RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 PLEKHA4Q9H4M7 779 aa11.16□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 ARHGEF3Q9NR81 526 aa11.16□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 RXFP3Q9NSD7 469 aa11.16□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 SEMA4GQ9NTN9 838 aa11.16□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 HCFC1R1Q9NWW0 138 aa11.16□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 FBXO4Q9UKT5 387 aa11.16□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 MEFVO15553 781 aaPredicted RBP11.15□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 MARCH6O60337 910 aa11.15□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 BAG4O95429 457 aaKnown RBP11.15□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 GPC5P78333 572 aa11.15□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 GUCY1B3Q02153 619 aa11.15□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 SOX4Q06945 474 aaPredicted RBP11.15□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 FOXC1Q12948 553 aa11.15□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 PSMD5Q16401 504 aa11.15□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 FAM187BQ17R55 369 aa11.15□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 COL28A1Q2UY09 1125 aa11.15□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 C8orf34Q49A92 452 aa11.15□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 GLRA4Q5JXX5 417 aa11.15□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 FAM171A1Q5VUB5 890 aa11.15□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 CYP26C1Q6V0L0 522 aa11.15□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 GPR65Q8IYL9 337 aa11.15□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 CEP120Q8N960 986 aa11.15□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 KIF2CQ99661 725 aa11.15□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 NAP1L4Q99733 375 aaKnown RBP11.15□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 GOLGA2P5Q9HBQ8 144 aa11.15□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 SLC2A4RGQ9NR83 387 aa11.15□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.15□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 ZSCAN32Q9NX65 697 aa11.15□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 SSX2IPQ9Y2D8 614 aa11.15□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 MTF2Q9Y483 593 aaPredicted RBP11.15□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 DOPEY2Q9Y3R5 2298 aa11.15□□□□□ -0.62
MIA-RAB4B-201ENST00000600729 RELNP78509 3460 aa11.15□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 TSC2P49815 1807 aa11.14□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 I3L4J1 428 aa11.14□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 CCL16O15467 120 aa11.14□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 KCNK5O95279 499 aa11.14□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 C1RP00736 705 aa11.14□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 PRB1P04280 392 aa11.14□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 C8AP07357 584 aa11.14□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 XBP1P17861 261 aa11.14□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 MCM7P33993 719 aa11.14□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 NBR1Q14596 966 aa11.14□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 SLC5A9Q2M3M2 681 aa11.14□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 NT5DC1Q5TFE4 455 aa11.14□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 STAMQ92783 540 aa11.14□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 PRIMPOLQ96LW4 560 aa11.14□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 TTPALQ9BTX7 342 aa11.14□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 PIDD1Q9HB75 910 aa11.14□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 PRMT7Q9NVM4 692 aaPredicted RBP11.14□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 SIT1Q9Y3P8 196 aa11.14□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 SF3B1O75533 1304 aaKnown RBP eCLIP11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 KIF26AQ9ULI4 1882 aaPredicted RBP11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 TADA2AO75478 443 aa11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 PRKCBP05771 671 aa11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 ATP2B1P20020 1258 aa11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 FGFR3P22607 806 aa11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 FSHRP23945 695 aa11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 TKTP29401 623 aaKnown RBP11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 BRCC3P46736 316 aa11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 LIMK1P53667 647 aa11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 SRSF1Q07955 248 aaKnown RBP eCLIP11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 CSRP2Q16527 193 aa11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 LAIR1Q6GTX8 287 aa11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 PHLDB3Q6NSJ2 640 aa11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 TAS1R3Q7RTX0 852 aa11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 CEP57Q86XR8 500 aa11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 NPAS3Q8IXF0 933 aa11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 C4orf32Q8N8J7 132 aa11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 PJA1Q8NG27 643 aa11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 SLC7A14Q8TBB6 771 aa11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 FGF13Q92913 245 aa11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 DDX27Q96GQ7 796 aaKnown RBP11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 PPP1R10Q96QC0 940 aaKnown RBP11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 KXD1Q9BQD3 176 aa11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 DDX23Q9BUQ8 820 aaKnown RBP11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 PLA2G2FQ9BZM2 168 aa11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 TUFT1Q9NNX1 390 aa11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 FOXD4L1Q9NU39 408 aa11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 DNMT3BQ9UBC3 853 aaKnown RBP11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 CDH7Q9ULB5 785 aa11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 GDAQ9Y2T3 454 aa11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 RAI2Q9Y5P3 530 aa11.13□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 FBN2P35556 2912 aa11.12□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 NCANO14594 1321 aa11.12□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 N4BP3O15049 544 aa11.12□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 MAP3K13O43283 966 aa11.12□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 C1QL1O75973 258 aa11.12□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 TOP3BO95985 862 aaKnown RBP11.12□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 THP07101 528 aa11.12□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 XRCC6P12956 609 aaKnown RBP eCLIP11.12□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 LIG1P18858 919 aa11.12□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 CYP11B2P19099 503 aa11.12□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 CD72P21854 359 aa11.12□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 CLCNKBP51801 687 aa11.12□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 STARD6P59095 220 aa11.12□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 ANAPC15P60006 121 aa11.12□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 CSTF1Q05048 431 aaKnown RBP11.12□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 SNW1Q13573 536 aaKnown RBP11.12□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 LPAL2Q16609 132 aa11.12□□□□□ -0.63
MIA-RAB4B-201ENST00000600729 PSAPL1Q6NUJ1 521 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms