RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 SMAD3P84022 425 aaKnown RBP21.65■■□□□ 1.06
SHKBP1-222ENST00000600320 ENPEPQ07075 957 aa21.65■■□□□ 1.06
SHKBP1-222ENST00000600320 DCAF17Q5H9S7 520 aaPredicted RBP21.65■■□□□ 1.06
SHKBP1-222ENST00000600320 SPOUT1Q5T280 376 aaKnown RBP21.65■■□□□ 1.06
SHKBP1-222ENST00000600320 CREBRFQ8IUR6 639 aa21.65■■□□□ 1.06
SHKBP1-222ENST00000600320 C1orf127Q8N9H9 656 aa21.65■■□□□ 1.06
SHKBP1-222ENST00000600320 BEST2Q8NFU1 509 aa21.65■■□□□ 1.06
SHKBP1-222ENST00000600320 FAM200AQ8TCP9 573 aa21.65■■□□□ 1.06
SHKBP1-222ENST00000600320 TMEM175Q9BSA9 504 aa21.65■■□□□ 1.06
SHKBP1-222ENST00000600320 MSRAQ9UJ68 235 aa21.65■■□□□ 1.06
SHKBP1-222ENST00000600320 SMTNL1A8MU46 457 aa21.64■■□□□ 1.05
SHKBP1-222ENST00000600320 NT5C1B-RDH14C9J2C7 533 aa21.64■■□□□ 1.05
SHKBP1-222ENST00000600320 F8W810 466 aa21.64■■□□□ 1.05
SHKBP1-222ENST00000600320 C4BPAP04003 597 aaKnown RBP21.64■■□□□ 1.05
SHKBP1-222ENST00000600320 TMEM191BP0C7N4 346 aa21.64■■□□□ 1.05
SHKBP1-222ENST00000600320 ZNF18P17022 549 aa21.64■■□□□ 1.05
SHKBP1-222ENST00000600320 CYP3A5P20815 502 aa21.64■■□□□ 1.05
SHKBP1-222ENST00000600320 DNAJB2P25686 324 aa21.64■■□□□ 1.05
SHKBP1-222ENST00000600320 LRPAP1P30533 357 aa21.64■■□□□ 1.05
SHKBP1-222ENST00000600320 OR1G1P47890 313 aa21.64■■□□□ 1.05
SHKBP1-222ENST00000600320 TAP1Q03518 808 aa21.64■■□□□ 1.05
SHKBP1-222ENST00000600320 DUOXA2Q1HG44 320 aa21.64■■□□□ 1.05
SHKBP1-222ENST00000600320 TMEM173Q86WV6 379 aaPredicted RBP21.64■■□□□ 1.05
SHKBP1-222ENST00000600320 COLGALT1Q8NBJ5 622 aa21.64■■□□□ 1.05
SHKBP1-222ENST00000600320 CXorf38Q8TB03 319 aa21.64■■□□□ 1.05
SHKBP1-222ENST00000600320 CLP1Q92989 425 aaKnown RBP21.64■■□□□ 1.05
SHKBP1-222ENST00000600320 SLC35C1Q96A29 364 aa21.64■■□□□ 1.05
SHKBP1-222ENST00000600320 MMRN2Q9H8L6 949 aa21.64■■□□□ 1.05
SHKBP1-222ENST00000600320 DPP3Q9NY33 737 aa21.64■■□□□ 1.05
SHKBP1-222ENST00000600320 SIX4Q9UIU6 781 aa21.64■■□□□ 1.05
SHKBP1-222ENST00000600320 PRG3Q9Y2Y8 225 aaPredicted RBP21.64■■□□□ 1.05
SHKBP1-222ENST00000600320 KCNJ18B7U540 433 aa21.63■■□□□ 1.05
SHKBP1-222ENST00000600320 NRP1O14786 923 aa21.63■■□□□ 1.05
SHKBP1-222ENST00000600320 XPOTO43592 962 aaKnown RBP21.63■■□□□ 1.05
SHKBP1-222ENST00000600320 CAVIN2O95810 425 aa21.63■■□□□ 1.05
SHKBP1-222ENST00000600320 LAG3P18627 525 aa21.63■■□□□ 1.05
SHKBP1-222ENST00000600320 GCLMP48507 274 aa21.63■■□□□ 1.05
SHKBP1-222ENST00000600320 CLCNKBP51801 687 aa21.63■■□□□ 1.05
SHKBP1-222ENST00000600320 KCNJ12Q14500 433 aa21.63■■□□□ 1.05
SHKBP1-222ENST00000600320 TCERG1LQ5VWI1 586 aa21.63■■□□□ 1.05
SHKBP1-222ENST00000600320 TDRD10Q5VZ19 366 aaKnown RBP21.63■■□□□ 1.05
SHKBP1-222ENST00000600320 KCNT2Q6UVM3 1135 aa21.63■■□□□ 1.05
SHKBP1-222ENST00000600320 CD300LGQ6UXG3 332 aa21.63■■□□□ 1.05
SHKBP1-222ENST00000600320 SV2AQ7L0J3 742 aa21.63■■□□□ 1.05
SHKBP1-222ENST00000600320 TRAPPC11Q7Z392 1133 aa21.63■■□□□ 1.05
SHKBP1-222ENST00000600320 GAS2L3Q86XJ1 694 aa21.63■■□□□ 1.05
SHKBP1-222ENST00000600320 FAM114A1Q8IWE2 563 aa21.63■■□□□ 1.05
SHKBP1-222ENST00000600320 CACTINQ8WUQ7 758 aaKnown RBP21.63■■□□□ 1.05
SHKBP1-222ENST00000600320 BCL7CQ8WUZ0 217 aaPredicted RBP21.63■■□□□ 1.05
SHKBP1-222ENST00000600320 ANKRD36BP1Q96IX9 119 aa21.63■■□□□ 1.05
SHKBP1-222ENST00000600320 C17orf80Q9BSJ5 609 aa21.63■■□□□ 1.05
SHKBP1-222ENST00000600320 MARCH5Q9NX47 278 aa21.63■■□□□ 1.05
SHKBP1-222ENST00000600320 MAGEC2Q9UBF1 373 aaPredicted RBP21.63■■□□□ 1.05
SHKBP1-222ENST00000600320 ANO9A1A5B4 782 aa21.62■■□□□ 1.05
SHKBP1-222ENST00000600320 BECN2A8MW95 431 aa21.62■■□□□ 1.05
SHKBP1-222ENST00000600320 SOX1O00570 391 aaPredicted RBP21.62■■□□□ 1.05
SHKBP1-222ENST00000600320 PODXLO00592 558 aa21.62■■□□□ 1.05
SHKBP1-222ENST00000600320 TNNC2P02585 160 aa21.62■■□□□ 1.05
SHKBP1-222ENST00000600320 ITGB3P05106 788 aa21.62■■□□□ 1.05
SHKBP1-222ENST00000600320 MTIF2P46199 727 aaKnown RBP21.62■■□□□ 1.05
SHKBP1-222ENST00000600320 UPP1Q16831 310 aa21.62■■□□□ 1.05
SHKBP1-222ENST00000600320 TCP11X2Q5H9J9 407 aa21.62■■□□□ 1.05
SHKBP1-222ENST00000600320 C9orf57Q5W0N0 161 aa21.62■■□□□ 1.05
SHKBP1-222ENST00000600320 C15orf39Q6ZRI6 1047 aa21.62■■□□□ 1.05
SHKBP1-222ENST00000600320 SLC39A11Q8N1S5 342 aa21.62■■□□□ 1.05
SHKBP1-222ENST00000600320 RNF214Q8ND24 703 aa21.62■■□□□ 1.05
SHKBP1-222ENST00000600320 C3orf58Q8NDZ4 430 aa21.62■■□□□ 1.05
SHKBP1-222ENST00000600320 TIFAQ96CG3 184 aa21.62■■□□□ 1.05
SHKBP1-222ENST00000600320 ZNF558Q96NG5 402 aa21.62■■□□□ 1.05
SHKBP1-222ENST00000600320 FAN1Q9Y2M0 1017 aa21.62■■□□□ 1.05
SHKBP1-222ENST00000600320 RANBP2P49792 3224 aaKnown RBP21.61■■□□□ 1.05
SHKBP1-222ENST00000600320 PIRO00625 290 aa21.61■■□□□ 1.05
SHKBP1-222ENST00000600320 KIF4AO95239 1232 aa21.61■■□□□ 1.05
SHKBP1-222ENST00000600320 ALDH2P05091 517 aa21.61■■□□□ 1.05
SHKBP1-222ENST00000600320 ITGB1P05556 798 aa21.61■■□□□ 1.05
SHKBP1-222ENST00000600320 ATP1A3P13637 1013 aa21.61■■□□□ 1.05
SHKBP1-222ENST00000600320 POLR2BP30876 1174 aaKnown RBP21.61■■□□□ 1.05
SHKBP1-222ENST00000600320 ZACNQ401N2 412 aa21.61■■□□□ 1.05
SHKBP1-222ENST00000600320 CBWD6Q4V339 395 aa21.61■■□□□ 1.05
SHKBP1-222ENST00000600320 CBWD3Q5JTY5 395 aa21.61■■□□□ 1.05
SHKBP1-222ENST00000600320 CBWD5Q5RIA9 395 aa21.61■■□□□ 1.05
SHKBP1-222ENST00000600320 USP37Q86T82 979 aa21.61■■□□□ 1.05
SHKBP1-222ENST00000600320 HASPINQ8TF76 798 aa21.61■■□□□ 1.05
SHKBP1-222ENST00000600320 DDX27Q96GQ7 796 aaKnown RBP21.61■■□□□ 1.05
SHKBP1-222ENST00000600320 UROC1Q96N76 676 aa21.61■■□□□ 1.05
SHKBP1-222ENST00000600320 TAB2Q9NYJ8 693 aa21.61■■□□□ 1.05
SHKBP1-222ENST00000600320 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.61■■□□□ 1.05
SHKBP1-222ENST00000600320 NLRC5Q86WI3 1866 aa21.6■■□□□ 1.05
SHKBP1-222ENST00000600320 VNN1O95497 513 aa21.6■■□□□ 1.05
SHKBP1-222ENST00000600320 CST3P01034 146 aaPredicted RBP21.6■■□□□ 1.05
SHKBP1-222ENST00000600320 EEF1GP26641 437 aaKnown RBP21.6■■□□□ 1.05
SHKBP1-222ENST00000600320 GTF2H1P32780 548 aa21.6■■□□□ 1.05
SHKBP1-222ENST00000600320 RPL9P32969 192 aaKnown RBP21.6■■□□□ 1.05
SHKBP1-222ENST00000600320 CTNNB1P35222 781 aa21.6■■□□□ 1.05
SHKBP1-222ENST00000600320 BMPR1AP36894 532 aa21.6■■□□□ 1.05
SHKBP1-222ENST00000600320 AP3M2P53677 418 aa21.6■■□□□ 1.05
SHKBP1-222ENST00000600320 ERVK-21P61565 698 aa21.6■■□□□ 1.05
SHKBP1-222ENST00000600320 KCNH2Q12809 1159 aa21.6■■□□□ 1.05
SHKBP1-222ENST00000600320 BIRC3Q13489 604 aa21.6■■□□□ 1.05
SHKBP1-222ENST00000600320 PPP2R2DQ66LE6 453 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms