RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 PRR5-ARHGAP8B1AHC4 643 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 ARNTLO00327 626 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 ABLIM1O14639 778 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 NCAM2O15394 837 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 HRO43593 1189 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 LARGE1O95461 756 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 VNN2O95498 520 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 CHRNB1P11230 501 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 ATF2P15336 505 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 XBP1P17861 261 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 SDHBP21912 280 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 RPA1P27694 616 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 NAMPTP43490 491 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 EPHA5P54756 1037 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 ARHGAP8P85298 464 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 ME3Q16798 604 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 GLRA4Q5JXX5 417 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 PADI6Q6TGC4 694 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 VITQ6UXI7 678 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 ANKS3Q6ZW76 656 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 TAS1R3Q7RTX0 852 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 ZBTB8OSQ8IWT0 167 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 HS6ST3Q8IZP7 471 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 DAW1Q8N136 415 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 C4orf32Q8N8J7 132 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 CEP120Q8N960 986 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 NECAB1Q8N987 351 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 NSUN7Q8NE18 718 aaKnown RBP6.73□□□□□ -1.33
VRK3-220ENST00000600259 DNASE1L2Q92874 299 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 ASB16Q96NS5 453 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 NACC1Q96RE7 527 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 ACO2Q99798 780 aaKnown RBP6.73□□□□□ -1.33
VRK3-220ENST00000600259 RTKNQ9BST9 563 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 LRRC3Q9BY71 257 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 C2orf40Q9H1Z8 148 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 LMAN1LQ9HAT1 526 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 TRPV4Q9HBA0 871 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 ZNF334Q9HCZ1 680 aaPredicted RBP6.73□□□□□ -1.33
VRK3-220ENST00000600259 CEP72Q9P209 647 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 NCDNQ9UBB6 729 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 DAXXQ9UER7 740 aaPredicted RBP6.73□□□□□ -1.33
VRK3-220ENST00000600259 VWA8A3KMH1 1905 aa6.73□□□□□ -1.33
VRK3-220ENST00000600259 TDRD15B5MCY1 1934 aaKnown RBP6.73□□□□□ -1.33
VRK3-220ENST00000600259 CNOT1A5YKK6 2376 aaKnown RBP6.73□□□□□ -1.33
VRK3-220ENST00000600259 MYH15Q9Y2K3 1946 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 ARID2Q68CP9 1835 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 MAN2B1O00754 1011 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 TM4SF5O14894 197 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 TRAPPC3O43617 180 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 NEMFO60524 1076 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 ADRB1P08588 477 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 KCNE1P15382 129 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 PROZP22891 400 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 HOXC13P31276 330 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 GRM5P41594 1212 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 EFNA5P52803 228 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 MLLT6P55198 1093 aaPredicted RBP6.72□□□□□ -1.33
VRK3-220ENST00000600259 LMNB2Q03252 620 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 DMWDQ09019 674 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 ST3GAL1Q11201 340 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 GRM2Q14416 872 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 DCAF4L1Q3SXM0 396 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 ATF7IP2Q5U623 682 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 DIS3L2Q8IYB7 885 aaKnown RBP6.72□□□□□ -1.33
VRK3-220ENST00000600259 CELF5Q8N6W0 485 aaKnown RBP6.72□□□□□ -1.33
VRK3-220ENST00000600259 BEST2Q8NFU1 509 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 RSPRY1Q96DX4 576 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 UROC1Q96N76 676 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 LRRC3BQ96PB8 259 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 CORO1BQ9BR76 489 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 ADPGKQ9BRR6 497 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 KIFC3Q9BVG8 833 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 TRMT61BQ9BVS5 477 aaKnown RBP6.72□□□□□ -1.33
VRK3-220ENST00000600259 CDT1Q9H211 546 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 ZFP14Q9HCL3 533 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 C2orf42Q9NWW7 574 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 FBXL5Q9UKA1 691 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 TNFSF13BQ9Y275 285 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 MRPS17Q9Y2R5 130 aaKnown RBP6.72□□□□□ -1.33
VRK3-220ENST00000600259 ZFHX4Q86UP3 3567 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 CEP295Q9C0D2 2601 aa6.72□□□□□ -1.33
VRK3-220ENST00000600259 PATJQ8NI35 1801 aa6.71□□□□□ -1.33
VRK3-220ENST00000600259 CFAP47Q6ZTR5 3102 aa6.71□□□□□ -1.34
VRK3-220ENST00000600259 K7ERI5 159 aa6.71□□□□□ -1.34
VRK3-220ENST00000600259 K7ESF4 209 aa6.71□□□□□ -1.34
VRK3-220ENST00000600259 ZNF197O14709 1029 aa6.71□□□□□ -1.34
VRK3-220ENST00000600259 SLC30A4O14863 429 aa6.71□□□□□ -1.34
VRK3-220ENST00000600259 SYN3O14994 580 aa6.71□□□□□ -1.34
VRK3-220ENST00000600259 JAK2O60674 1132 aa6.71□□□□□ -1.34
VRK3-220ENST00000600259 PAPSS2O95340 614 aaPredicted RBP6.71□□□□□ -1.34
VRK3-220ENST00000600259 RETP07949 1114 aa6.71□□□□□ -1.34
VRK3-220ENST00000600259 GJA1P17302 382 aa6.71□□□□□ -1.34
VRK3-220ENST00000600259 PSMC3P17980 439 aa6.71□□□□□ -1.34
VRK3-220ENST00000600259 LIG1P18858 919 aa6.71□□□□□ -1.34
VRK3-220ENST00000600259 MUTP22033 750 aa6.71□□□□□ -1.34
VRK3-220ENST00000600259 GDI1P31150 447 aa6.71□□□□□ -1.34
VRK3-220ENST00000600259 RPL9P32969 192 aaKnown RBP6.71□□□□□ -1.34
VRK3-220ENST00000600259 MCM7P33993 719 aa6.71□□□□□ -1.34
VRK3-220ENST00000600259 VIPR2P41587 438 aa6.71□□□□□ -1.34
VRK3-220ENST00000600259 SATB1Q01826 763 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms