RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 LIG4P49917 911 aa17.24■□□□□ 0.35
VRK3-221ENST00000600284 CLCN5P51795 746 aa17.24■□□□□ 0.35
VRK3-221ENST00000600284 VCPP55072 806 aaKnown RBP17.24■□□□□ 0.35
VRK3-221ENST00000600284 MRPL58Q14197 206 aaKnown RBP17.24■□□□□ 0.35
VRK3-221ENST00000600284 DHX8Q14562 1220 aaKnown RBP17.24■□□□□ 0.35
VRK3-221ENST00000600284 ZNF461Q8TAF7 563 aa17.24■□□□□ 0.35
VRK3-221ENST00000600284 C18orf25Q96B23 403 aaPredicted RBP17.24■□□□□ 0.35
VRK3-221ENST00000600284 SUSD3Q96L08 255 aa17.24■□□□□ 0.35
VRK3-221ENST00000600284 HAPLN2Q9GZV7 340 aa17.24■□□□□ 0.35
VRK3-221ENST00000600284 CCDC39Q9UFE4 941 aa17.24■□□□□ 0.35
VRK3-221ENST00000600284 CLIC4Q9Y696 253 aa17.24■□□□□ 0.35
VRK3-221ENST00000600284 ZDBF2Q9HCK1 2354 aa17.24■□□□□ 0.35
VRK3-221ENST00000600284 VWA8A3KMH1 1905 aa17.23■□□□□ 0.35
VRK3-221ENST00000600284 TTC26A0AVF1 554 aa17.23■□□□□ 0.35
VRK3-221ENST00000600284 I3L4J1 428 aa17.23■□□□□ 0.35
VRK3-221ENST00000600284 K7ENM7 598 aa17.23■□□□□ 0.35
VRK3-221ENST00000600284 HNRNPDLO14979 420 aaKnown RBP17.23■□□□□ 0.35
VRK3-221ENST00000600284 TBC1D4O60343 1298 aa17.23■□□□□ 0.35
VRK3-221ENST00000600284 TBCAO75347 108 aaKnown RBP17.23■□□□□ 0.35
VRK3-221ENST00000600284 ADRB2P07550 413 aa17.23■□□□□ 0.35
VRK3-221ENST00000600284 CYP3A5P20815 502 aa17.23■□□□□ 0.35
VRK3-221ENST00000600284 FSHRP23945 695 aa17.23■□□□□ 0.35
VRK3-221ENST00000600284 GTF2BQ00403 316 aa17.23■□□□□ 0.35
VRK3-221ENST00000600284 RESTQ13127 1097 aa17.23■□□□□ 0.35
VRK3-221ENST00000600284 SEZ6Q53EL9 994 aa17.23■□□□□ 0.35
VRK3-221ENST00000600284 VARS2Q5ST30 1063 aaKnown RBP17.23■□□□□ 0.35
VRK3-221ENST00000600284 ASTLQ6HA08 431 aaPredicted RBP17.23■□□□□ 0.35
VRK3-221ENST00000600284 RSPO2Q6UXX9 243 aaPredicted RBP17.23■□□□□ 0.35
VRK3-221ENST00000600284 GRASPQ7Z6J2 395 aaPredicted RBP17.23■□□□□ 0.35
VRK3-221ENST00000600284 CD302Q8IX05 232 aa17.23■□□□□ 0.35
VRK3-221ENST00000600284 SLC44A3Q8N4M1 653 aa17.23■□□□□ 0.35
VRK3-221ENST00000600284 KRI1Q8N9T8 703 aaKnown RBP17.23■□□□□ 0.35
VRK3-221ENST00000600284 SLC7A14Q8TBB6 771 aa17.23■□□□□ 0.35
VRK3-221ENST00000600284 EPSTI1Q96J88 318 aa17.23■□□□□ 0.35
VRK3-221ENST00000600284 FIZ1Q96SL8 496 aa17.23■□□□□ 0.35
VRK3-221ENST00000600284 MFSD1Q9H3U5 465 aa17.23■□□□□ 0.35
VRK3-221ENST00000600284 ST6GALNAC4Q9H4F1 302 aa17.23■□□□□ 0.35
VRK3-221ENST00000600284 ZSCAN16Q9H4T2 348 aaPredicted RBP17.23■□□□□ 0.35
VRK3-221ENST00000600284 WNT16Q9UBV4 365 aa17.23■□□□□ 0.35
VRK3-221ENST00000600284 STK17AQ9UEE5 414 aa17.23■□□□□ 0.35
VRK3-221ENST00000600284 CITO14578 2027 aa17.22■□□□□ 0.35
VRK3-221ENST00000600284 ANHXE9PGG2 379 aa17.22■□□□□ 0.35
VRK3-221ENST00000600284 OGTO15294 1046 aa17.22■□□□□ 0.35
VRK3-221ENST00000600284 XPOTO43592 962 aaKnown RBP17.22■□□□□ 0.35
VRK3-221ENST00000600284 ABLIM3O94929 683 aa17.22■□□□□ 0.35
VRK3-221ENST00000600284 CXCL8P10145 99 aa17.22■□□□□ 0.35
VRK3-221ENST00000600284 LRPAP1P30533 357 aa17.22■□□□□ 0.35
VRK3-221ENST00000600284 PPP2R3AQ06190 1150 aa17.22■□□□□ 0.35
VRK3-221ENST00000600284 TCF15Q12870 199 aa17.22■□□□□ 0.35
VRK3-221ENST00000600284 ZBTB6Q15916 424 aa17.22■□□□□ 0.35
VRK3-221ENST00000600284 GET4Q7L5D6 327 aaPredicted RBP17.22■□□□□ 0.35
VRK3-221ENST00000600284 MAP4K3Q8IVH8 894 aa17.22■□□□□ 0.35
VRK3-221ENST00000600284 APPL2Q8NEU8 664 aa17.22■□□□□ 0.35
VRK3-221ENST00000600284 FBXO2Q9UK22 296 aaPredicted RBP17.22■□□□□ 0.35
VRK3-221ENST00000600284 CDH7Q9ULB5 785 aa17.22■□□□□ 0.35
VRK3-221ENST00000600284 MAFFQ9ULX9 164 aa17.22■□□□□ 0.35
VRK3-221ENST00000600284 UBQLN1Q9UMX0 589 aaKnown RBP17.22■□□□□ 0.35
VRK3-221ENST00000600284 KMT2EQ8IZD2 1858 aa17.21■□□□□ 0.35
VRK3-221ENST00000600284 A0A0B4J269 797 aa17.21■□□□□ 0.35
VRK3-221ENST00000600284 ARHGEF37A1IGU5 675 aa17.21■□□□□ 0.35
VRK3-221ENST00000600284 K7ELQ4 463 aaPredicted RBP17.21■□□□□ 0.35
VRK3-221ENST00000600284 CCL16O15467 120 aa17.21■□□□□ 0.35
VRK3-221ENST00000600284 FAM189A1O60320 539 aa17.21■□□□□ 0.35
VRK3-221ENST00000600284 SRFP11831 508 aa17.21■□□□□ 0.35
VRK3-221ENST00000600284 ATF2P15336 505 aa17.21■□□□□ 0.35
VRK3-221ENST00000600284 MARCKSP29966 332 aaPredicted RBP17.21■□□□□ 0.35
VRK3-221ENST00000600284 ELF1P32519 619 aa17.21■□□□□ 0.35
VRK3-221ENST00000600284 MCM4P33991 863 aa17.21■□□□□ 0.35
VRK3-221ENST00000600284 TXLNAP40222 546 aa17.21■□□□□ 0.35
VRK3-221ENST00000600284 ROR1Q01973 937 aa17.21■□□□□ 0.35
VRK3-221ENST00000600284 TPGS2Q68CL5 300 aa17.21■□□□□ 0.35
VRK3-221ENST00000600284 ALYREFQ86V81 257 aaKnown RBP17.21■□□□□ 0.35
VRK3-221ENST00000600284 RSAD2Q8WXG1 361 aa17.21■□□□□ 0.35
VRK3-221ENST00000600284 KIF12Q96FN5 646 aa17.21■□□□□ 0.35
VRK3-221ENST00000600284 OXCT2Q9BYC2 517 aaPredicted RBP17.21■□□□□ 0.35
VRK3-221ENST00000600284 ZHX3Q9H4I2 956 aa17.21■□□□□ 0.35
VRK3-221ENST00000600284 RPF1Q9H9Y2 349 aaKnown RBP17.21■□□□□ 0.35
VRK3-221ENST00000600284 FBXL21Q9UKT6 434 aa17.21■□□□□ 0.35
VRK3-221ENST00000600284 KCNH3Q9ULD8 1083 aa17.21■□□□□ 0.35
VRK3-221ENST00000600284 POLIQ9UNA4 740 aa17.21■□□□□ 0.35
VRK3-221ENST00000600284 WDFY4Q6ZS81 3184 aa17.21■□□□□ 0.35
VRK3-221ENST00000600284 LACTBL1A8MY62 500 aa17.2■□□□□ 0.34
VRK3-221ENST00000600284 M0QZQ0 153 aa17.2■□□□□ 0.34
VRK3-221ENST00000600284 GALR2O43603 387 aaPredicted RBP17.2■□□□□ 0.34
VRK3-221ENST00000600284 PAX3P23760 479 aa17.2■□□□□ 0.34
VRK3-221ENST00000600284 TNFSF9P41273 254 aa17.2■□□□□ 0.34
VRK3-221ENST00000600284 MRE11P49959 708 aa17.2■□□□□ 0.34
VRK3-221ENST00000600284 POU5F1Q01860 360 aaKnown RBP17.2■□□□□ 0.34
VRK3-221ENST00000600284 HTR4Q13639 388 aa17.2■□□□□ 0.34
VRK3-221ENST00000600284 SLC39A14Q15043 492 aa17.2■□□□□ 0.34
VRK3-221ENST00000600284 SPECC1Q5M775 1068 aa17.2■□□□□ 0.34
VRK3-221ENST00000600284 RRAGBQ5VZM2 374 aa17.2■□□□□ 0.34
VRK3-221ENST00000600284 SLFN12LQ6IEE8 588 aa17.2■□□□□ 0.34
VRK3-221ENST00000600284 ZNF280DQ6N043 979 aa17.2■□□□□ 0.34
VRK3-221ENST00000600284 USP49Q70CQ1 688 aa17.2■□□□□ 0.34
VRK3-221ENST00000600284 TCEAL8Q8IYN2 117 aa17.2■□□□□ 0.34
VRK3-221ENST00000600284 AVENQ9NQS1 362 aaPredicted RBP17.2■□□□□ 0.34
VRK3-221ENST00000600284 DNMT3BQ9UBC3 853 aaKnown RBP17.2■□□□□ 0.34
VRK3-221ENST00000600284 SEL1LQ9UBV2 794 aa17.2■□□□□ 0.34
VRK3-221ENST00000600284 TUBGCP4Q9UGJ1 667 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms