RNA–Protein interactions for RNA: ENST00000600380.1

FARP1-230, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-230ENST00000600380 LRRIQ3A6PVS8 624 aaPredicted RBP12.82□□□□□ -0.36
FARP1-230ENST00000600380 PODXLO00592 558 aa12.82□□□□□ -0.36
FARP1-230ENST00000600380 SPTLC1O15269 473 aa12.82□□□□□ -0.36
FARP1-230ENST00000600380 CSPG5O95196 566 aa12.82□□□□□ -0.36
FARP1-230ENST00000600380 RB1P06400 928 aa12.82□□□□□ -0.36
FARP1-230ENST00000600380 TRIM49P0CI25 452 aa12.82□□□□□ -0.36
FARP1-230ENST00000600380 TRIM49CP0CI26 452 aa12.82□□□□□ -0.36
FARP1-230ENST00000600380 DLATP10515 647 aaKnown RBP12.82□□□□□ -0.36
FARP1-230ENST00000600380 LRPAP1P30533 357 aa12.82□□□□□ -0.36
FARP1-230ENST00000600380 IRS1P35568 1242 aa12.82□□□□□ -0.36
FARP1-230ENST00000600380 ALDH7A1P49419 539 aaKnown RBP12.82□□□□□ -0.36
FARP1-230ENST00000600380 MCCD1P59942 119 aaPredicted RBP12.82□□□□□ -0.36
FARP1-230ENST00000600380 ERVFC1P60507 584 aa12.82□□□□□ -0.36
FARP1-230ENST00000600380 FKBP3Q00688 224 aaKnown RBP12.82□□□□□ -0.36
FARP1-230ENST00000600380 HSP90AA2PQ14568 343 aaPredicted RBP12.82□□□□□ -0.36
FARP1-230ENST00000600380 ZNF697Q5TEC3 545 aa12.82□□□□□ -0.36
FARP1-230ENST00000600380 FAM186BQ8IYM0 893 aa12.82□□□□□ -0.36
FARP1-230ENST00000600380 DEFB123Q8N688 67 aa12.82□□□□□ -0.36
FARP1-230ENST00000600380 C1orf127Q8N9H9 656 aa12.82□□□□□ -0.36
FARP1-230ENST00000600380 RSPH1Q8WYR4 309 aa12.82□□□□□ -0.36
FARP1-230ENST00000600380 ELMO3Q96BJ8 720 aa12.82□□□□□ -0.36
FARP1-230ENST00000600380 B3GALT6Q96L58 329 aa12.82□□□□□ -0.36
FARP1-230ENST00000600380 CGRRF1Q99675 332 aa12.82□□□□□ -0.36
FARP1-230ENST00000600380 TSG101Q99816 390 aa12.82□□□□□ -0.36
FARP1-230ENST00000600380 PLVAPQ9BX97 442 aa12.82□□□□□ -0.36
FARP1-230ENST00000600380 SRRTQ9BXP5 876 aaKnown RBP12.82□□□□□ -0.36
FARP1-230ENST00000600380 GPR62Q9BZJ7 368 aa12.82□□□□□ -0.36
FARP1-230ENST00000600380 MTMR12Q9C0I1 747 aa12.82□□□□□ -0.36
FARP1-230ENST00000600380 MTMR10Q9NXD2 777 aa12.82□□□□□ -0.36
FARP1-230ENST00000600380 UBQLN1Q9UMX0 589 aaKnown RBP12.82□□□□□ -0.36
FARP1-230ENST00000600380 DERAQ9Y315 318 aa12.82□□□□□ -0.36
FARP1-230ENST00000600380 C2CD2Q9Y426 696 aa12.82□□□□□ -0.36
FARP1-230ENST00000600380 PCDHB12Q9Y5F1 795 aa12.82□□□□□ -0.36
FARP1-230ENST00000600380 SCN1AP35498 2009 aa12.81□□□□□ -0.36
FARP1-230ENST00000600380 PLXNA4Q9HCM2 1894 aa12.81□□□□□ -0.36
FARP1-230ENST00000600380 ANO9A1A5B4 782 aa12.81□□□□□ -0.36
FARP1-230ENST00000600380 PIRO00625 290 aa12.81□□□□□ -0.36
FARP1-230ENST00000600380 CETN3O15182 167 aa12.81□□□□□ -0.36
FARP1-230ENST00000600380 LRRN2O75325 713 aa12.81□□□□□ -0.36
FARP1-230ENST00000600380 CYP3A5P20815 502 aa12.81□□□□□ -0.36
FARP1-230ENST00000600380 PTMSP20962 102 aa12.81□□□□□ -0.36
FARP1-230ENST00000600380 RPL13P26373 211 aaKnown RBP12.81□□□□□ -0.36
FARP1-230ENST00000600380 BRCC3P46736 316 aa12.81□□□□□ -0.36
FARP1-230ENST00000600380 CLDN10P78369 228 aa12.81□□□□□ -0.36
FARP1-230ENST00000600380 PLCB3Q01970 1234 aa12.81□□□□□ -0.36
FARP1-230ENST00000600380 PPP3CAQ08209 521 aa12.81□□□□□ -0.36
FARP1-230ENST00000600380 SKOR2Q2VWA4 1001 aaPredicted RBP12.81□□□□□ -0.36
FARP1-230ENST00000600380 ZSCAN23Q3MJ62 389 aa12.81□□□□□ -0.36
FARP1-230ENST00000600380 C9orf57Q5W0N0 161 aa12.81□□□□□ -0.36
FARP1-230ENST00000600380 GPR153Q6NV75 609 aa12.81□□□□□ -0.36
FARP1-230ENST00000600380 DCLRE1AQ6PJP8 1040 aa12.81□□□□□ -0.36
FARP1-230ENST00000600380 FOXR2Q6PJQ5 311 aa12.81□□□□□ -0.36
FARP1-230ENST00000600380 SASS6Q6UVJ0 657 aa12.81□□□□□ -0.36
FARP1-230ENST00000600380 RNF168Q8IYW5 571 aaPredicted RBP12.81□□□□□ -0.36
FARP1-230ENST00000600380 TMC2Q8TDI7 906 aa12.81□□□□□ -0.36
FARP1-230ENST00000600380 POF1BQ8WVV4 589 aa12.81□□□□□ -0.36
FARP1-230ENST00000600380 AUTS2Q8WXX7 1259 aa12.81□□□□□ -0.36
FARP1-230ENST00000600380 MYLIPQ8WY64 445 aa12.81□□□□□ -0.36
FARP1-230ENST00000600380 SAMD11Q96NU1 681 aa12.81□□□□□ -0.36
FARP1-230ENST00000600380 CDX2Q99626 313 aaPredicted RBP12.81□□□□□ -0.36
FARP1-230ENST00000600380 DNAJC25Q9H1X3 360 aa12.81□□□□□ -0.36
FARP1-230ENST00000600380 AAASQ9NRG9 546 aa12.81□□□□□ -0.36
FARP1-230ENST00000600380 SLC38A7Q9NVC3 462 aa12.81□□□□□ -0.36
FARP1-230ENST00000600380 DPP3Q9NY33 737 aa12.81□□□□□ -0.36
FARP1-230ENST00000600380 FRMD4BQ9Y2L6 1034 aa12.81□□□□□ -0.36
FARP1-230ENST00000600380 MAPK13O15264 365 aa12.8□□□□□ -0.36
FARP1-230ENST00000600380 B3GAT3O94766 335 aa12.8□□□□□ -0.36
FARP1-230ENST00000600380 VNN1O95497 513 aa12.8□□□□□ -0.36
FARP1-230ENST00000600380 CST3P01034 146 aaPredicted RBP12.8□□□□□ -0.36
FARP1-230ENST00000600380 C4BPAP04003 597 aaKnown RBP12.8□□□□□ -0.36
FARP1-230ENST00000600380 ERCC5P28715 1186 aaPredicted RBP12.8□□□□□ -0.36
FARP1-230ENST00000600380 RPL9P32969 192 aaKnown RBP12.8□□□□□ -0.36
FARP1-230ENST00000600380 PSMC2P35998 433 aaKnown RBP12.8□□□□□ -0.36
FARP1-230ENST00000600380 PPP1R2P41236 205 aa12.8□□□□□ -0.36
FARP1-230ENST00000600380 VAMP7P51809 220 aa12.8□□□□□ -0.36
FARP1-230ENST00000600380 STX1AQ16623 288 aa12.8□□□□□ -0.36
FARP1-230ENST00000600380 TIGD5Q53EQ6 642 aa12.8□□□□□ -0.36
FARP1-230ENST00000600380 TRAPPC11Q7Z392 1133 aa12.8□□□□□ -0.36
FARP1-230ENST00000600380 FILIP1Q7Z7B0 1213 aa12.8□□□□□ -0.36
FARP1-230ENST00000600380 DDX53Q86TM3 631 aaKnown RBP12.8□□□□□ -0.36
FARP1-230ENST00000600380 CSGALNACT2Q8N6G5 542 aa12.8□□□□□ -0.36
FARP1-230ENST00000600380 BEST2Q8NFU1 509 aa12.8□□□□□ -0.36
FARP1-230ENST00000600380 DDX27Q96GQ7 796 aaKnown RBP12.8□□□□□ -0.36
FARP1-230ENST00000600380 CEP63Q96MT8 703 aa12.8□□□□□ -0.36
FARP1-230ENST00000600380 TSPAN18Q96SJ8 248 aa12.8□□□□□ -0.36
FARP1-230ENST00000600380 C11orf84Q9BUA3 381 aaPredicted RBP12.8□□□□□ -0.36
FARP1-230ENST00000600380 COLEC11Q9BWP8 271 aa12.8□□□□□ -0.36
FARP1-230ENST00000600380 ANO10Q9NW15 660 aa12.8□□□□□ -0.36
FARP1-230ENST00000600380 RWDD3Q9Y3V2 267 aa12.8□□□□□ -0.36
FARP1-230ENST00000600380 COL4A4P53420 1690 aaPredicted RBP12.8□□□□□ -0.36
FARP1-230ENST00000600380 REV3LO60673 3130 aa12.79□□□□□ -0.36
FARP1-230ENST00000600380 BICDL2A1A5D9 508 aa12.79□□□□□ -0.36
FARP1-230ENST00000600380 TMEM189-UBE2V1I3L0A0 370 aa12.79□□□□□ -0.36
FARP1-230ENST00000600380 FSCN2O14926 492 aa12.79□□□□□ -0.36
FARP1-230ENST00000600380 SLC16A3O15427 465 aaKnown RBP12.79□□□□□ -0.36
FARP1-230ENST00000600380 TADA2AO75478 443 aa12.79□□□□□ -0.36
FARP1-230ENST00000600380 ITGB3P05106 788 aa12.79□□□□□ -0.36
FARP1-230ENST00000600380 TNNI1P19237 187 aa12.79□□□□□ -0.36
FARP1-230ENST00000600380 POLR2BP30876 1174 aaKnown RBP12.79□□□□□ -0.36
FARP1-230ENST00000600380 GCLMP48507 274 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms