RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 IKBKBO14920 756 aa18.06■□□□□ 0.48
USHBP1-210ENST00000600286 PHACTR2O75167 634 aa18.06■□□□□ 0.48
USHBP1-210ENST00000600286 TADA2AO75478 443 aa18.06■□□□□ 0.48
USHBP1-210ENST00000600286 DDHD2O94830 711 aa18.06■□□□□ 0.48
USHBP1-210ENST00000600286 GALTP07902 379 aa18.06■□□□□ 0.48
USHBP1-210ENST00000600286 PAX3P23760 479 aa18.06■□□□□ 0.48
USHBP1-210ENST00000600286 ERVK-21P61565 698 aa18.06■□□□□ 0.48
USHBP1-210ENST00000600286 TPM4P67936 248 aa18.06■□□□□ 0.48
USHBP1-210ENST00000600286 TAP1Q03518 808 aa18.06■□□□□ 0.48
USHBP1-210ENST00000600286 DSC1Q08554 894 aa18.06■□□□□ 0.48
USHBP1-210ENST00000600286 TCERG1LQ5VWI1 586 aa18.06■□□□□ 0.48
USHBP1-210ENST00000600286 DCLRE1AQ6PJP8 1040 aa18.06■□□□□ 0.48
USHBP1-210ENST00000600286 ZC3H3Q8IXZ2 948 aaKnown RBP18.06■□□□□ 0.48
USHBP1-210ENST00000600286 FBXO22Q8NEZ5 403 aa18.06■□□□□ 0.48
USHBP1-210ENST00000600286 PARD3BQ8TEW8 1205 aa18.06■□□□□ 0.48
USHBP1-210ENST00000600286 MYLIPQ8WY64 445 aa18.06■□□□□ 0.48
USHBP1-210ENST00000600286 EEF2KMTQ96G04 330 aa18.06■□□□□ 0.48
USHBP1-210ENST00000600286 TMEM169Q96HH4 297 aa18.06■□□□□ 0.48
USHBP1-210ENST00000600286 CGRRF1Q99675 332 aa18.06■□□□□ 0.48
USHBP1-210ENST00000600286 C11orf84Q9BUA3 381 aaPredicted RBP18.06■□□□□ 0.48
USHBP1-210ENST00000600286 THAP9Q9H5L6 903 aa18.06■□□□□ 0.48
USHBP1-210ENST00000600286 DPP3Q9NY33 737 aa18.06■□□□□ 0.48
USHBP1-210ENST00000600286 CUL9Q8IWT3 2517 aa18.05■□□□□ 0.48
USHBP1-210ENST00000600286 CASTOR2A6NHX0 329 aa18.05■□□□□ 0.48
USHBP1-210ENST00000600286 NRP1O14786 923 aa18.05■□□□□ 0.48
USHBP1-210ENST00000600286 TRAPPC3O43617 180 aa18.05■□□□□ 0.48
USHBP1-210ENST00000600286 TPM2P07951 284 aa18.05■□□□□ 0.48
USHBP1-210ENST00000600286 NFICP08651 508 aa18.05■□□□□ 0.48
USHBP1-210ENST00000600286 BFSP1Q12934 665 aa18.05■□□□□ 0.48
USHBP1-210ENST00000600286 GRIN2CQ14957 1233 aa18.05■□□□□ 0.48
USHBP1-210ENST00000600286 ZBTB6Q15916 424 aa18.05■□□□□ 0.48
USHBP1-210ENST00000600286 EPC2Q52LR7 807 aa18.05■□□□□ 0.48
USHBP1-210ENST00000600286 ANKRD20A12PQ8NF67 263 aa18.05■□□□□ 0.48
USHBP1-210ENST00000600286 C18orf25Q96B23 403 aaPredicted RBP18.05■□□□□ 0.48
USHBP1-210ENST00000600286 INTS13Q9NVM9 706 aa18.05■□□□□ 0.48
USHBP1-210ENST00000600286 DNAJB4Q9UDY4 337 aa18.05■□□□□ 0.48
USHBP1-210ENST00000600286 ITGA11Q9UKX5 1188 aa18.05■□□□□ 0.48
USHBP1-210ENST00000600286 MTUS1Q9ULD2 1270 aa18.05■□□□□ 0.48
USHBP1-210ENST00000600286 PLAGL2Q9UPG8 496 aa18.05■□□□□ 0.48
USHBP1-210ENST00000600286 PRG3Q9Y2Y8 225 aaPredicted RBP18.05■□□□□ 0.48
USHBP1-210ENST00000600286 NUB1Q9Y5A7 615 aa18.05■□□□□ 0.48
USHBP1-210ENST00000600286 B3GAT3O94766 335 aa18.04■□□□□ 0.48
USHBP1-210ENST00000600286 LRPAP1P30533 357 aa18.04■□□□□ 0.48
USHBP1-210ENST00000600286 GTF2H1P32780 548 aa18.04■□□□□ 0.48
USHBP1-210ENST00000600286 SLC11A1P49279 550 aa18.04■□□□□ 0.48
USHBP1-210ENST00000600286 ZNF165P49910 485 aa18.04■□□□□ 0.48
USHBP1-210ENST00000600286 RBP5P82980 135 aa18.04■□□□□ 0.48
USHBP1-210ENST00000600286 MYL5Q02045 173 aa18.04■□□□□ 0.48
USHBP1-210ENST00000600286 CETN1Q12798 172 aa18.04■□□□□ 0.48
USHBP1-210ENST00000600286 BIRC3Q13489 604 aa18.04■□□□□ 0.48
USHBP1-210ENST00000600286 TRPC3Q13507 836 aa18.04■□□□□ 0.48
USHBP1-210ENST00000600286 ARNTL2Q8WYA1 636 aa18.04■□□□□ 0.48
USHBP1-210ENST00000600286 BPIFA3Q9BQP9 254 aa18.04■□□□□ 0.48
USHBP1-210ENST00000600286 C17orf80Q9BSJ5 609 aa18.04■□□□□ 0.48
USHBP1-210ENST00000600286 ZNF576Q9H609 170 aa18.04■□□□□ 0.48
USHBP1-210ENST00000600286 NFE2L3Q9Y4A8 694 aa18.04■□□□□ 0.48
USHBP1-210ENST00000600286 XIRP2A4UGR9 3374 aa18.04■□□□□ 0.48
USHBP1-210ENST00000600286 ARHGEF37A1IGU5 675 aa18.03■□□□□ 0.48
USHBP1-210ENST00000600286 DLL1O00548 723 aa18.03■□□□□ 0.48
USHBP1-210ENST00000600286 PODXLO00592 558 aa18.03■□□□□ 0.48
USHBP1-210ENST00000600286 CLSTN1O94985 981 aa18.03■□□□□ 0.48
USHBP1-210ENST00000600286 KRT19P08727 400 aa18.03■□□□□ 0.48
USHBP1-210ENST00000600286 CDK11BP21127 795 aaKnown RBP18.03■□□□□ 0.48
USHBP1-210ENST00000600286 PNPLA4P41247 253 aa18.03■□□□□ 0.48
USHBP1-210ENST00000600286 MTIF2P46199 727 aaKnown RBP18.03■□□□□ 0.48
USHBP1-210ENST00000600286 ELAVL2Q12926 359 aaKnown RBP18.03■□□□□ 0.48
USHBP1-210ENST00000600286 MYO1EQ12965 1108 aa18.03■□□□□ 0.48
USHBP1-210ENST00000600286 DCAF17Q5H9S7 520 aaPredicted RBP18.03■□□□□ 0.48
USHBP1-210ENST00000600286 C11orf57Q6ZUT1 292 aaPredicted RBP18.03■□□□□ 0.48
USHBP1-210ENST00000600286 EFCAB13Q8IY85 973 aa18.03■□□□□ 0.48
USHBP1-210ENST00000600286 CCDC150Q8NCX0 1101 aa18.03■□□□□ 0.48
USHBP1-210ENST00000600286 ZNF560Q96MR9 790 aa18.03■□□□□ 0.48
USHBP1-210ENST00000600286 CXCL16Q9H2A7 254 aa18.03■□□□□ 0.48
USHBP1-210ENST00000600286 TUBGCP4Q9UGJ1 667 aa18.03■□□□□ 0.48
USHBP1-210ENST00000600286 LRRIQ3A6PVS8 624 aaPredicted RBP18.02■□□□□ 0.48
USHBP1-210ENST00000600286 NT5C1B-RDH14C9J2C7 533 aa18.02■□□□□ 0.48
USHBP1-210ENST00000600286 C5orf67F2Z3F1 127 aa18.02■□□□□ 0.48
USHBP1-210ENST00000600286 MEFVO15553 781 aaPredicted RBP18.02■□□□□ 0.48
USHBP1-210ENST00000600286 FGF18O76093 207 aa18.02■□□□□ 0.48
USHBP1-210ENST00000600286 PRKCSHP14314 528 aaPredicted RBP18.02■□□□□ 0.48
USHBP1-210ENST00000600286 CLCNKBP51801 687 aa18.02■□□□□ 0.48
USHBP1-210ENST00000600286 PLCB3Q01970 1234 aa18.02■□□□□ 0.48
USHBP1-210ENST00000600286 UBE3AQ05086 875 aa18.02■□□□□ 0.48
USHBP1-210ENST00000600286 GPM6BQ13491 265 aa18.02■□□□□ 0.48
USHBP1-210ENST00000600286 NAB2Q15742 525 aa18.02■□□□□ 0.48
USHBP1-210ENST00000600286 UPP1Q16831 310 aa18.02■□□□□ 0.48
USHBP1-210ENST00000600286 LMBRD2Q68DH5 695 aaPredicted RBP18.02■□□□□ 0.48
USHBP1-210ENST00000600286 LRSAM1Q6UWE0 723 aa18.02■□□□□ 0.48
USHBP1-210ENST00000600286 TRAPPC11Q7Z392 1133 aa18.02■□□□□ 0.48
USHBP1-210ENST00000600286 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.02■□□□□ 0.48
USHBP1-210ENST00000600286 SLC39A11Q8N1S5 342 aa18.02■□□□□ 0.48
USHBP1-210ENST00000600286 KLHL23Q8NBE8 558 aa18.02■□□□□ 0.48
USHBP1-210ENST00000600286 IGSF21Q96ID5 467 aa18.02■□□□□ 0.48
USHBP1-210ENST00000600286 CNOT6LQ96LI5 555 aaKnown RBP18.02■□□□□ 0.48
USHBP1-210ENST00000600286 POP1Q99575 1024 aaKnown RBP18.02■□□□□ 0.48
USHBP1-210ENST00000600286 MTMR12Q9C0I1 747 aa18.02■□□□□ 0.48
USHBP1-210ENST00000600286 TSPY26PQ9H489 355 aa18.02■□□□□ 0.48
USHBP1-210ENST00000600286 CERS4Q9HA82 394 aa18.02■□□□□ 0.48
USHBP1-210ENST00000600286 GOLGA2P5Q9HBQ8 144 aa18.02■□□□□ 0.48
USHBP1-210ENST00000600286 HCSTQ9UBK5 93 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms