549 312 aa24.65■■□□□ 1.54
SSBP4-209ENST00000601357 MSTO1Q9BUK6 570 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms